RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 METTL14Q9HCE5 456 aaKnown RBP11.57□□□□□ -0.56
UPF3A-212ENST00000619079 LGALS13Q9UHV8 139 aa11.57□□□□□ -0.56
UPF3A-212ENST00000619079 SBF1O95248 1867 aa11.57□□□□□ -0.56
UPF3A-212ENST00000619079 KDM3AQ9Y4C1 1321 aa11.57□□□□□ -0.56
UPF3A-212ENST00000619079 ESYT2A0FGR8 921 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 GLTPD2A6NH11 291 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 MAGEB2O15479 319 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 MAP3K13O43283 966 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 TAC1P20366 129 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 TARSP26639 723 aaKnown RBP11.56□□□□□ -0.56
UPF3A-212ENST00000619079 COPB2P35606 906 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 HADHBP55084 474 aaKnown RBP11.56□□□□□ -0.56
UPF3A-212ENST00000619079 DACT2Q5SW24 774 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 SEL1L2Q5TEA6 688 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 C11orf63Q6NUN7 778 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 NELFCDQ8IXH7 590 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 RBM12BQ8IXT5 1001 aaKnown RBP11.56□□□□□ -0.56
UPF3A-212ENST00000619079 ANKRD35Q8N283 1001 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 MIPOL1Q8TD10 442 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 KIAA1683Q9H0B3 1180 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 ZWILCHQ9H900 591 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 KANSL2Q9H9L4 492 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 OSGEPQ9NPF4 335 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 DCP1AQ9NPI6 582 aaPredicted RBP11.56□□□□□ -0.56
UPF3A-212ENST00000619079 EMILIN3Q9NT22 766 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 PCMTD2Q9NV79 361 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 LMCD1Q9NZU5 365 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 WHRNQ9P202 907 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 LNPEPQ9UIQ6 1025 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 HAO1Q9UJM8 370 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 ROBO3Q96MS0 1386 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 SIGLEC16A6NMB1 481 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 H0Y3Z8 333 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 HGSO14964 777 aaPredicted RBP11.56□□□□□ -0.56
UPF3A-212ENST00000619079 CYTH3O43739 400 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 TJP3O95049 919 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 PENKP01210 267 aaPredicted RBP11.56□□□□□ -0.56
UPF3A-212ENST00000619079 VIL1P09327 827 aaKnown RBP11.56□□□□□ -0.56
UPF3A-212ENST00000619079 PLCG2P16885 1265 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 YY1P25490 414 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 PTPN4P29074 926 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 GMPSP49915 693 aaPredicted RBP11.56□□□□□ -0.56
UPF3A-212ENST00000619079 CACNA2D1P54289 1103 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 CYP1B1Q16678 543 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 CCDC25Q86WR0 208 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 OGFOD1Q8N543 542 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 DENND2DQ9H6A0 471 aaPredicted RBP11.56□□□□□ -0.56
UPF3A-212ENST00000619079 SAR1AQ9NR31 198 aa11.56□□□□□ -0.56
UPF3A-212ENST00000619079 PALM3A6NDB9 673 aaPredicted RBP11.55□□□□□ -0.56
UPF3A-212ENST00000619079 SLC26A4O43511 780 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 CDH16O75309 829 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 MYBL1P10243 752 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 RASA1P20936 1047 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 MAGEA8P43361 318 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 TFAP4Q01664 338 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 ZNF211Q13398 564 aaPredicted RBP11.55□□□□□ -0.56
UPF3A-212ENST00000619079 EPHA7Q15375 998 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 SNX30Q5VWJ9 437 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 RGS9BPQ6ZS82 235 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 DNAAF5Q86Y56 855 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 CCDC105Q8IYK2 499 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 SCFD1Q8WVM8 642 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 ALG3Q92685 438 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 SLC7A6OSQ96CW6 309 aaPredicted RBP11.55□□□□□ -0.56
UPF3A-212ENST00000619079 NR1H4Q96RI1 486 aaPredicted RBP11.55□□□□□ -0.56
UPF3A-212ENST00000619079 PPP1R12CQ9BZL4 782 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 MLXIPLQ9NP71 852 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 ATXN10Q9UBB4 475 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 TMCO1Q9UM00 188 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 CHKBQ9Y259 395 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 PCDHA2Q9Y5H9 948 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 MYO3BQ8WXR4 1341 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 ANKRD62A6NC57 917 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 hCG_1984214I3L0E3 225 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 ATP9AO75110 1047 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 COQ9O75208 318 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 ACSL3O95573 720 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 ECEL1O95672 775 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 TTC4O95801 387 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 GH1P01241 217 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 LDHBP07195 334 aaKnown RBP11.55□□□□□ -0.56
UPF3A-212ENST00000619079 EPHB2P29323 1055 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 RBM5P52756 815 aaKnown RBP eCLIP11.55□□□□□ -0.56
UPF3A-212ENST00000619079 CAV1Q03135 178 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 RNASELQ05823 741 aaKnown RBP11.55□□□□□ -0.56
UPF3A-212ENST00000619079 NR1H3Q13133 447 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 KCTD19Q17RG1 926 aaPredicted RBP11.55□□□□□ -0.56
UPF3A-212ENST00000619079 HERC4Q5GLZ8 1057 aaPredicted RBP11.55□□□□□ -0.56
UPF3A-212ENST00000619079 UBAP2Q5T6F2 1119 aaKnown RBP11.55□□□□□ -0.56
UPF3A-212ENST00000619079 LCA5Q86VQ0 697 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 DZIP1Q86YF9 867 aaKnown RBP11.55□□□□□ -0.56
UPF3A-212ENST00000619079 RIBC1Q8N443 379 aaPredicted RBP11.55□□□□□ -0.56
UPF3A-212ENST00000619079 ZNF713Q8N859 430 aaPredicted RBP11.55□□□□□ -0.56
UPF3A-212ENST00000619079 MORC4Q8TE76 937 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 UCMAQ8WVF2 138 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 CCDC77Q9BR77 488 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 TUBB6Q9BUF5 446 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 TYW1Q9NV66 732 aaKnown RBP11.55□□□□□ -0.56
UPF3A-212ENST00000619079 PHF24Q9UPV7 400 aa11.55□□□□□ -0.56
UPF3A-212ENST00000619079 TRAF3IP3Q9Y228 551 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms