RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 CFAP57Q96MR6 1250 aa13.38□□□□□ -0.27
MSH6-213ENST00000614496 ABCF3Q9NUQ8 709 aa13.38□□□□□ -0.27
MSH6-213ENST00000614496 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.38□□□□□ -0.27
MSH6-213ENST00000614496 FOXO6A8MYZ6 492 aa13.38□□□□□ -0.27
MSH6-213ENST00000614496 DNM1LO00429 736 aa13.38□□□□□ -0.27
MSH6-213ENST00000614496 MARSP56192 900 aaKnown RBP13.38□□□□□ -0.27
MSH6-213ENST00000614496 C6orf163Q5TEZ5 329 aa13.38□□□□□ -0.27
MSH6-213ENST00000614496 MOXD1Q6UVY6 613 aa13.38□□□□□ -0.27
MSH6-213ENST00000614496 COL23A1Q86Y22 540 aaPredicted RBP13.38□□□□□ -0.27
MSH6-213ENST00000614496 MCF2L2Q86YR7 1114 aa13.38□□□□□ -0.27
MSH6-213ENST00000614496 SUPT20HQ8NEM7 779 aa13.38□□□□□ -0.27
MSH6-213ENST00000614496 OSBPL7Q9BZF2 842 aa13.38□□□□□ -0.27
MSH6-213ENST00000614496 GOLGA8RI6L899 631 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 KIAA0391O15091 583 aaKnown RBP13.37□□□□□ -0.27
MSH6-213ENST00000614496 GGPS1O95749 300 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 RARGP13631 454 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 DRD4P21917 467 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 BPIFB4P59827 614 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 PPP3CAQ08209 521 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 GPS1Q13098 491 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 PLCB4Q15147 1175 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 KCNV1Q6PIU1 500 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 SCARA5Q6ZMJ2 495 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 CEP128Q6ZU80 1094 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 PRELID2Q8N945 189 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 ARL2BPQ9Y2Y0 163 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 NUP98P52948 1817 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 BCL9LQ86UU0 1499 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 CICQ96RK0 1608 aaPredicted RBP13.37□□□□□ -0.27
MSH6-213ENST00000614496 TLR3O15455 904 aaKnown RBP13.37□□□□□ -0.27
MSH6-213ENST00000614496 RIPK2O43353 540 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 RFX1P22670 979 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 ANKMY2Q8IV38 441 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 SCYL3Q8IZE3 742 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 NSMCE1Q8WV22 266 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 PWWP2AQ96N64 755 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 RMDN3Q96TC7 470 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 ATF5Q9Y2D1 282 aaPredicted RBP13.37□□□□□ -0.27
MSH6-213ENST00000614496 RALAP11233 206 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 TSNAXIP1Q2TAA8 658 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 SYCP2LQ5T4T6 812 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 TRMT10CQ7L0Y3 403 aaKnown RBP13.37□□□□□ -0.27
MSH6-213ENST00000614496 GBP7Q8N8V2 638 aaPredicted RBP13.37□□□□□ -0.27
MSH6-213ENST00000614496 RBM15Q96T37 977 aaKnown RBP eCLIP13.37□□□□□ -0.278e-10■■□□□ 12.9
MSH6-213ENST00000614496 ZWILCHQ9H900 591 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 KCNH7Q9NS40 1196 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 SUFUQ9UMX1 484 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 USP20Q9Y2K6 914 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 LRP6O75581 1613 aa13.37□□□□□ -0.27
MSH6-213ENST00000614496 CFAP73A6NFT4 308 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 SNHG28P0DPA3 235 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 RASSF2P50749 326 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 YWHAGP61981 247 aaKnown RBP eCLIP13.36□□□□□ -0.27
MSH6-213ENST00000614496 GABPAQ06546 454 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 DNAJC3Q13217 504 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 ALCAMQ13740 583 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 P3H1Q32P28 736 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 HYIQ5T013 277 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 ERMARDQ5T6L9 678 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 DUPD1Q68J44 220 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 CCDC62Q6P9F0 684 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 C1orf186Q6ZWK4 172 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 ZBTB33Q86T24 672 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 ZBED8Q8IZ13 594 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 ATL2Q8NHH9 583 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 ACSF2Q96CM8 615 aaPredicted RBP13.36□□□□□ -0.27
MSH6-213ENST00000614496 STAMBPL1Q96FJ0 436 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 MRPL47Q9HD33 250 aaKnown RBP13.36□□□□□ -0.27
MSH6-213ENST00000614496 A0A0G2JND7 137 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 TCRBV7S2A1N4TA0A589 114 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 APBA3O96018 575 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 ADRA2BP18089 450 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 ACOT2P49753 483 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 SOX10P56693 466 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 OSTNP61366 133 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 BASP1P80723 227 aaKnown RBP13.36□□□□□ -0.27
MSH6-213ENST00000614496 SPARCL1Q14515 664 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 DAB2IPQ5VWQ8 1189 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 DNAJC24Q6P3W2 148 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 NOP9Q86U38 636 aaKnown RBP13.36□□□□□ -0.27
MSH6-213ENST00000614496 PPFIBP2Q8ND30 876 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 MASTLQ96GX5 879 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 TXLNGQ9NUQ3 528 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 GABBR1Q9UBS5 961 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 CHD4Q14839 1912 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 SNED1Q8TER0 1413 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 PPFIA2O75334 1257 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 YTHDF3Q7Z739 585 aaKnown RBP13.36□□□□□ -0.27
MSH6-213ENST00000614496 TAS1R2Q8TE23 839 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 SLC5A5Q92911 643 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 LRRC37BQ96QE4 947 aa13.36□□□□□ -0.27
MSH6-213ENST00000614496 KLF6Q99612 283 aaPredicted RBP13.36□□□□□ -0.27
MSH6-213ENST00000614496 BTNL10A8MVZ5 291 aa13.35□□□□□ -0.27
MSH6-213ENST00000614496 PDHA1P08559 390 aa13.35□□□□□ -0.27
MSH6-213ENST00000614496 CYP11B1P15538 503 aa13.35□□□□□ -0.27
MSH6-213ENST00000614496 ITIH2P19823 946 aa13.35□□□□□ -0.27
MSH6-213ENST00000614496 ERP27Q96DN0 273 aa13.35□□□□□ -0.27
MSH6-213ENST00000614496 WDR18Q9BV38 432 aa13.35□□□□□ -0.27
MSH6-213ENST00000614496 KDM4CQ9H3R0 1056 aa13.35□□□□□ -0.27
MSH6-213ENST00000614496 UVRAGQ9P2Y5 699 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms