RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 KIAA1586Q9HCI6 787 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 RNF19AQ9NV58 838 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 SNTG2Q9NY99 539 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 CXXC1Q9P0U4 656 aaPredicted RBP13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 GOLGA8IPA6NC78 632 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 GOLGA8JA6NMD2 632 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 CETN3O15182 167 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 MAPK13O15264 365 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 INPPL1O15357 1258 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 EXOC3O60645 756 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 AKAP3O75969 853 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 RECQL4O94761 1208 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 CAVIN2O95810 425 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 AMHP03971 560 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 ITGA4P13612 1032 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 BMP8BP34820 402 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 TNFSF9P41273 254 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 CASP4P49662 377 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 ACOT2P49753 483 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 MCCD1P59942 119 aaPredicted RBP13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 ENOX2Q16206 610 aaKnown RBP13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 SLC10A6Q3KNW5 377 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 SEZ6Q53EL9 994 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 XKR4Q5GH76 650 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 C9orf50Q5SZB4 431 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 SPATA1Q5VX52 437 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 CBWD2Q8IUF1 395 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 HACE1Q8IYU2 909 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 LPPQ93052 612 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 PGBD4Q96DM1 585 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 CEP63Q96MT8 703 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 FAM213AQ9BRX8 229 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 MKNK1Q9BUB5 465 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 CCDC94Q9BW85 323 aaPredicted RBP13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 NAT10Q9H0A0 1025 aaKnown RBP13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 GIT1Q9Y2X7 761 aa13.78□□□□□ -0.2
CHMP2A-206ENST00000600118 TTC26A0AVF1 554 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 SLC16A3O15427 465 aaKnown RBP13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 AKAP5P24588 427 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 ZNF165P49910 485 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 WNT7BP56706 349 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 OSTNP61366 133 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 HSP90AA2PQ14568 343 aaPredicted RBP13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 NCAPHQ15003 741 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 SHHQ15465 462 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 SNRNP35Q16560 246 aaKnown RBP13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 ALKAL1Q6UXT8 129 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 IRF2BP1Q8IU81 584 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 BRSK2Q8IWQ3 736 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 CSGALNACT2Q8N6G5 542 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 PHOSPHO2Q8TCD6 241 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 EEF2KMTQ96G04 330 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 BORCS6Q96GS4 357 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 SNX27Q96L92 541 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 MFSD14AQ96MC6 490 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 ACAP3Q96P50 834 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 MTIF3Q9H2K0 278 aaKnown RBP13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 PRO3102Q9H379 93 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 PLEKHA5Q9HAU0 1116 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 UBN1Q9NPG3 1134 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 PCDHB7Q9Y5E2 793 aa13.77□□□□□ -0.21
CHMP2A-206ENST00000600118 ZNF233A6NK53 670 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 ZBBXA8MT70 800 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 IKBKBO14920 756 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 OFD1O75665 1012 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 CXCL8P10145 99 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 PSMC2P35998 433 aaKnown RBP13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 KCNJ6P48051 423 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 MYL5Q02045 173 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 ENPEPQ07075 957 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 IQCB1Q15051 598 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 CLLU1OSQ5K130 101 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 FILIP1Q7Z7B0 1213 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 DHX40Q8IX18 779 aaKnown RBP13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 RNF169Q8NCN4 708 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 GSTCDQ8NEC7 633 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 SLC9A7Q96T83 725 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 APOL6Q9BWW8 343 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 SRRTQ9BXP5 876 aaKnown RBP13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 UBE2OQ9C0C9 1292 aaKnown RBP13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 CXCL16Q9H2A7 254 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 TSPY26PQ9H489 355 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 RPF1Q9H9Y2 349 aaKnown RBP13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 RSAD1Q9HA92 442 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 RC3H2Q9HBD1 1191 aaKnown RBP13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 TOPORSQ9NS56 1045 aaPredicted RBP13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 RBAKQ9NYW8 714 aaPredicted RBP13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 PARP2Q9UGN5 583 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 SLC4A7Q9Y6M7 1214 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 CEP290O15078 2479 aa13.76□□□□□ -0.21
CHMP2A-206ENST00000600118 TTC3P53804 2025 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 MICAL3Q7RTP6 2002 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 LACTBL1A8MY62 500 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 PTGESO14684 152 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 HOXA2O43364 376 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 DGKIO75912 1065 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 FGFR1OPO95684 399 aaKnown RBP13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 FGFR1P11362 822 aa13.75□□□□□ -0.21
CHMP2A-206ENST00000600118 KCNE1P15382 129 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms