RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 POTEGQ6S5H5 508 aa16.66■□□□□ 0.26
SYNE2-228ENST00000639659 PARM1Q6UWI2 310 aa16.66■□□□□ 0.26
SYNE2-228ENST00000639659 C1orf210Q8IVY1 113 aa16.66■□□□□ 0.26
SYNE2-228ENST00000639659 PJA1Q8NG27 643 aa16.66■□□□□ 0.26
SYNE2-228ENST00000639659 FGF14Q92915 247 aa16.66■□□□□ 0.26
SYNE2-228ENST00000639659 ZNF274Q96GC6 653 aaPredicted RBP16.66■□□□□ 0.26
SYNE2-228ENST00000639659 NAP1L4Q99733 375 aaKnown RBP16.66■□□□□ 0.26
SYNE2-228ENST00000639659 EIF2AK1Q9BQI3 630 aaKnown RBP16.66■□□□□ 0.26
SYNE2-228ENST00000639659 PAAF1Q9BRP4 392 aa16.66■□□□□ 0.26
SYNE2-228ENST00000639659 RPP25Q9BUL9 199 aaKnown RBP16.66■□□□□ 0.26
SYNE2-228ENST00000639659 RHOBTB2Q9BYZ6 727 aa16.66■□□□□ 0.26
SYNE2-228ENST00000639659 POLR3FQ9H1D9 316 aaPredicted RBP16.66■□□□□ 0.26
SYNE2-228ENST00000639659 ZSWIM6Q9HCJ5 1215 aa16.66■□□□□ 0.26
SYNE2-228ENST00000639659 SPATA6Q9NWH7 488 aaPredicted RBP16.66■□□□□ 0.26
SYNE2-228ENST00000639659 MIA3Q5JRA6 1907 aa16.66■□□□□ 0.26
SYNE2-228ENST00000639659 SF3B1O75533 1304 aaKnown RBP eCLIP16.66■□□□□ 0.26
SYNE2-228ENST00000639659 DOCK6Q96HP0 2047 aa16.65■□□□□ 0.26
SYNE2-228ENST00000639659 ANHXE9PGG2 379 aa16.65■□□□□ 0.26
SYNE2-228ENST00000639659 TBX3O15119 743 aa16.65■□□□□ 0.26
SYNE2-228ENST00000639659 CDKL5O76039 1030 aa16.65■□□□□ 0.26
SYNE2-228ENST00000639659 EFEMP2O95967 443 aa16.65■□□□□ 0.26
SYNE2-228ENST00000639659 LIG1P18858 919 aa16.65■□□□□ 0.26
SYNE2-228ENST00000639659 FOSBP53539 338 aa16.65■□□□□ 0.26
SYNE2-228ENST00000639659 GPC5P78333 572 aa16.65■□□□□ 0.26
SYNE2-228ENST00000639659 PCBP1Q15365 356 aaKnown RBP eCLIP16.65■□□□□ 0.26
SYNE2-228ENST00000639659 PSMD5Q16401 504 aa16.65■□□□□ 0.26
SYNE2-228ENST00000639659 AMHR2Q16671 573 aa16.65■□□□□ 0.26
SYNE2-228ENST00000639659 PPM1LQ5SGD2 360 aa16.65■□□□□ 0.26
SYNE2-228ENST00000639659 FAM171A1Q5VUB5 890 aa16.65■□□□□ 0.26
SYNE2-228ENST00000639659 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
SYNE2-228ENST00000639659 PDRG1Q9NUG6 133 aa16.65■□□□□ 0.26
SYNE2-228ENST00000639659 FNIP2Q9P278 1114 aa16.65■□□□□ 0.26
SYNE2-228ENST00000639659 ZNF292O60281 2723 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 DGAT1O75907 488 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 SLITRK3O94933 977 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 KIF4AO95239 1232 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 C8AP07357 584 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 GLULP15104 373 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 GLRA2P23416 452 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 SCRN1Q12765 414 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 EARS2Q5JPH6 523 aaKnown RBP16.64■□□□□ 0.25
SYNE2-228ENST00000639659 LILRA6Q6PI73 481 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 FAM177A1Q8N128 213 aaPredicted RBP16.64■□□□□ 0.25
SYNE2-228ENST00000639659 GSTCDQ8NEC7 633 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 PIGOQ8TEQ8 1089 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 RUBCNQ92622 972 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 SHDQ96IW2 340 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 KXD1Q9BQD3 176 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 SLC2A4RGQ9NR83 387 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 DLGAP2Q9P1A6 1054 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 FBXW11Q9UKB1 542 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 CDH7Q9ULB5 785 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 FRYLO94915 3013 aa16.64■□□□□ 0.25
SYNE2-228ENST00000639659 KINO60870 393 aaKnown RBP16.63■□□□□ 0.25
SYNE2-228ENST00000639659 SPIRE1Q08AE8 756 aa16.63■□□□□ 0.25
SYNE2-228ENST00000639659 NR5A1Q13285 461 aa16.63■□□□□ 0.25
SYNE2-228ENST00000639659 TUSC3Q13454 348 aa16.63■□□□□ 0.25
SYNE2-228ENST00000639659 CALCRLQ16602 461 aa16.63■□□□□ 0.25
SYNE2-228ENST00000639659 SLC7A14Q8TBB6 771 aa16.63■□□□□ 0.25
SYNE2-228ENST00000639659 ING5Q8WYH8 240 aa16.63■□□□□ 0.25
SYNE2-228ENST00000639659 TTPALQ9BTX7 342 aa16.63■□□□□ 0.25
SYNE2-228ENST00000639659 BCO2Q9BYV7 579 aa16.63■□□□□ 0.25
SYNE2-228ENST00000639659 GPRC5CQ9NQ84 441 aa16.63■□□□□ 0.25
SYNE2-228ENST00000639659 NCDNQ9UBB6 729 aa16.63■□□□□ 0.25
SYNE2-228ENST00000639659 LAMTOR5O43504 91 aa16.62■□□□□ 0.25
SYNE2-228ENST00000639659 XYLBO75191 536 aa16.62■□□□□ 0.25
SYNE2-228ENST00000639659 CD72P21854 359 aa16.62■□□□□ 0.25
SYNE2-228ENST00000639659 KRT2P35908 639 aa16.62■□□□□ 0.25
SYNE2-228ENST00000639659 ARL2P36404 184 aa16.62■□□□□ 0.25
SYNE2-228ENST00000639659 MLF2Q15773 248 aaPredicted RBP16.62■□□□□ 0.25
SYNE2-228ENST00000639659 MTSS1LQ765P7 747 aa16.62■□□□□ 0.25
SYNE2-228ENST00000639659 IFNLR1Q8IU57 520 aaPredicted RBP16.62■□□□□ 0.25
SYNE2-228ENST00000639659 ZBTB8OSQ8IWT0 167 aa16.62■□□□□ 0.25
SYNE2-228ENST00000639659 ITFG1Q8TB96 612 aa16.62■□□□□ 0.25
SYNE2-228ENST00000639659 FGF13Q92913 245 aa16.62■□□□□ 0.25
SYNE2-228ENST00000639659 BRMS1Q9HCU9 246 aa16.62■□□□□ 0.25
SYNE2-228ENST00000639659 ANKEF1Q9NU02 776 aa16.62■□□□□ 0.25
SYNE2-228ENST00000639659 SNTG2Q9NY99 539 aa16.62■□□□□ 0.25
SYNE2-228ENST00000639659 PCDHA12Q9UN75 941 aa16.62■□□□□ 0.25
SYNE2-228ENST00000639659 KANSL1LA0AUZ9 987 aa16.61■□□□□ 0.25
SYNE2-228ENST00000639659 ADAM12O43184 909 aa16.61■□□□□ 0.25
SYNE2-228ENST00000639659 TXKP42681 527 aa16.61■□□□□ 0.25
SYNE2-228ENST00000639659 RARRES1P49788 294 aa16.61■□□□□ 0.25
SYNE2-228ENST00000639659 CSTF1Q05048 431 aaKnown RBP16.61■□□□□ 0.25
SYNE2-228ENST00000639659 PUM1Q14671 1186 aaKnown RBP eCLIP16.61■□□□□ 0.25
SYNE2-228ENST00000639659 CLSTN3Q9BQT9 956 aa16.61■□□□□ 0.25
SYNE2-228ENST00000639659 TTC12Q9H892 705 aaPredicted RBP16.61■□□□□ 0.25
SYNE2-228ENST00000639659 HCFC1R1Q9NWW0 138 aa16.61■□□□□ 0.25
SYNE2-228ENST00000639659 ORC3Q9UBD5 711 aaPredicted RBP16.61■□□□□ 0.25
SYNE2-228ENST00000639659 USP20Q9Y2K6 914 aa16.61■□□□□ 0.25
SYNE2-228ENST00000639659 MTF2Q9Y483 593 aaPredicted RBP16.61■□□□□ 0.25
SYNE2-228ENST00000639659 ZFP37Q9Y6Q3 630 aaPredicted RBP16.61■□□□□ 0.25
SYNE2-228ENST00000639659 STK36Q9NRP7 1315 aa16.61■□□□□ 0.25
SYNE2-228ENST00000639659 CACNA1IQ9P0X4 2223 aa16.61■□□□□ 0.25
SYNE2-228ENST00000639659 FANCMQ8IYD8 2048 aa16.6■□□□□ 0.25
SYNE2-228ENST00000639659 A0A1B0GUA9 196 aa16.6■□□□□ 0.25
SYNE2-228ENST00000639659 FAM170BA6NMN3 283 aa16.6■□□□□ 0.25
SYNE2-228ENST00000639659 RECQL4O94761 1208 aa16.6■□□□□ 0.25
SYNE2-228ENST00000639659 THP07101 528 aa16.6■□□□□ 0.25
SYNE2-228ENST00000639659 HNRNPA1P09651 372 aaKnown RBP eCLIP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms