RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ZPBP2Q6X784 338 aa23.87■■□□□ 1.41
SCN1B-206ENST00000638536 COLGALT2Q8IYK4 626 aa23.87■■□□□ 1.41
SCN1B-206ENST00000638536 HACE1Q8IYU2 909 aa23.87■■□□□ 1.41
SCN1B-206ENST00000638536 SPG21Q9NZD8 308 aa23.87■■□□□ 1.41
SCN1B-206ENST00000638536 KANSL3Q9P2N6 904 aa23.87■■□□□ 1.41
SCN1B-206ENST00000638536 H0YCG3 227 aa23.86■■□□□ 1.41
SCN1B-206ENST00000638536 MYBP10242 640 aa23.86■■□□□ 1.41
SCN1B-206ENST00000638536 DSC1Q08554 894 aa23.86■■□□□ 1.41
SCN1B-206ENST00000638536 TCEAL5Q5H9L2 206 aa23.86■■□□□ 1.41
SCN1B-206ENST00000638536 ADGRD2Q7Z7M1 963 aa23.86■■□□□ 1.41
SCN1B-206ENST00000638536 RSPH1Q8WYR4 309 aa23.86■■□□□ 1.41
SCN1B-206ENST00000638536 RABGGTAQ92696 567 aa23.86■■□□□ 1.41
SCN1B-206ENST00000638536 LMAN2LQ9H0V9 348 aa23.86■■□□□ 1.41
SCN1B-206ENST00000638536 ST6GALNAC4Q9H4F1 302 aa23.86■■□□□ 1.41
SCN1B-206ENST00000638536 MRPL44Q9H9J2 332 aaKnown RBP23.86■■□□□ 1.41
SCN1B-206ENST00000638536 FAM237AA0A1B0GTK4 181 aa23.85■■□□□ 1.41
SCN1B-206ENST00000638536 ANKRD63C9JTQ0 380 aa23.85■■□□□ 1.41
SCN1B-206ENST00000638536 MCF2P10911 925 aa23.85■■□□□ 1.41
SCN1B-206ENST00000638536 GAP43P17677 238 aa23.85■■□□□ 1.41
SCN1B-206ENST00000638536 ANP32AP39687 249 aaKnown RBP23.85■■□□□ 1.41
SCN1B-206ENST00000638536 GRM5P41594 1212 aa23.85■■□□□ 1.41
SCN1B-206ENST00000638536 COASYQ13057 564 aa23.85■■□□□ 1.41
SCN1B-206ENST00000638536 CUL4BQ13620 913 aa23.85■■□□□ 1.41
SCN1B-206ENST00000638536 MAP4K3Q8IVH8 894 aa23.85■■□□□ 1.41
SCN1B-206ENST00000638536 MRPS27Q92552 414 aaKnown RBP23.85■■□□□ 1.41
SCN1B-206ENST00000638536 BICD1Q96G01 975 aa23.85■■□□□ 1.41
SCN1B-206ENST00000638536 C7orf25Q9BPX7 421 aa23.85■■□□□ 1.41
SCN1B-206ENST00000638536 PAAF1Q9BRP4 392 aa23.85■■□□□ 1.41
SCN1B-206ENST00000638536 VN1R3Q9BXE9 311 aa23.85■■□□□ 1.41
SCN1B-206ENST00000638536 SEL1LQ9UBV2 794 aa23.85■■□□□ 1.41
SCN1B-206ENST00000638536 NRP1O14786 923 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 PIGRP01833 764 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 GTF2F1P35269 517 aaKnown RBP eCLIP23.84■■□□□ 1.41
SCN1B-206ENST00000638536 MCL1Q07820 350 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 NAB2Q15742 525 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 CSPP1Q1MSJ5 1256 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 GLRA4Q5JXX5 417 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 IGSF21Q96ID5 467 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 FAM193BQ96PV7 902 aaPredicted RBP23.84■■□□□ 1.41
SCN1B-206ENST00000638536 OLFML3Q9NRN5 406 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 PDCD11Q14690 1871 aaKnown RBP23.84■■□□□ 1.41
SCN1B-206ENST00000638536 HNRNPDLO14979 420 aaKnown RBP23.84■■□□□ 1.41
SCN1B-206ENST00000638536 CLDN3O15551 220 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 SLFN14P0C7P3 912 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 PPM1AP35813 382 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 LIG4P49917 911 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 ASIC1P78348 528 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 NOLC1Q14978 699 aaKnown RBP eCLIP23.84■■□□□ 1.41
SCN1B-206ENST00000638536 SKIV2LQ15477 1246 aaKnown RBP23.84■■□□□ 1.41
SCN1B-206ENST00000638536 ZBTB41Q5SVQ8 909 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 FSIP1Q8NA03 581 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 RPS6KC1Q96S38 1066 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 TLR9Q9NR96 1032 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 MARCH5Q9NX47 278 aa23.84■■□□□ 1.41
SCN1B-206ENST00000638536 PRG3Q9Y2Y8 225 aaPredicted RBP23.84■■□□□ 1.41
SCN1B-206ENST00000638536 A0A1W2PQ27 194 aa23.83■■□□□ 1.41
SCN1B-206ENST00000638536 A0A1W2PQ64 194 aa23.83■■□□□ 1.41
SCN1B-206ENST00000638536 A0A1W2PQD8 194 aa23.83■■□□□ 1.41
SCN1B-206ENST00000638536 ALDH2P05091 517 aa23.83■■□□□ 1.41
SCN1B-206ENST00000638536 TNFSF9P41273 254 aa23.83■■□□□ 1.41
SCN1B-206ENST00000638536 OR1G1P47890 313 aa23.83■■□□□ 1.41
SCN1B-206ENST00000638536 UBE3AQ05086 875 aa23.83■■□□□ 1.41
SCN1B-206ENST00000638536 CNNM4Q6P4Q7 775 aa23.83■■□□□ 1.41
SCN1B-206ENST00000638536 ALKAL1Q6UXT8 129 aa23.83■■□□□ 1.41
SCN1B-206ENST00000638536 CCDC65Q8IXS2 484 aa23.83■■□□□ 1.41
SCN1B-206ENST00000638536 PAGE5Q96GU1 130 aa23.83■■□□□ 1.41
SCN1B-206ENST00000638536 TMEM175Q9BSA9 504 aa23.83■■□□□ 1.41
SCN1B-206ENST00000638536 NSUN3Q9H649 340 aaKnown RBP23.83■■□□□ 1.41
SCN1B-206ENST00000638536 FAN1Q9Y2M0 1017 aa23.83■■□□□ 1.41
SCN1B-206ENST00000638536 FSCN2O14926 492 aa23.82■■□□□ 1.4
SCN1B-206ENST00000638536 FAM189A1O60320 539 aa23.82■■□□□ 1.4
SCN1B-206ENST00000638536 GCNT3O95395 438 aa23.82■■□□□ 1.4
SCN1B-206ENST00000638536 IGFBP6P24592 240 aaPredicted RBP23.82■■□□□ 1.4
SCN1B-206ENST00000638536 MATR3P43243 847 aaKnown RBP eCLIP23.82■■□□□ 1.4
SCN1B-206ENST00000638536 SYKP43405 635 aa23.82■■□□□ 1.4
SCN1B-206ENST00000638536 AMPD3Q01432 767 aa23.82■■□□□ 1.4
SCN1B-206ENST00000638536 GRIK3Q13003 919 aa23.82■■□□□ 1.4
SCN1B-206ENST00000638536 ZMAT2Q96NC0 199 aaKnown RBP23.82■■□□□ 1.4
SCN1B-206ENST00000638536 LRRC27Q9C0I9 530 aa23.82■■□□□ 1.4
SCN1B-206ENST00000638536 MAGEF1Q9HAY2 307 aa23.82■■□□□ 1.4
SCN1B-206ENST00000638536 CIZ1Q9ULV3 898 aaPredicted RBP23.82■■□□□ 1.4
SCN1B-206ENST00000638536 LZTS1Q9Y250 596 aa23.82■■□□□ 1.4
SCN1B-206ENST00000638536 ZMYM2Q9UBW7 1377 aa23.82■■□□□ 1.4
SCN1B-206ENST00000638536 ANK1P16157 1881 aa23.82■■□□□ 1.4
SCN1B-206ENST00000638536 PRPF6O94906 941 aaKnown RBP23.81■■□□□ 1.4
SCN1B-206ENST00000638536 KRT17Q04695 432 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 TIGD5Q53EQ6 642 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 CEP57L1Q8IYX8 460 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 TMEM130Q8N3G9 435 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 MICAL1Q8TDZ2 1067 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 TMEM169Q96HH4 297 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 CCDC94Q9BW85 323 aaPredicted RBP23.81■■□□□ 1.4
SCN1B-206ENST00000638536 HIDE1A8MVS5 230 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 SCP2P22307 547 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 TFF2Q03403 129 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 EHHADHQ08426 723 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 HYAL1Q12794 435 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 SLC10A6Q3KNW5 377 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 XKR4Q5GH76 650 aa23.81■■□□□ 1.4
SCN1B-206ENST00000638536 PLPP4Q5VZY2 271 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms