RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 PNPLA7Q6ZV29 1317 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 PKD1L3Q7Z443 1732 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 CIB2O75838 187 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 LMNB1P20700 586 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 COMTP21964 271 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 RXRBP28702 533 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 PTPN4P29074 926 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 ITGA8P53708 1063 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 PLCB3Q01970 1234 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 KDSRQ06136 332 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 SLC34A1Q06495 639 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 TRIM28Q13263 835 aaKnown RBP10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 RNF207Q6ZRF8 634 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 SYT2Q8N9I0 419 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 PRPF31Q8WWY3 499 aaKnown RBP10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 GRAMD1AQ96CP6 724 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 MPP4Q96JB8 637 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 ANKRD27Q96NW4 1050 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 PHACTR1Q9C0D0 580 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 BARHL2Q9NY43 387 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 ARMCX1Q9P291 453 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 PDP2Q9P2J9 529 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 HEY2Q9UBP5 337 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 CES2O00748 559 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 PGM3O95394 542 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 PLA2G4BP0C869 781 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 TRIM49P0CI25 452 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 TRIM49CP0CI26 452 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 MKRN3Q13064 507 aaKnown RBP10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 MTMR2Q13614 643 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 RNF43Q68DV7 783 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 OR52E8Q6IFG1 317 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 CPNE8Q86YQ8 564 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 MAP7D3Q8IWC1 876 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 ZFAND2BQ8WV99 257 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 SERPINB12Q96P63 405 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 FNBP1Q96RU3 617 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 MTA3Q9BTC8 594 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 GANQ9H2C0 597 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 C12orf65Q9H3J6 166 aaKnown RBP10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 TRABDQ9H4I3 376 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 MYH7P12883 1935 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 AFDNP55196 1824 aaKnown RBP10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 NWD2Q9ULI1 1742 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 GPR75-ASB3A0A0A6YYF3 556 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 CYTH3O43739 400 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 CCDC22O60826 627 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 ZNF189O75820 626 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 USP1O94782 785 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 PYGMP11217 842 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 COILP38432 576 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 ACSBG2Q5FVE4 666 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 WASHC2DQ5SRD0 308 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 FOXB2Q5VYV0 432 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 RASSF3Q86WH2 238 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 ZNF184Q99676 751 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 ROPN1BQ9BZX4 212 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 IKZF4Q9H2S9 585 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 SMYD3Q9H7B4 428 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 ROPN1Q9HAT0 212 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 ASB3Q9Y575 518 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 SYNGAP1Q96PV0 1343 aa10.41□□□□□ -0.74
TNFAIP3-210ENST00000620204 N4BP2Q86UW6 1770 aaPredicted RBP10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 C2orf71A6NGG8 1288 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 C6orf229H3BNL8 230 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 CDH16O75309 829 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 TBCAO75347 108 aaKnown RBP10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 TTLL1O95922 423 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 GAS8O95995 478 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 IFNB1P01574 187 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 STAT3P40763 770 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 TMEM62Q0P6H9 643 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 PARP6Q2NL67 630 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 CCDC174Q6PII3 467 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 C4orf50Q6ZRC1 276 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 SLC51AQ86UW1 340 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 PALB2Q86YC2 1186 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 RASGEF1CQ8N431 466 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 SCFD1Q8WVM8 642 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 CLMNQ96JQ2 1002 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 CEP63Q96MT8 703 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 TRAPPC9Q96Q05 1148 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 CRAMP1Q96RY5 1269 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 SAYSD1Q9NPB0 183 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 ATXN10Q9UBB4 475 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 AJAP1Q9UKB5 411 aaPredicted RBP10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 E7ENQ6 273 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 GOLGA8SH3BPF8 625 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 GOLGA8MH3BSY2 632 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 EXOC3O60645 756 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 NTSR2O95665 410 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 LYNP07948 512 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 EEF2P13639 858 aaKnown RBP10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 ATP6V1B1P15313 513 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 MAGEA10P43363 369 aaPredicted RBP10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 RTP1P59025 263 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 SGSM1Q2NKQ1 1148 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 C1orf146Q5VVC0 180 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 TRMT10CQ7L0Y3 403 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms