RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 SREBF1P36956 1147 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 ALDH7A1P49419 539 aaKnown RBP11.71□□□□□ -0.54
SCN1B-208ENST00000640135 PSMD6Q15008 389 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 NBPF9Q3BBW0 867 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 SPOPLQ6IQ16 392 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 GDAP1L1Q96MZ0 367 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 SPON2Q9BUD6 331 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 SPATC1LQ9H0A9 340 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 UVRAGQ9P2Y5 699 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 NRBP1Q9UHY1 535 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 PSMD3O43242 534 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 DSG3P32926 999 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 NR1H3Q13133 447 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 ADSSL1Q8N142 457 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 MMTAG2Q9BU76 263 aaKnown RBP11.71□□□□□ -0.54
SCN1B-208ENST00000640135 GOLPH3LQ9H4A5 285 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 APEX2Q9UBZ4 518 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 ATP8A1Q9Y2Q0 1164 aa11.71□□□□□ -0.54
SCN1B-208ENST00000640135 RTN2O75298 545 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 SUN1O94901 812 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 ZNF235Q14590 738 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 DBN1Q16643 649 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 ARHGAP15Q53QZ3 475 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 IRAK4Q9NWZ3 460 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 CREB3O43889 395 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 HERVK_113P62684 666 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 EMBQ6PCB8 327 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 UHMK1Q8TAS1 419 aaKnown RBP11.7□□□□□ -0.54
SCN1B-208ENST00000640135 SLITRK1Q96PX8 696 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 TMEM8AQ9HCN3 771 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 MAGED2Q9UNF1 606 aaPredicted RBP11.7□□□□□ -0.54
SCN1B-208ENST00000640135 TAF6P49848 677 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 NLRP11P59045 1033 aaKnown RBP11.7□□□□□ -0.54
SCN1B-208ENST00000640135 PHLDB3Q6NSJ2 640 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 CLEC17AQ6ZS10 378 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 ZNF677Q86XU0 584 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 RSRC1Q96IZ7 334 aaKnown RBP11.7□□□□□ -0.54
SCN1B-208ENST00000640135 AGPAT1Q99943 283 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 FBXO28Q9NVF7 368 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 CCDC151A5D8V7 595 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 CASP1P29466 404 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 ALDH1A3P47895 512 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 FKBP1BP68106 108 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 ELAVL2Q12926 359 aaKnown RBP11.7□□□□□ -0.54
SCN1B-208ENST00000640135 C6orf118Q5T5N4 469 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 ALS2CLQ60I27 953 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 PCNX4Q63HM2 1172 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 ASAP3Q8TDY4 903 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 SDCCAG3Q96C92 435 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 FAM96AQ9H5X1 160 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 DHX35Q9H5Z1 703 aaKnown RBP11.7□□□□□ -0.54
SCN1B-208ENST00000640135 RRAGCQ9HB90 399 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 VCX3AQ9NNX9 186 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 VTA1Q9NP79 307 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 LIMA1Q9UHB6 759 aaKnown RBP11.7□□□□□ -0.54
SCN1B-208ENST00000640135 FNDC3AQ9Y2H6 1198 aaKnown RBP11.7□□□□□ -0.54
SCN1B-208ENST00000640135 HEY1Q9Y5J3 304 aa11.7□□□□□ -0.54
SCN1B-208ENST00000640135 WNT10BO00744 389 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 RASGRF2O14827 1237 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 CHRNA3P32297 505 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 FMO5P49326 533 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 ADCY2Q08462 1091 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 DACT2Q5SW24 774 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 PDXDC1Q6P996 788 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 TRAPPC11Q7Z392 1133 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 LMNTD2Q8IXW0 634 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 SYT2Q8N9I0 419 aaPredicted RBP11.69□□□□□ -0.54
SCN1B-208ENST00000640135 TUBB6Q9BUF5 446 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 POLD4Q9HCU8 107 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 UPP2O95045 317 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 PRR29P0C7W0 189 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 CYP2C8P10632 490 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 NAMPTP43490 491 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 GNGT1P63211 74 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 ANO4Q32M45 955 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 ACCSLQ4AC99 568 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 ANKRD40Q6AI12 368 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 METTL7BQ6UX53 244 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 CAPS2Q9BXY5 557 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 PLEKHA5Q9HAU0 1116 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 KIF1AQ12756 1690 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 GRID2IPA4D2P6 1211 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 PALMO75781 387 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 TTC4O95801 387 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 MOCS2O96007 188 aaPredicted RBP11.69□□□□□ -0.54
SCN1B-208ENST00000640135 THPOP40225 353 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 OR1G1P47890 313 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 CCT5P48643 541 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 ACOT2P49753 483 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 SATB1Q01826 763 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 SFSWAPQ12872 951 aaKnown RBP11.69□□□□□ -0.54
SCN1B-208ENST00000640135 KLHL38Q2WGJ6 581 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 ATG16L1Q676U5 607 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 NIF3L1Q9GZT8 377 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 STARD7Q9NQZ5 370 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 KIAA1257Q9ULG3 409 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 PCDHB2Q9Y5E7 798 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 PDHXO00330 501 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 CLGNO14967 610 aa11.69□□□□□ -0.54
SCN1B-208ENST00000640135 NME3Q13232 169 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms