RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ZNF131P52739 623 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 NCKAP1LP55160 1127 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 GIT2Q14161 759 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 ZNF568Q3ZCX4 644 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 RRAGBQ5VZM2 374 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 MYCT1Q8N699 235 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 VN1R2Q8NFZ6 395 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 AUTS2Q8WXX7 1259 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 MSLNLQ96KJ4 702 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 COLEC11Q9BWP8 271 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 CDT1Q9H211 546 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 PARVGQ9HBI0 331 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 PTPRHQ9HD43 1115 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 MARCH5Q9NX47 278 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 CD207Q9UJ71 328 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 IRAK3Q9Y616 596 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-231ENST00000641939 PTGESO14684 152 aa16.49■□□□□ 0.23
PHGDH-231ENST00000641939 PPP6R2O75170 966 aa16.49■□□□□ 0.23
PHGDH-231ENST00000641939 TBCAO75347 108 aaKnown RBP16.49■□□□□ 0.23
PHGDH-231ENST00000641939 YEATS4O95619 227 aa16.49■□□□□ 0.23
PHGDH-231ENST00000641939 THP07101 528 aa16.49■□□□□ 0.23
PHGDH-231ENST00000641939 SRGAP2BP0DMP2 458 aa16.49■□□□□ 0.23
PHGDH-231ENST00000641939 PROZP22891 400 aa16.49■□□□□ 0.23
PHGDH-231ENST00000641939 RBM10P98175 930 aaKnown RBP16.49■□□□□ 0.23
PHGDH-231ENST00000641939 COASYQ13057 564 aa16.49■□□□□ 0.23
PHGDH-231ENST00000641939 SMAD4Q13485 552 aaKnown RBP16.49■□□□□ 0.23
PHGDH-231ENST00000641939 KCNC3Q14003 757 aa16.49■□□□□ 0.23
PHGDH-231ENST00000641939 PDCD11Q14690 1871 aaKnown RBP16.49■□□□□ 0.23
PHGDH-231ENST00000641939 MPZL3Q6UWV2 235 aa16.49■□□□□ 0.23
PHGDH-231ENST00000641939 HAUS6Q7Z4H7 955 aa16.49■□□□□ 0.23
PHGDH-231ENST00000641939 KCNN1Q92952 543 aa16.49■□□□□ 0.23
PHGDH-231ENST00000641939 TCHPQ9BT92 498 aa16.49■□□□□ 0.23
PHGDH-231ENST00000641939 CCDC94Q9BW85 323 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-231ENST00000641939 BARX2Q9UMQ3 279 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-231ENST00000641939 ABLIM1O14639 778 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 MBTPS2O43462 519 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 TOM1L1O75674 476 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 SOD2P04179 222 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 MCF2P10911 925 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 SCP2P22307 547 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 GRM5P41594 1212 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 TUSC3Q13454 348 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 PKP1Q13835 747 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 LLGL2Q6P1M3 1020 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 ZPBP2Q6X784 338 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 TMEM184AQ6ZMB5 413 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 CCDC73Q6ZRK6 1079 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 SV2BQ7L1I2 683 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 ZBTB33Q86T24 672 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 FAM178BQ8IXR5 827 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 TMEM87AQ8NBN3 555 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 SMRP1Q8NCR6 262 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 CXCL16Q9H2A7 254 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 ZHX3Q9H4I2 956 aa16.48■□□□□ 0.23
PHGDH-231ENST00000641939 TCHHQ07283 1943 aa16.47■□□□□ 0.23
PHGDH-231ENST00000641939 F8W810 466 aa16.47■□□□□ 0.23
PHGDH-231ENST00000641939 K7ENM7 598 aa16.47■□□□□ 0.23
PHGDH-231ENST00000641939 TRAK2O60296 914 aa16.47■□□□□ 0.23
PHGDH-231ENST00000641939 CLASP2O75122 1294 aaKnown RBP16.47■□□□□ 0.23
PHGDH-231ENST00000641939 BRD1O95696 1058 aa16.47■□□□□ 0.23
PHGDH-231ENST00000641939 EFEMP2O95967 443 aa16.47■□□□□ 0.23
PHGDH-231ENST00000641939 STAT6P42226 847 aa16.47■□□□□ 0.23
PHGDH-231ENST00000641939 YARSP54577 528 aaKnown RBP16.47■□□□□ 0.23
PHGDH-231ENST00000641939 PTPN14Q15678 1187 aa16.47■□□□□ 0.23
PHGDH-231ENST00000641939 NAB2Q15742 525 aa16.47■□□□□ 0.23
PHGDH-231ENST00000641939 SMAD2Q15796 467 aaKnown RBP16.47■□□□□ 0.23
PHGDH-231ENST00000641939 FOXD4L6Q3SYB3 417 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-231ENST00000641939 ATL3Q6DD88 541 aa16.47■□□□□ 0.23
PHGDH-231ENST00000641939 FOXD4L3Q6VB84 417 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-231ENST00000641939 CEP120Q8N960 986 aa16.47■□□□□ 0.23
PHGDH-231ENST00000641939 ZBTB45Q96K62 511 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-231ENST00000641939 HERC2P3Q9BVR0 1158 aa16.47■□□□□ 0.23
PHGDH-231ENST00000641939 TOPORSQ9NS56 1045 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-231ENST00000641939 ANKFY1Q9P2R3 1169 aa16.47■□□□□ 0.23
PHGDH-231ENST00000641939 CASTOR2A6NHX0 329 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 URODP06132 367 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 HARSP12081 509 aaKnown RBP16.46■□□□□ 0.23
PHGDH-231ENST00000641939 ABCD1P33897 745 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 OSTNP61366 133 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 HSP90AA2PQ14568 343 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-231ENST00000641939 NOLC1Q14978 699 aaKnown RBP eCLIP16.46■□□□□ 0.23
PHGDH-231ENST00000641939 FUT10Q6P4F1 479 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 DYMQ7RTS9 669 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 RNF168Q8IYW5 571 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-231ENST00000641939 KCNG4Q8TDN1 519 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 RABGGTAQ92696 567 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 DDX12PQ92771 950 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 CASP10Q92851 521 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 BICD1Q96G01 975 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 ACAP3Q96P50 834 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 PANK2Q9BZ23 570 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 MRPL17Q9NRX2 175 aaKnown RBP16.46■□□□□ 0.23
PHGDH-231ENST00000641939 PRKAG3Q9UGI9 489 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 ADAM28Q9UKQ2 775 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 TBX20Q9UMR3 447 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 SSX2IPQ9Y2D8 614 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 HCFC2Q9Y5Z7 792 aa16.46■□□□□ 0.23
PHGDH-231ENST00000641939 MTCL1Q9Y4B5 1905 aaKnown RBP16.46■□□□□ 0.23
PHGDH-231ENST00000641939 A0A087X0B3 334 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms