RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 MAEAQ7L5Y9 396 aa23.13■■□□□ 1.29
VIM-AS1-202ENST00000605833 HDAC7Q8WUI4 952 aa23.13■■□□□ 1.29
VIM-AS1-202ENST00000605833 PLEKHA4Q9H4M7 779 aa23.13■■□□□ 1.29
VIM-AS1-202ENST00000605833 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.13■■□□□ 1.29
VIM-AS1-202ENST00000605833 ANKEF1Q9NU02 776 aa23.13■■□□□ 1.29
VIM-AS1-202ENST00000605833 PCDHA12Q9UN75 941 aa23.13■■□□□ 1.29
VIM-AS1-202ENST00000605833 ZNF292O60281 2723 aa23.13■■□□□ 1.29
VIM-AS1-202ENST00000605833 LRRIQ4A6NIV6 560 aa23.12■■□□□ 1.29
VIM-AS1-202ENST00000605833 SEC24BO95487 1268 aa23.12■■□□□ 1.29
VIM-AS1-202ENST00000605833 LAMP2P13473 410 aa23.12■■□□□ 1.29
VIM-AS1-202ENST00000605833 NFKBIZQ9BYH8 718 aa23.12■■□□□ 1.29
VIM-AS1-202ENST00000605833 PRKD2Q9BZL6 878 aa23.12■■□□□ 1.29
VIM-AS1-202ENST00000605833 TTC12Q9H892 705 aaPredicted RBP23.12■■□□□ 1.29
VIM-AS1-202ENST00000605833 ZDHHC7Q9NXF8 308 aa23.12■■□□□ 1.29
VIM-AS1-202ENST00000605833 VWA8A3KMH1 1905 aa23.12■■□□□ 1.29
VIM-AS1-202ENST00000605833 DMXL1Q9Y485 3027 aa23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 CASTOR2A6NHX0 329 aa23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 POTEMA6NI47 508 aa23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 TADA2AO75478 443 aa23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 PAPLNO95428 1278 aa23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 DCNP07585 359 aaKnown RBP23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 FDPSP14324 419 aaKnown RBP23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 TXKP42681 527 aa23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 HTR4Q13639 388 aa23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 HSP90AA2PQ14568 343 aaPredicted RBP23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 LILRA6Q6PI73 481 aa23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 NECAB1Q8N987 351 aa23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 BRMS1Q9HCU9 246 aa23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 ARHGEF3Q9NR81 526 aa23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 FNIP2Q9P278 1114 aa23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 NUMBLQ9Y6R0 609 aa23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 R4GN57 208 aa23.11■■□□□ 1.29
VIM-AS1-202ENST00000605833 SF3B1O75533 1304 aaKnown RBP eCLIP23.1■■□□□ 1.29
VIM-AS1-202ENST00000605833 FRYLO94915 3013 aa23.1■■□□□ 1.29
VIM-AS1-202ENST00000605833 A0A1B0GUA9 196 aa23.1■■□□□ 1.29
VIM-AS1-202ENST00000605833 NEMFO60524 1076 aa23.1■■□□□ 1.29
VIM-AS1-202ENST00000605833 LARGE1O95461 756 aa23.1■■□□□ 1.29
VIM-AS1-202ENST00000605833 NTHL1P78549 312 aa23.1■■□□□ 1.29
VIM-AS1-202ENST00000605833 WASF1Q92558 559 aa23.1■■□□□ 1.29
VIM-AS1-202ENST00000605833 CXCL16Q9H2A7 254 aa23.1■■□□□ 1.29
VIM-AS1-202ENST00000605833 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.1■■□□□ 1.29
VIM-AS1-202ENST00000605833 TTLL13PA6NNM8 815 aa23.09■■□□□ 1.29
VIM-AS1-202ENST00000605833 ZMYND10O75800 440 aa23.09■■□□□ 1.29
VIM-AS1-202ENST00000605833 KIF4AO95239 1232 aa23.09■■□□□ 1.29
VIM-AS1-202ENST00000605833 CREMQ03060 361 aa23.09■■□□□ 1.29
VIM-AS1-202ENST00000605833 GRASPQ7Z6J2 395 aaPredicted RBP23.09■■□□□ 1.29
VIM-AS1-202ENST00000605833 KCNG4Q8TDN1 519 aa23.09■■□□□ 1.29
VIM-AS1-202ENST00000605833 NXPE3Q969Y0 559 aa23.09■■□□□ 1.29
VIM-AS1-202ENST00000605833 UPF2Q9HAU5 1272 aaKnown RBP23.09■■□□□ 1.29
VIM-AS1-202ENST00000605833 FBXW11Q9UKB1 542 aa23.09■■□□□ 1.29
VIM-AS1-202ENST00000605833 MIA3Q5JRA6 1907 aa23.09■■□□□ 1.29
VIM-AS1-202ENST00000605833 ZMYM2Q9UBW7 1377 aa23.09■■□□□ 1.29
VIM-AS1-202ENST00000605833 EP300Q09472 2414 aaPredicted RBP23.08■■□□□ 1.29
VIM-AS1-202ENST00000605833 BTBD18B2RXH4 712 aa23.08■■□□□ 1.29
VIM-AS1-202ENST00000605833 ANHXE9PGG2 379 aa23.08■■□□□ 1.29
VIM-AS1-202ENST00000605833 FSHRP23945 695 aa23.08■■□□□ 1.29
VIM-AS1-202ENST00000605833 ID4P47928 161 aa23.08■■□□□ 1.29
VIM-AS1-202ENST00000605833 TUSC3Q13454 348 aa23.08■■□□□ 1.29
VIM-AS1-202ENST00000605833 CEP57Q86XR8 500 aa23.08■■□□□ 1.29
VIM-AS1-202ENST00000605833 RPP25Q9BUL9 199 aaKnown RBP23.08■■□□□ 1.29
VIM-AS1-202ENST00000605833 BACH2Q9BYV9 841 aa23.08■■□□□ 1.29
VIM-AS1-202ENST00000605833 FOXQ1Q9C009 403 aa23.08■■□□□ 1.29
VIM-AS1-202ENST00000605833 USP20Q9Y2K6 914 aa23.08■■□□□ 1.29
VIM-AS1-202ENST00000605833 PTGESO14684 152 aa23.07■■□□□ 1.28
VIM-AS1-202ENST00000605833 FOXK2Q01167 660 aa23.07■■□□□ 1.28
VIM-AS1-202ENST00000605833 PSMD5Q16401 504 aa23.07■■□□□ 1.28
VIM-AS1-202ENST00000605833 FAM171A1Q5VUB5 890 aa23.07■■□□□ 1.28
VIM-AS1-202ENST00000605833 PPP4R3CPQ6ZMV5 832 aa23.07■■□□□ 1.28
VIM-AS1-202ENST00000605833 GPR65Q8IYL9 337 aa23.07■■□□□ 1.28
VIM-AS1-202ENST00000605833 FGF14Q92915 247 aa23.07■■□□□ 1.28
VIM-AS1-202ENST00000605833 CLSTN3Q9BQT9 956 aa23.07■■□□□ 1.28
VIM-AS1-202ENST00000605833 TMEM60Q9H2L4 133 aa23.07■■□□□ 1.28
VIM-AS1-202ENST00000605833 PDZD7Q9H5P4 517 aa23.07■■□□□ 1.28
VIM-AS1-202ENST00000605833 PRMT7Q9NVM4 692 aaPredicted RBP23.07■■□□□ 1.28
VIM-AS1-202ENST00000605833 SNTG2Q9NY99 539 aa23.07■■□□□ 1.28
VIM-AS1-202ENST00000605833 FANCMQ8IYD8 2048 aa23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 ADAM12O43184 909 aa23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 LRRN2O75325 713 aa23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 RECQL4O94761 1208 aa23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 C1RP00736 705 aa23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 SPATA31C1P0DKV0 1188 aa23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 TMEM132AQ24JP5 1023 aa23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 LIN9Q5TKA1 542 aa23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 CDCA2Q69YH5 1023 aaPredicted RBP23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 DCLRE1AQ6PJP8 1040 aa23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 PARM1Q6UWI2 310 aa23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 DIS3L2Q8IYB7 885 aaKnown RBP23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 BSNDQ8WZ55 320 aa23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 MTMR9Q96QG7 549 aa23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 TTPALQ9BTX7 342 aa23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 DLGAP2Q9P1A6 1054 aa23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 SIT1Q9Y3P8 196 aa23.06■■□□□ 1.28
VIM-AS1-202ENST00000605833 CCL16O15467 120 aa23.05■■□□□ 1.28
VIM-AS1-202ENST00000605833 JAK2O60674 1132 aa23.05■■□□□ 1.28
VIM-AS1-202ENST00000605833 EDN1P05305 212 aa23.05■■□□□ 1.28
VIM-AS1-202ENST00000605833 C8AP07357 584 aa23.05■■□□□ 1.28
VIM-AS1-202ENST00000605833 LIG1P18858 919 aa23.05■■□□□ 1.28
VIM-AS1-202ENST00000605833 ME3Q16798 604 aa23.05■■□□□ 1.28
VIM-AS1-202ENST00000605833 PHLDB3Q6NSJ2 640 aa23.05■■□□□ 1.28
VIM-AS1-202ENST00000605833 NOSTRINQ8IVI9 506 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms