RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 MSLNLQ96KJ4 702 aa24.33■■□□□ 1.49
CBWD3-212ENST00000616550 SPTBN5Q9NRC6 3674 aaKnown RBP24.33■■□□□ 1.48
CBWD3-212ENST00000616550 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.32■■□□□ 1.48
CBWD3-212ENST00000616550 SPTLC2O15270 562 aa24.32■■□□□ 1.48
CBWD3-212ENST00000616550 TBCAO75347 108 aaKnown RBP24.32■■□□□ 1.48
CBWD3-212ENST00000616550 THP07101 528 aa24.32■■□□□ 1.48
CBWD3-212ENST00000616550 COASYQ13057 564 aa24.32■■□□□ 1.48
CBWD3-212ENST00000616550 ZBTB33Q86T24 672 aa24.32■■□□□ 1.48
CBWD3-212ENST00000616550 AUTS2Q8WXX7 1259 aa24.32■■□□□ 1.48
CBWD3-212ENST00000616550 VN1R3Q9BXE9 311 aa24.32■■□□□ 1.48
CBWD3-212ENST00000616550 ZHX3Q9H4I2 956 aa24.32■■□□□ 1.48
CBWD3-212ENST00000616550 PARVGQ9HBI0 331 aa24.32■■□□□ 1.48
CBWD3-212ENST00000616550 PTPRHQ9HD43 1115 aa24.32■■□□□ 1.48
CBWD3-212ENST00000616550 IRAK3Q9Y616 596 aa24.32■■□□□ 1.48
CBWD3-212ENST00000616550 TTC28Q96AY4 2481 aa24.32■■□□□ 1.48
CBWD3-212ENST00000616550 NCOR1O75376 2440 aa24.31■■□□□ 1.48
CBWD3-212ENST00000616550 MBTPS2O43462 519 aa24.31■■□□□ 1.48
CBWD3-212ENST00000616550 F13A1P00488 732 aa24.31■■□□□ 1.48
CBWD3-212ENST00000616550 YARSP54577 528 aaKnown RBP24.31■■□□□ 1.48
CBWD3-212ENST00000616550 NCKAP1LP55160 1127 aa24.31■■□□□ 1.48
CBWD3-212ENST00000616550 RBM10P98175 930 aaKnown RBP24.31■■□□□ 1.48
CBWD3-212ENST00000616550 TUSC3Q13454 348 aa24.31■■□□□ 1.48
CBWD3-212ENST00000616550 LLGL2Q6P1M3 1020 aa24.31■■□□□ 1.48
CBWD3-212ENST00000616550 TMEM184AQ6ZMB5 413 aa24.31■■□□□ 1.48
CBWD3-212ENST00000616550 CCDC73Q6ZRK6 1079 aa24.31■■□□□ 1.48
CBWD3-212ENST00000616550 HAUS6Q7Z4H7 955 aa24.31■■□□□ 1.48
CBWD3-212ENST00000616550 FAM178BQ8IXR5 827 aa24.31■■□□□ 1.48
CBWD3-212ENST00000616550 VN1R2Q8NFZ6 395 aa24.31■■□□□ 1.48
CBWD3-212ENST00000616550 CCDC94Q9BW85 323 aaPredicted RBP24.31■■□□□ 1.48
CBWD3-212ENST00000616550 CDT1Q9H211 546 aa24.31■■□□□ 1.48
CBWD3-212ENST00000616550 MARCH5Q9NX47 278 aa24.31■■□□□ 1.48
CBWD3-212ENST00000616550 CLASP2O75122 1294 aaKnown RBP24.3■■□□□ 1.48
CBWD3-212ENST00000616550 PPP6R2O75170 966 aa24.3■■□□□ 1.48
CBWD3-212ENST00000616550 YEATS4O95619 227 aa24.3■■□□□ 1.48
CBWD3-212ENST00000616550 MCF2P10911 925 aa24.3■■□□□ 1.48
CBWD3-212ENST00000616550 SCP2P22307 547 aa24.3■■□□□ 1.48
CBWD3-212ENST00000616550 GRM5P41594 1212 aa24.3■■□□□ 1.48
CBWD3-212ENST00000616550 ZNF131P52739 623 aa24.3■■□□□ 1.48
CBWD3-212ENST00000616550 KCNC3Q14003 757 aa24.3■■□□□ 1.48
CBWD3-212ENST00000616550 MPZL3Q6UWV2 235 aa24.3■■□□□ 1.48
CBWD3-212ENST00000616550 SV2BQ7L1I2 683 aa24.3■■□□□ 1.48
CBWD3-212ENST00000616550 MRPL17Q9NRX2 175 aaKnown RBP24.3■■□□□ 1.48
CBWD3-212ENST00000616550 TOPORSQ9NS56 1045 aaPredicted RBP24.3■■□□□ 1.48
CBWD3-212ENST00000616550 SSX2IPQ9Y2D8 614 aa24.3■■□□□ 1.48
CBWD3-212ENST00000616550 TRIP11Q15643 1979 aa24.3■■□□□ 1.48
CBWD3-212ENST00000616550 PTGESO14684 152 aa24.29■■□□□ 1.48
CBWD3-212ENST00000616550 TRAK2O60296 914 aa24.29■■□□□ 1.48
CBWD3-212ENST00000616550 TOM1L1O75674 476 aa24.29■■□□□ 1.48
CBWD3-212ENST00000616550 SOD2P04179 222 aa24.29■■□□□ 1.48
CBWD3-212ENST00000616550 PROZP22891 400 aa24.29■■□□□ 1.48
CBWD3-212ENST00000616550 OSTNP61366 133 aa24.29■■□□□ 1.48
CBWD3-212ENST00000616550 SMAD2Q15796 467 aaKnown RBP24.29■■□□□ 1.48
CBWD3-212ENST00000616550 FOXD4L6Q3SYB3 417 aaPredicted RBP24.29■■□□□ 1.48
CBWD3-212ENST00000616550 FOXD4L3Q6VB84 417 aaPredicted RBP24.29■■□□□ 1.48
CBWD3-212ENST00000616550 ZPBP2Q6X784 338 aa24.29■■□□□ 1.48
CBWD3-212ENST00000616550 SMRP1Q8NCR6 262 aa24.29■■□□□ 1.48
CBWD3-212ENST00000616550 CASP10Q92851 521 aa24.29■■□□□ 1.48
CBWD3-212ENST00000616550 BICD1Q96G01 975 aa24.29■■□□□ 1.48
CBWD3-212ENST00000616550 PANK2Q9BZ23 570 aa24.29■■□□□ 1.48
CBWD3-212ENST00000616550 K7ENM7 598 aa24.28■■□□□ 1.48
CBWD3-212ENST00000616550 TADA2AO75478 443 aa24.28■■□□□ 1.48
CBWD3-212ENST00000616550 URODP06132 367 aa24.28■■□□□ 1.48
CBWD3-212ENST00000616550 STAT6P42226 847 aa24.28■■□□□ 1.48
CBWD3-212ENST00000616550 MATR3P43243 847 aaKnown RBP eCLIP24.28■■□□□ 1.48
CBWD3-212ENST00000616550 HSP90AA2PQ14568 343 aaPredicted RBP24.28■■□□□ 1.48
CBWD3-212ENST00000616550 PTPN14Q15678 1187 aa24.28■■□□□ 1.48
CBWD3-212ENST00000616550 ANKRD54Q6NXT1 300 aa24.28■■□□□ 1.48
CBWD3-212ENST00000616550 ZBTB45Q96K62 511 aaPredicted RBP24.28■■□□□ 1.48
CBWD3-212ENST00000616550 ACAP3Q96P50 834 aa24.28■■□□□ 1.48
CBWD3-212ENST00000616550 HERC2P3Q9BVR0 1158 aa24.28■■□□□ 1.48
CBWD3-212ENST00000616550 EMILIN2Q9BXX0 1053 aa24.28■■□□□ 1.48
CBWD3-212ENST00000616550 CXCL16Q9H2A7 254 aa24.28■■□□□ 1.48
CBWD3-212ENST00000616550 ANKFY1Q9P2R3 1169 aa24.28■■□□□ 1.48
CBWD3-212ENST00000616550 PRKAG3Q9UGI9 489 aa24.28■■□□□ 1.48
CBWD3-212ENST00000616550 ADAM28Q9UKQ2 775 aa24.28■■□□□ 1.48
CBWD3-212ENST00000616550 CASTOR2A6NHX0 329 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 F8W810 466 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 CLDN3O15551 220 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 BRD1O95696 1058 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 HARSP12081 509 aaKnown RBP24.27■■□□□ 1.48
CBWD3-212ENST00000616550 ABCD1P33897 745 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 PKP1Q13835 747 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 ATL3Q6DD88 541 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 KIAA1841Q6NSI8 718 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 DYMQ7RTS9 669 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 TAS1R1Q7RTX1 841 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 PPFIBP1Q86W92 1011 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 CEP120Q8N960 986 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 RABGGTAQ92696 567 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 KCNN1Q92952 543 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 TBX20Q9UMR3 447 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 HCFC2Q9Y5Z7 792 aa24.27■■□□□ 1.48
CBWD3-212ENST00000616550 C2CD2LO14523 706 aa24.26■■□□□ 1.47
CBWD3-212ENST00000616550 ABLIM1O14639 778 aa24.26■■□□□ 1.47
CBWD3-212ENST00000616550 HOXB8P17481 243 aaPredicted RBP24.26■■□□□ 1.47
CBWD3-212ENST00000616550 SSTR3P32745 418 aaPredicted RBP24.26■■□□□ 1.47
CBWD3-212ENST00000616550 GLUD2P49448 558 aa24.26■■□□□ 1.47
CBWD3-212ENST00000616550 LIG4P49917 911 aa24.26■■□□□ 1.47
CBWD3-212ENST00000616550 NOLC1Q14978 699 aaKnown RBP eCLIP24.26■■□□□ 1.47
CBWD3-212ENST00000616550 GLRA4Q5JXX5 417 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms