RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 SYCE2Q6PIF2 218 aa14.36□□□□□ -0.11
ATRX-208ENST00000622960 KLHL5Q96PQ7 755 aa14.36□□□□□ -0.11
ATRX-208ENST00000622960 S1PR5Q9H228 398 aa14.36□□□□□ -0.11
ATRX-208ENST00000622960 TMEM134Q9H6X4 195 aa14.36□□□□□ -0.11
ATRX-208ENST00000622960 MARCH5Q9NX47 278 aa14.36□□□□□ -0.11
ATRX-208ENST00000622960 LARSQ9P2J5 1176 aaKnown RBP14.36□□□□□ -0.11
ATRX-208ENST00000622960 TNFSF13BQ9Y275 285 aa14.36□□□□□ -0.11
ATRX-208ENST00000622960 CNPP09543 421 aaKnown RBP14.35□□□□□ -0.11
ATRX-208ENST00000622960 PLA2G4BP0C869 781 aa14.35□□□□□ -0.11
ATRX-208ENST00000622960 EPCAMP16422 314 aa14.35□□□□□ -0.11
ATRX-208ENST00000622960 LONP1P36776 959 aaKnown RBP14.35□□□□□ -0.11
ATRX-208ENST00000622960 TXLNAP40222 546 aa14.35□□□□□ -0.11
ATRX-208ENST00000622960 MATR3P43243 847 aaKnown RBP eCLIP14.35□□□□□ -0.11
ATRX-208ENST00000622960 RAD51AP2Q09MP3 1159 aa14.35□□□□□ -0.11
ATRX-208ENST00000622960 IL17AQ16552 155 aa14.35□□□□□ -0.11
ATRX-208ENST00000622960 PDXDC1Q6P996 788 aa14.35□□□□□ -0.11
ATRX-208ENST00000622960 SYT2Q8N9I0 419 aaPredicted RBP14.35□□□□□ -0.11
ATRX-208ENST00000622960 TDRD5Q8NAT2 981 aaKnown RBP14.35□□□□□ -0.11
ATRX-208ENST00000622960 BICD1Q96G01 975 aa14.35□□□□□ -0.11
ATRX-208ENST00000622960 PLIN2Q99541 437 aa14.35□□□□□ -0.11
ATRX-208ENST00000622960 RUSC1Q9BVN2 902 aa14.35□□□□□ -0.11
ATRX-208ENST00000622960 VN1R3Q9BXE9 311 aa14.35□□□□□ -0.11
ATRX-208ENST00000622960 POLD4Q9HCU8 107 aa14.35□□□□□ -0.11
ATRX-208ENST00000622960 CASTOR2A6NHX0 329 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 SLC16A4O15374 487 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 PLS3P13797 630 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 SCP2P22307 547 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 SP100P23497 879 aaPredicted RBP14.34□□□□□ -0.11
ATRX-208ENST00000622960 ABCD1P33897 745 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 CLCN4P51793 760 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 DSG1Q02413 1049 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 CUL4AQ13619 759 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 SF3A1Q15459 793 aaKnown RBP14.34□□□□□ -0.11
ATRX-208ENST00000622960 CCDC149Q6ZUS6 474 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 C1orf186Q6ZWK4 172 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 GPR65Q8IYL9 337 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 SLC22A17Q8WUG5 538 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 ACSF2Q96CM8 615 aaPredicted RBP14.34□□□□□ -0.11
ATRX-208ENST00000622960 UROC1Q96N76 676 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 MMTAG2Q9BU76 263 aaKnown RBP14.34□□□□□ -0.11
ATRX-208ENST00000622960 MAN1C1Q9NR34 630 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 SLC38A7Q9NVC3 462 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 MIOSQ9NXC5 875 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 ODF2LQ9ULJ1 636 aa14.34□□□□□ -0.11
ATRX-208ENST00000622960 TEX28O15482 410 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 TRAPPC3O43617 180 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 TBCAO75347 108 aaKnown RBP14.33□□□□□ -0.12
ATRX-208ENST00000622960 FAM13AO94988 1023 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 HSP90AA1P07900 732 aaKnown RBP14.33□□□□□ -0.12
ATRX-208ENST00000622960 MCF2P10911 925 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 HARSP12081 509 aaKnown RBP14.33□□□□□ -0.12
ATRX-208ENST00000622960 GRM5P41594 1212 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 EEF1DP3Q658K8 133 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 MPZL3Q6UWV2 235 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 TMC5Q6UXY8 1006 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 C15orf39Q6ZRI6 1047 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 KCNK18Q7Z418 384 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 CEP57Q86XR8 500 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 PLCD3Q8N3E9 789 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 SPIRE2Q8WWL2 714 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 RIN2Q8WYP3 895 aaPredicted RBP14.33□□□□□ -0.12
ATRX-208ENST00000622960 STAMQ92783 540 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 EDAQ92838 391 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 INTS4Q96HW7 963 aaKnown RBP14.33□□□□□ -0.12
ATRX-208ENST00000622960 MFSD14AQ96MC6 490 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 ACO2Q99798 780 aaKnown RBP14.33□□□□□ -0.12
ATRX-208ENST00000622960 BACH2Q9BYV9 841 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 POMKQ9H5K3 350 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 ARHGAP28Q9P2N2 729 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 ANKFY1Q9P2R3 1169 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 CCDC39Q9UFE4 941 aa14.33□□□□□ -0.12
ATRX-208ENST00000622960 TTLL13PA6NNM8 815 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 K7ELQ4 463 aaPredicted RBP14.32□□□□□ -0.12
ATRX-208ENST00000622960 PTGESO14684 152 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 MTMR3Q13615 1198 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 DHX8Q14562 1220 aaKnown RBP14.32□□□□□ -0.12
ATRX-208ENST00000622960 NOLC1Q14978 699 aaKnown RBP eCLIP14.32□□□□□ -0.12
ATRX-208ENST00000622960 PTPN21Q16825 1174 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 TMEM119Q4V9L6 283 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 NT5DC1Q5TFE4 455 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 CYP26C1Q6V0L0 522 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 GPBP1Q86WP2 473 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 SUGP1Q8IWZ8 645 aaKnown RBP14.32□□□□□ -0.12
ATRX-208ENST00000622960 RNF168Q8IYW5 571 aaPredicted RBP14.32□□□□□ -0.12
ATRX-208ENST00000622960 DAW1Q8N136 415 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 C12orf76Q8N812 135 aaPredicted RBP14.32□□□□□ -0.12
ATRX-208ENST00000622960 GSTCDQ8NEC7 633 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 HASPINQ8TF76 798 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 HDAC7Q8WUI4 952 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 ACAP3Q96P50 834 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 PNMA5Q96PV4 448 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 TTPALQ9BTX7 342 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 TARS2Q9BW92 718 aaKnown RBP14.32□□□□□ -0.12
ATRX-208ENST00000622960 CDT1Q9H211 546 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 ZHX3Q9H4I2 956 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 PLEKHA4Q9H4M7 779 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 PIDD1Q9HB75 910 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 C11orf16Q9NQ32 467 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 FNIP2Q9P278 1114 aa14.32□□□□□ -0.12
ATRX-208ENST00000622960 USP20Q9Y2K6 914 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms