RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 UBOX5O94941 541 aa23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 FERP16591 822 aa23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 RPS6P62753 249 aaKnown RBP23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 ATP11AP98196 1134 aa23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 RAPGEF1Q13905 1077 aa23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 DENND2CQ68D51 928 aa23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 ANKRD35Q8N283 1001 aa23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 CHST13Q8NET6 341 aa23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 RGS16O15492 202 aaPredicted RBP23.54■■□□□ 1.36
POLR2J3-220ENST00000613744 SUN1O94901 812 aa23.54■■□□□ 1.36
POLR2J3-220ENST00000613744 POLR2MP0CAP2 368 aa23.54■■□□□ 1.36
POLR2J3-220ENST00000613744 PMS2P54278 862 aa23.54■■□□□ 1.36
POLR2J3-220ENST00000613744 TKFCQ3LXA3 575 aa23.54■■□□□ 1.36
POLR2J3-220ENST00000613744 ZCWPW2Q504Y3 356 aa23.54■■□□□ 1.36
POLR2J3-220ENST00000613744 RNF207Q6ZRF8 634 aa23.54■■□□□ 1.36
POLR2J3-220ENST00000613744 MFN1Q8IWA4 741 aa23.54■■□□□ 1.36
POLR2J3-220ENST00000613744 TBCKQ8TEA7 893 aa23.54■■□□□ 1.36
POLR2J3-220ENST00000613744 ATP8B4Q8TF62 1192 aa23.54■■□□□ 1.36
POLR2J3-220ENST00000613744 ABCF3Q9NUQ8 709 aa23.54■■□□□ 1.36
POLR2J3-220ENST00000613744 ATP8A1Q9Y2Q0 1164 aa23.54■■□□□ 1.36
POLR2J3-220ENST00000613744 PGK2P07205 417 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 VIMP08670 466 aaKnown RBP23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 CLK2P49760 499 aaKnown RBP23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 KCNJ2P63252 427 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 ANKRD20A2Q5SQ80 823 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 ANKRD20A1Q5TYW2 823 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 ANKRD20A3Q5VUR7 823 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 PEX26Q7Z412 305 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 KLHL29Q96CT2 875 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 MMTAG2Q9BU76 263 aaKnown RBP23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 GLT8D2Q9H1C3 349 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 EPB41L4BQ9H329 900 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 COL20A1Q9P218 1284 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 MYMKA6NI61 221 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 PEX19P40855 299 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 LETM2Q2VYF4 491 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 TNFAIP8L3Q5GJ75 292 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 TAOK1Q7L7X3 1001 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 MCF2L2Q86YR7 1114 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 SPDYE1Q8NFV5 336 aaPredicted RBP23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 NAP1L3Q99457 506 aaPredicted RBP23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 ARHGAP39Q9C0H5 1083 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 GANQ9H2C0 597 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 ZDHHC18Q9NUE0 388 aa23.53■■□□□ 1.36
POLR2J3-220ENST00000613744 MSH2P43246 934 aa23.52■■□□□ 1.36
POLR2J3-220ENST00000613744 PTENP60484 403 aa23.52■■□□□ 1.36
POLR2J3-220ENST00000613744 UBXN2AP68543 259 aa23.52■■□□□ 1.36
POLR2J3-220ENST00000613744 DUPD1Q68J44 220 aa23.52■■□□□ 1.36
POLR2J3-220ENST00000613744 GPR142Q7Z601 462 aa23.52■■□□□ 1.36
POLR2J3-220ENST00000613744 TRIM59Q8IWR1 403 aa23.52■■□□□ 1.36
POLR2J3-220ENST00000613744 HPS3Q969F9 1004 aa23.52■■□□□ 1.36
POLR2J3-220ENST00000613744 MMP19Q99542 508 aa23.52■■□□□ 1.36
POLR2J3-220ENST00000613744 MROH8Q9H579 483 aa23.52■■□□□ 1.36
POLR2J3-220ENST00000613744 CYP39A1Q9NYL5 469 aa23.52■■□□□ 1.36
POLR2J3-220ENST00000613744 LINGO3P0C6S8 592 aa23.52■■□□□ 1.35
POLR2J3-220ENST00000613744 CTGFP29279 349 aa23.52■■□□□ 1.35
POLR2J3-220ENST00000613744 CNTN2Q02246 1040 aa23.52■■□□□ 1.35
POLR2J3-220ENST00000613744 DHX34Q14147 1143 aaKnown RBP23.52■■□□□ 1.35
POLR2J3-220ENST00000613744 ASRGL1Q7L266 308 aa23.52■■□□□ 1.35
POLR2J3-220ENST00000613744 MYOCDQ8IZQ8 938 aa23.52■■□□□ 1.35
POLR2J3-220ENST00000613744 HES6Q96HZ4 224 aa23.52■■□□□ 1.35
POLR2J3-220ENST00000613744 BLOC1S4Q9NUP1 217 aa23.52■■□□□ 1.35
POLR2J3-220ENST00000613744 CTNNAL1Q9UBT7 734 aa23.52■■□□□ 1.35
POLR2J3-220ENST00000613744 FBXO40Q9UH90 709 aa23.52■■□□□ 1.35
POLR2J3-220ENST00000613744 NENFQ9UMX5 172 aa23.52■■□□□ 1.35
POLR2J3-220ENST00000613744 PRKCIP41743 596 aa23.51■■□□□ 1.35
POLR2J3-220ENST00000613744 SSR1P43307 286 aaKnown RBP23.51■■□□□ 1.35
POLR2J3-220ENST00000613744 HSD17B4P51659 736 aa23.51■■□□□ 1.35
POLR2J3-220ENST00000613744 SLC30A9Q6PML9 568 aa23.51■■□□□ 1.35
POLR2J3-220ENST00000613744 FAM133AQ8N9E0 248 aa23.51■■□□□ 1.35
POLR2J3-220ENST00000613744 SHCBP1Q8NEM2 672 aa23.51■■□□□ 1.35
POLR2J3-220ENST00000613744 SYTL5Q8TDW5 730 aaPredicted RBP23.51■■□□□ 1.35
POLR2J3-220ENST00000613744 LARP4BQ92615 738 aaKnown RBP23.51■■□□□ 1.35
POLR2J3-220ENST00000613744 RAB3IPQ96QF0 476 aaPredicted RBP23.51■■□□□ 1.35
POLR2J3-220ENST00000613744 PRMT1Q99873 361 aaKnown RBP23.51■■□□□ 1.35
POLR2J3-220ENST00000613744 ERP44Q9BS26 406 aa23.51■■□□□ 1.35
POLR2J3-220ENST00000613744 BEGAINQ9BUH8 593 aa23.51■■□□□ 1.35
POLR2J3-220ENST00000613744 SPDYE3A6NKU9 549 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 CCNT1O60563 726 aaKnown RBP23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 GJB6O95452 261 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 GRB10Q13322 594 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 PDCD2Q16342 344 aaPredicted RBP23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 NEK8Q86SG6 692 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 GPIHBP1Q8IV16 184 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 NAF1Q96HR8 494 aaKnown RBP23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 TAAR1Q96RJ0 339 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 TRIM7Q9C029 511 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 ZSWIM8A7E2V4 1837 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 ITGA4P13612 1032 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 CAP1Q01518 475 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 KCTD2Q14681 263 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 CNGA2Q16280 664 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 ERICH1Q86X53 443 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 PARD3BQ8TEW8 1205 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 ZFAND2BQ8WV99 257 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 ANO3Q9BYT9 981 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 DPH5Q9H2P9 285 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 PARP2Q9UGN5 583 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms