RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 IKZF4Q9H2S9 585 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 MLXIPLQ9NP71 852 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 GTF3C4Q9UKN8 822 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 TRIM33Q9UPN9 1127 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 SPATA31A5Q5VU36 1347 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 SPATA31A6Q5VVP1 1343 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 SPATA31A7Q8IWB4 1347 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 UBAP1LF5GYI3 381 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 GH1P01241 217 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 TAC1P20366 129 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 CALB2P22676 271 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 RASSF2P50749 326 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 POLGP54098 1239 aaPredicted RBP15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 YARSP54577 528 aaKnown RBP15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 MGAT5Q09328 741 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 NR1H3Q13133 447 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 KYNUQ16719 465 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 CGB2Q6NT52 195 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 VSIG1Q86XK7 387 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 PIGOQ8TEQ8 1089 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 SH3GL3Q99963 347 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 ZFATQ9P243 1243 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 SUGT1Q9Y2Z0 365 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 USH1CQ9Y6N9 552 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 EML1O00423 815 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 SORBS3O60504 671 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 ATF2P15336 505 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 ALDH3A1P30838 453 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 MKL1Q969V6 931 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 P2RX7Q99572 595 aaKnown RBP15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 CTNNAL1Q9UBT7 734 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 ANAPC5Q9UJX4 755 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 RPL26L1Q9UNX3 145 aaKnown RBP15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 COL16A1Q07092 1604 aaPredicted RBP15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 MAPK13O15264 365 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 MAGEB2O15479 319 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 DCTN3O75935 186 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 GNAZP19086 355 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 CHKAP35790 457 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 ODR4Q5SWX8 454 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 SLFN13Q68D06 897 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 FBXO11Q86XK2 927 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 RELL1Q8IUW5 271 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 TPH2Q8IWU9 490 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 LMNTD2Q8IXW0 634 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 EPS8L1Q8TE68 723 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 SH3TC2Q8TF17 1288 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 KIF9Q9HAQ2 790 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 NINJ2Q9NZG7 142 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 NAALADL1Q9UQQ1 740 aa15.82■□□□□ 0.12
CACNA1A-220ENST00000635988 EMSYQ7Z589 1322 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 FAM47DPA6NHR8 397 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 CLDN3O15551 220 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 SLITRK3O94933 977 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 DLATP10515 647 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 IVDP26440 423 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 POLD1P28340 1107 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 ITGA8P53708 1063 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 HSPA2P54652 639 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 SPDYAQ5MJ70 313 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 ZNF746Q6NUN9 644 aaPredicted RBP15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 SRRM1Q8IYB3 904 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 STK32AQ8WU08 396 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 PSPC1Q8WXF1 523 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 LRRC37BQ96QE4 947 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 NACC1Q96RE7 527 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 PCDHB18PQ96TA0 734 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 OSBPL1AQ9BXW6 950 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 UBN1Q9NPG3 1134 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 KCNG1Q9UIX4 513 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 NOCTQ9UK39 431 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 USP20Q9Y2K6 914 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 VAMP7P51809 220 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 MRPS35P82673 323 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 SARNPP82979 210 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 EPC2Q52LR7 807 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 SMIM5Q71RC9 77 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 ARHGEF19Q8IW93 802 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 FAM71AQ8IYT1 594 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 TMEM174Q8WUU8 243 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 C1orf54Q8WWF1 131 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 ZNF653Q96CK0 615 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 POP1Q99575 1024 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 FOXP3Q9BZS1 431 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 CYP39A1Q9NYL5 469 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 NYAP2Q9P242 653 aa15.81■□□□□ 0.12
CACNA1A-220ENST00000635988 FAM170AA1A519 330 aa15.8■□□□□ 0.12
CACNA1A-220ENST00000635988 GNPATO15228 680 aa15.8■□□□□ 0.12
CACNA1A-220ENST00000635988 CHRNB2P17787 502 aa15.8■□□□□ 0.12
CACNA1A-220ENST00000635988 SLC18A1P54219 525 aa15.8■□□□□ 0.12
CACNA1A-220ENST00000635988 WASHC2DQ5SRD0 308 aa15.8■□□□□ 0.12
CACNA1A-220ENST00000635988 RGS9BPQ6ZS82 235 aa15.8■□□□□ 0.12
CACNA1A-220ENST00000635988 OTOP1Q7RTM1 612 aa15.8■□□□□ 0.12
CACNA1A-220ENST00000635988 KSR1Q8IVT5 923 aa15.8■□□□□ 0.12
CACNA1A-220ENST00000635988 ATL2Q8NHH9 583 aa15.8■□□□□ 0.12
CACNA1A-220ENST00000635988 CFAP61Q8NHU2 1237 aa15.8■□□□□ 0.12
CACNA1A-220ENST00000635988 RPGRQ92834 1020 aaKnown RBP15.8■□□□□ 0.12
CACNA1A-220ENST00000635988 UTP4Q969X6 686 aaKnown RBP15.8■□□□□ 0.12
CACNA1A-220ENST00000635988 CRAMP1Q96RY5 1269 aa15.8■□□□□ 0.12
CACNA1A-220ENST00000635988 MYLK2Q9H1R3 596 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms