RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 KIAA1841Q6NSI8 718 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 BRAPQ7Z569 592 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 SYT2Q8N9I0 419 aaPredicted RBP14.37□□□□□ -0.11
LIG1-212ENST00000596549 DRC1Q96MC2 740 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 ADPGKQ9BRR6 497 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 GPR62Q9BZJ7 368 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 CDT1Q9H211 546 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 ADAM7Q9H2U9 754 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 MRPL17Q9NRX2 175 aaKnown RBP14.37□□□□□ -0.11
LIG1-212ENST00000596549 DZANK1Q9NVP4 752 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 STK39Q9UEW8 545 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 ADAM28Q9UKQ2 775 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 TNFSF13BQ9Y275 285 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 CCDC169A6NNP5 214 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 SFI1A8K8P3 1242 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 PRR33A8MZF0 331 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 TEX28O15482 410 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 DSG1Q02413 1049 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 CACNB1Q02641 598 aaPredicted RBP14.36□□□□□ -0.11
LIG1-212ENST00000596549 ITIH3Q06033 890 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 RESTQ13127 1097 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 SF3A1Q15459 793 aaKnown RBP14.36□□□□□ -0.11
LIG1-212ENST00000596549 GLRA4Q5JXX5 417 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 KIAA0319Q5VV43 1072 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 CABP7Q86V35 215 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 HASPINQ8TF76 798 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 ACO2Q99798 780 aaKnown RBP14.36□□□□□ -0.11
LIG1-212ENST00000596549 EMILIN2Q9BXX0 1053 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 NT5C3AQ9H0P0 336 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 TMEM134Q9H6X4 195 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 PTPRHQ9HD43 1115 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 KMT5AQ9NQR1 393 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 CHST7Q9NS84 486 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 GDAQ9Y2T3 454 aa14.36□□□□□ -0.11
LIG1-212ENST00000596549 DOCK8Q8NF50 2099 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 TRIOO75962 3097 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 NPHP3-ACAD11A0A0J9YXS1 232 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 K7ERI5 159 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 SLC16A4O15374 487 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 MEFVO15553 781 aaPredicted RBP14.35□□□□□ -0.11
LIG1-212ENST00000596549 PLA2G4BP0C869 781 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 PROZP22891 400 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 HSP90AA2PQ14568 343 aaPredicted RBP14.35□□□□□ -0.11
LIG1-212ENST00000596549 ZNF568Q3ZCX4 644 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 PPFIBP1Q86W92 1011 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 AK8Q96MA6 479 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 FBXL18Q96ME1 805 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 PPP1R10Q96QC0 940 aaKnown RBP14.35□□□□□ -0.11
LIG1-212ENST00000596549 TIPINQ9BVW5 301 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 TARS2Q9BW92 718 aaKnown RBP14.35□□□□□ -0.11
LIG1-212ENST00000596549 COLEC11Q9BWP8 271 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 SFXN1Q9H9B4 322 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 C17orf75Q9HAS0 396 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 RXFP1Q9HBX9 757 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 BLOC1S4Q9NUP1 217 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 ZNF318Q5VUA4 2279 aa14.35□□□□□ -0.11
LIG1-212ENST00000596549 C2CD4DB7Z1M9 353 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 NR1I2O75469 434 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 THP07101 528 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 PLS3P13797 630 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 SYT1P21579 422 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 IGFBP6P24592 240 aaPredicted RBP14.34□□□□□ -0.11
LIG1-212ENST00000596549 KLRC2P26717 231 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 GRM5P41594 1212 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 KARSQ15046 597 aaKnown RBP14.34□□□□□ -0.11
LIG1-212ENST00000596549 PTPAQ15257 358 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 ARSHQ5FYA8 562 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 RTP2Q5QGT7 225 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 CES5AQ6NT32 575 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 FAM173BQ6P4H8 233 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 TMC5Q6UXY8 1006 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 KCTD17Q8N5Z5 321 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 CDK5RAP3Q96JB5 506 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 NECTIN4Q96NY8 510 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 MRPL4Q9BYD3 311 aaKnown RBP14.34□□□□□ -0.11
LIG1-212ENST00000596549 GOLGA2P5Q9HBQ8 144 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 MAN1C1Q9NR34 630 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 CLIC4Q9Y696 253 aa14.34□□□□□ -0.11
LIG1-212ENST00000596549 SF3B1O75533 1304 aaKnown RBP eCLIP14.34□□□□□ -0.114e-6■■■■■ 34.5
LIG1-212ENST00000596549 K7ELQ4 463 aaPredicted RBP14.33□□□□□ -0.12
LIG1-212ENST00000596549 BRD1O95696 1058 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 BMP15O95972 392 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 ADH1AP07327 375 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 MAPTP10636 758 aaKnown RBP14.33□□□□□ -0.12
LIG1-212ENST00000596549 RPL17P18621 184 aaKnown RBP14.33□□□□□ -0.12
LIG1-212ENST00000596549 PLCG1P19174 1290 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 MTHFRP42898 656 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 NCKAP1LP55160 1127 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 SOX4Q06945 474 aaPredicted RBP14.33□□□□□ -0.12
LIG1-212ENST00000596549 PRSS55Q6UWB4 352 aaPredicted RBP14.33□□□□□ -0.12
LIG1-212ENST00000596549 MPZL3Q6UWV2 235 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 GPR149Q86SP6 731 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 TMEM87AQ8NBN3 555 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 C3orf58Q8NDZ4 430 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 TMEM161BQ8NDZ6 487 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 SPIRE2Q8WWL2 714 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 EDAQ92838 391 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 ZBTB45Q96K62 511 aaPredicted RBP14.33□□□□□ -0.12
LIG1-212ENST00000596549 SNX27Q96L92 541 aa14.33□□□□□ -0.12
LIG1-212ENST00000596549 REEP2Q9BRK0 252 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms