RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 STK4Q13043 487 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 CLLU1OSQ5K130 101 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 ODR4Q5SWX8 454 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 CDKAL1Q5VV42 579 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 PDE12Q6L8Q7 609 aaKnown RBP13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 ANKRD54Q6NXT1 300 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 CCDC186Q7Z3E2 898 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 TPH2Q8IWU9 490 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 LRRC71Q8N4P6 559 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 ANKRD20A12PQ8NF67 263 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 NOC3LQ8WTT2 800 aaKnown RBP13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 PBXIP1Q96AQ6 731 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 NACC1Q96RE7 527 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 TMEM117Q9H0C3 514 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 SLC39A2Q9NP94 309 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 RNF216Q9NWF9 866 aaPredicted RBP13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 RGL1Q9NZL6 768 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 GABBR1Q9UBS5 961 aa13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.05□□□□□ -0.32
ERGIC3-220ENST00000640748 P4HBP07237 508 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 PSAPP07602 524 aa13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 EIF4BP23588 611 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 GSDMDP57764 484 aa13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 NLRP11P59045 1033 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 TCF15Q12870 199 aa13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 UGCGQ16739 394 aa13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 FILIP1LQ4L180 1135 aa13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 HSP90AA4PQ58FG1 418 aa13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 PLPP4Q5VZY2 271 aa13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 EFCAB12Q6NXP0 572 aa13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 KCNT2Q6UVM3 1135 aa13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 TMC6Q7Z403 805 aa13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 ZNF598Q86UK7 904 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 ECHDC2Q86YB7 292 aa13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 GUF1Q8N442 669 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 KIAA0895Q8NCT3 520 aa13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 ZNF668Q96K58 619 aaPredicted RBP13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 TCF25Q9BQ70 676 aa13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 CDH22Q9UJ99 828 aa13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 CACNA1HO95180 2353 aa13.04□□□□□ -0.32
ERGIC3-220ENST00000640748 USP34Q70CQ2 3546 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 FRMD3A2A2Y4 597 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 MAGEB2O15479 319 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 KIF20AO95235 890 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 SFNP31947 248 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 GPC3P51654 580 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 JAK3P52333 1124 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 SIGLEC14Q08ET2 396 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 DRP2Q13474 957 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 GIT2Q14161 759 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 ARSHQ5FYA8 562 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 FAM26FQ5R3K3 315 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 LRRC43Q8N309 656 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 FBXL6Q8N531 539 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 RDM1Q8NG50 284 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 NAP1L5Q96NT1 182 aaPredicted RBP13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 CEP89Q96ST8 783 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 APOL5Q9BWW9 433 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 BHMT2Q9H2M3 363 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 THAP9Q9H5L6 903 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 LIMA1Q9UHB6 759 aaKnown RBP13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 AKT3Q9Y243 479 aa13.03□□□□□ -0.32
ERGIC3-220ENST00000640748 KMT2EQ8IZD2 1858 aa13.02□□□□□ -0.32
ERGIC3-220ENST00000640748 MYH9P35579 1960 aaKnown RBP13.02□□□□□ -0.32
ERGIC3-220ENST00000640748 NPHP3-ACAD11A0A0J9YXS1 232 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 A0A0U1RQF3 1178 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 TRIM49BA6NDI0 452 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 WDR64B1ANS9 1081 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 KCNJ18B7U540 433 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 STBD1O95210 358 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 FGFR1OPO95684 399 aaKnown RBP13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 OATP04181 439 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 DARSP14868 501 aaKnown RBP13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 FGFR4P22455 802 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 VCPP55072 806 aaKnown RBP13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 PRKCEQ02156 737 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 KCNJ12Q14500 433 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 TARBP2Q15633 366 aaKnown RBP13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 PTPN21Q16825 1174 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 CENPPQ6IPU0 288 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 TTI2Q6NXR4 508 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 LLGL2Q6P1M3 1020 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 FILIP1Q7Z7B0 1213 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 FAM114A1Q8IWE2 563 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 SLC39A11Q8N1S5 342 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 HPS3Q969F9 1004 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 FAM167AQ96KS9 214 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 ZNF830Q96NB3 372 aaPredicted RBP13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 ZNF558Q96NG5 402 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 MAP7D2Q96T17 732 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 TSG101Q99816 390 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 LXNQ9BS40 222 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 ZSWIM4Q9H7M6 989 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 NGRNQ9NPE2 291 aaKnown RBP13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 ENTPD7Q9NQZ7 604 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 SPG21Q9NZD8 308 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 KCND2Q9NZV8 630 aa13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 MAGEC2Q9UBF1 373 aaPredicted RBP13.02□□□□□ -0.33
ERGIC3-220ENST00000640748 SAMM50Q9Y512 469 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms