RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 TBC1D19Q8N5T2 526 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 PRCCQ92733 491 aaPredicted RBP10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 KIF17Q9P2E2 1029 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 PCDHA4Q9UN74 947 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 IRF6O14896 467 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 LRRN2O75325 713 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 NPM3O75607 178 aaKnown RBP10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 CDC25AP30304 524 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 PEX5P50542 639 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 FLOT2Q14254 428 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 SCG3Q8WXD2 468 aaKnown RBP10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 ULK4Q96C45 1275 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 VPS39Q96JC1 886 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 DNAJC7Q99615 494 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 GALNT8Q9NY28 637 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 AIPL1Q9NZN9 384 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 ARHGEF5Q12774 1597 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 USP17L3A6NCW0 530 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 USP17L4A6NCW7 530 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 LCA5LO95447 670 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 CHRNA3P32297 505 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 SLC34A1Q06495 639 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 HIC1Q14526 733 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 B3GNT6Q6ZMB0 384 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 USP17L1Q7RTZ2 530 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 LARP4BQ92615 738 aaKnown RBP10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 KANSL2Q9H9L4 492 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 GDF3Q9NR23 364 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 PCDHB6Q9Y5E3 794 aa10.4□□□□□ -0.74
SPTAN1-228ENST00000635853 RFX7Q2KHR2 1363 aa10.4□□□□□ -0.75
SPTAN1-228ENST00000635853 MAP3K15Q6ZN16 1313 aa10.4□□□□□ -0.75
SPTAN1-228ENST00000635853 SYNGAP1Q96PV0 1343 aa10.4□□□□□ -0.75
SPTAN1-228ENST00000635853 FOXN1O15353 648 aa10.4□□□□□ -0.75
SPTAN1-228ENST00000635853 CPB1P15086 417 aa10.4□□□□□ -0.75
SPTAN1-228ENST00000635853 EIF2B2P49770 351 aaKnown RBP10.4□□□□□ -0.75
SPTAN1-228ENST00000635853 FAM160B2Q86V87 743 aa10.4□□□□□ -0.75
SPTAN1-228ENST00000635853 ZC3H15Q8WU90 426 aaKnown RBP10.4□□□□□ -0.75
SPTAN1-228ENST00000635853 ZNF341Q9BYN7 854 aa10.4□□□□□ -0.75
SPTAN1-228ENST00000635853 RNPEPL1Q9HAU8 725 aa10.4□□□□□ -0.75
SPTAN1-228ENST00000635853 PPARGC1AQ9UBK2 798 aaKnown RBP10.4□□□□□ -0.75
SPTAN1-228ENST00000635853 ATP11BQ9Y2G3 1177 aa10.4□□□□□ -0.75
SPTAN1-228ENST00000635853 EDC4Q6P2E9 1401 aaKnown RBP10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 KIAA0556O60303 1618 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 BICRAQ9NZM4 1560 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 A0A1W2PQJ5 194 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 ARHGEF9O43307 516 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 MYO1DO94832 1006 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 RGS2P41220 211 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 GTF2H3Q13889 308 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 VEPH1Q14D04 833 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 CNGA3Q16281 694 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 NUDCD3Q8IVD9 361 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 USP38Q8NB14 1042 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 USP33Q8TEY7 942 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 NSL1Q96IY1 281 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 CASS4Q9NQ75 786 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 PIM2Q9P1W9 311 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 WDR91A4D1P6 747 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 UBXN8O00124 270 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 MAGEB18Q96M61 343 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 TRPC7Q9HCX4 862 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 ARIH1Q9Y4X5 557 aaPredicted RBP10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 EME2A4GXA9 379 aaPredicted RBP10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 DPPA5A6NC42 116 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 RSPH10B2B2RC85 870 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 HUS1O60921 280 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 ASMTLO95671 621 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 CCDC159P0C7I6 412 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 RSPH10BP0C881 870 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 CAPZA2P47755 286 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 CCDC157Q569K6 752 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 RFX8Q6ZV50 586 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 ZNF496Q96IT1 587 aaPredicted RBP10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 USP42Q9H9J4 1324 aaKnown RBP10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 LAD1O00515 517 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 HNRNPRO43390 633 aaKnown RBP10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 GSTA3Q16772 222 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 CYP4F22Q6NT55 531 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 TAS2R42Q7RTR8 314 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 TMCO5AQ8N6Q1 288 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 ZFAND2BQ8WV99 257 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 EGFL8Q99944 293 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 SH3GL2Q99962 352 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 CCDC28BQ9BUN5 200 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 SMYD3Q9H7B4 428 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 SP110Q9HB58 689 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 SMARCAL1Q9NZC9 954 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 TBX22Q9Y458 520 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 MROH7-TTC4A0A0A0MT08 1334 aa10.39□□□□□ -0.75
SPTAN1-228ENST00000635853 KIF28PB7ZC32 967 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 PSMA2P25787 234 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 HSPA13P48723 471 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 MECOMQ03112 1051 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 KYNUQ16719 465 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 TTLL6Q8N841 843 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 KIFC3Q9BVG8 833 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 HAO1Q9UJM8 370 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 ATP10DQ9P241 1426 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 LOC102724428A0A0B4J2F2 783 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 MAFGO15525 162 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms