RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 TEX28O15482 410 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 DSG1Q02413 1049 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 GRIN1Q05586 938 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 DMP1Q13316 513 aaPredicted RBP18.88■□□□□ 0.61
HMGN3-203ENST00000620514 NAB2Q15742 525 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 DCAF4L1Q3SXM0 396 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 TMEM119Q4V9L6 283 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 TMC5Q6UXY8 1006 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 SYT2Q8N9I0 419 aaPredicted RBP18.88■□□□□ 0.61
HMGN3-203ENST00000620514 HASPINQ8TF76 798 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 EDAQ92838 391 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 DRC1Q96MC2 740 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 NECTIN4Q96NY8 510 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 TMEM134Q9H6X4 195 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 RXFP1Q9HBX9 757 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 KMT5AQ9NQR1 393 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 CHST7Q9NS84 486 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 TNFSF13BQ9Y275 285 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 PHLPP2Q6ZVD8 1323 aa18.88■□□□□ 0.61
HMGN3-203ENST00000620514 NPHP3-ACAD11A0A0J9YXS1 232 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 SLC16A4O15374 487 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 TADA2AO75478 443 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 THP07101 528 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 PLA2G4BP0C869 781 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 MYBP10242 640 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 GUCY2CP25092 1073 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 MTHFRP42898 656 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 HSP90AA2PQ14568 343 aaPredicted RBP18.87■□□□□ 0.61
HMGN3-203ENST00000620514 KIAA1841Q6NSI8 718 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 BRAPQ7Z569 592 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 CEP120Q8N960 986 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 LRRC15Q8TF66 581 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 CDK5RAP3Q96JB5 506 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 RIPOR3Q96MK2 946 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 ACO2Q99798 780 aaKnown RBP18.87■□□□□ 0.61
HMGN3-203ENST00000620514 TARS2Q9BW92 718 aaKnown RBP18.87■□□□□ 0.61
HMGN3-203ENST00000620514 NT5C3AQ9H0P0 336 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 CDT1Q9H211 546 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 SSX2IPQ9Y2D8 614 aa18.87■□□□□ 0.61
HMGN3-203ENST00000620514 SPDYE4A6NLX3 237 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 C2CD4DB7Z1M9 353 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 KIF4AO95239 1232 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 ADH1AP07327 375 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 SLC12A3P55017 1021 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 ZXDAP98168 799 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 CACNB1Q02641 598 aaPredicted RBP18.86■□□□□ 0.61
HMGN3-203ENST00000620514 SF3A1Q15459 793 aaKnown RBP18.86■□□□□ 0.61
HMGN3-203ENST00000620514 GLRA4Q5JXX5 417 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 ATAT1Q5SQI0 421 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 ZBTB33Q86T24 672 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 GLYCTKQ8IVS8 523 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 RIN2Q8WYP3 895 aaPredicted RBP18.86■□□□□ 0.61
HMGN3-203ENST00000620514 TIPINQ9BVW5 301 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 MRPL4Q9BYD3 311 aaKnown RBP18.86■□□□□ 0.61
HMGN3-203ENST00000620514 SFXN1Q9H9B4 322 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 PTPRHQ9HD43 1115 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 MAN1C1Q9NR34 630 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 HCN4Q9Y3Q4 1203 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 TECTAO75443 2155 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 PLXNA3P51805 1871 aa18.86■□□□□ 0.61
HMGN3-203ENST00000620514 RPL17P18621 184 aaKnown RBP18.85■□□□□ 0.61
HMGN3-203ENST00000620514 IGFBP6P24592 240 aaPredicted RBP18.85■□□□□ 0.61
HMGN3-203ENST00000620514 OSTNP61366 133 aa18.85■□□□□ 0.61
HMGN3-203ENST00000620514 USP41Q3LFD5 358 aa18.85■□□□□ 0.61
HMGN3-203ENST00000620514 ZNF568Q3ZCX4 644 aa18.85■□□□□ 0.61
HMGN3-203ENST00000620514 ARSHQ5FYA8 562 aa18.85■□□□□ 0.61
HMGN3-203ENST00000620514 RTP2Q5QGT7 225 aa18.85■□□□□ 0.61
HMGN3-203ENST00000620514 HFE2Q6ZVN8 426 aa18.85■□□□□ 0.61
HMGN3-203ENST00000620514 GPR149Q86SP6 731 aa18.85■□□□□ 0.61
HMGN3-203ENST00000620514 C17orf75Q9HAS0 396 aa18.85■□□□□ 0.61
HMGN3-203ENST00000620514 NR2E1Q9Y466 385 aa18.85■□□□□ 0.61
HMGN3-203ENST00000620514 RBM19Q9Y4C8 960 aaKnown RBP18.85■□□□□ 0.61
HMGN3-203ENST00000620514 SF3B1O75533 1304 aaKnown RBP eCLIP18.84■□□□□ 0.615e-6■■■■■ 70.8
HMGN3-203ENST00000620514 ABLIM1O14639 778 aa18.84■□□□□ 0.61
HMGN3-203ENST00000620514 GLUD1P00367 558 aa18.84■□□□□ 0.61
HMGN3-203ENST00000620514 SPATA31D3P0C874 917 aa18.84■□□□□ 0.61
HMGN3-203ENST00000620514 PLS3P13797 630 aa18.84■□□□□ 0.61
HMGN3-203ENST00000620514 GRM5P41594 1212 aa18.84■□□□□ 0.61
HMGN3-203ENST00000620514 PRSS55Q6UWB4 352 aaPredicted RBP18.84■□□□□ 0.61
HMGN3-203ENST00000620514 TRIM67Q6ZTA4 783 aa18.84■□□□□ 0.61
HMGN3-203ENST00000620514 SPATA31D4Q6ZUB0 917 aa18.84■□□□□ 0.61
HMGN3-203ENST00000620514 PALB2Q86YC2 1186 aa18.84■□□□□ 0.61
HMGN3-203ENST00000620514 KCTD17Q8N5Z5 321 aa18.84■□□□□ 0.61
HMGN3-203ENST00000620514 SPIRE2Q8WWL2 714 aa18.84■□□□□ 0.61
HMGN3-203ENST00000620514 ZBTB45Q96K62 511 aaPredicted RBP18.84■□□□□ 0.61
HMGN3-203ENST00000620514 AK8Q96MA6 479 aa18.84■□□□□ 0.61
HMGN3-203ENST00000620514 PPP1R10Q96QC0 940 aaKnown RBP18.84■□□□□ 0.61
HMGN3-203ENST00000620514 NTPCRQ9BSD7 190 aaKnown RBP18.84■□□□□ 0.61
HMGN3-203ENST00000620514 FOXD4L1Q9NU39 408 aa18.84■□□□□ 0.61
HMGN3-203ENST00000620514 BLOC1S4Q9NUP1 217 aa18.84■□□□□ 0.61
HMGN3-203ENST00000620514 CLIC4Q9Y696 253 aa18.84■□□□□ 0.61
HMGN3-203ENST00000620514 BMP15O95972 392 aa18.83■□□□□ 0.6
HMGN3-203ENST00000620514 HARSP12081 509 aaKnown RBP18.83■□□□□ 0.6
HMGN3-203ENST00000620514 PROZP22891 400 aa18.83■□□□□ 0.6
HMGN3-203ENST00000620514 UBA7P41226 1012 aa18.83■□□□□ 0.6
HMGN3-203ENST00000620514 DHX8Q14562 1220 aaKnown RBP18.83■□□□□ 0.6
HMGN3-203ENST00000620514 KARSQ15046 597 aaKnown RBP18.83■□□□□ 0.6
HMGN3-203ENST00000620514 PTPN21Q16825 1174 aa18.83■□□□□ 0.6
HMGN3-203ENST00000620514 FAM171A1Q5VUB5 890 aa18.83■□□□□ 0.6
HMGN3-203ENST00000620514 FAM173BQ6P4H8 233 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms