RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 HPS3Q969F9 1004 aa16.42■□□□□ 0.22
SCN1B-204ENST00000596348 BICD1Q96G01 975 aa16.42■□□□□ 0.22
SCN1B-204ENST00000596348 PYM1Q9BRP8 204 aaKnown RBP16.42■□□□□ 0.22
SCN1B-204ENST00000596348 LRRC27Q9C0I9 530 aa16.42■□□□□ 0.22
SCN1B-204ENST00000596348 MRPL44Q9H9J2 332 aaKnown RBP16.42■□□□□ 0.22
SCN1B-204ENST00000596348 LMCD1Q9NZU5 365 aa16.42■□□□□ 0.22
SCN1B-204ENST00000596348 CHMP5Q9NZZ3 219 aa16.42■□□□□ 0.22
SCN1B-204ENST00000596348 TISP43B9A030 160 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 NT5C1B-RDH14C9J2C7 533 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 PTGESO14684 152 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 HNRNPDLO14979 420 aaKnown RBP16.41■□□□□ 0.22
SCN1B-204ENST00000596348 MEFVO15553 781 aaPredicted RBP16.41■□□□□ 0.22
SCN1B-204ENST00000596348 CSPG5O95196 566 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 MYBP10242 640 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 HARSP12081 509 aaKnown RBP16.41■□□□□ 0.22
SCN1B-204ENST00000596348 GRM5P41594 1212 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 SYKP43405 635 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 SLC11A1P49279 550 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 OSTNP61366 133 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 MCL1Q07820 350 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 DSC1Q08554 894 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 CUL4BQ13620 913 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 NOLC1Q14978 699 aaKnown RBP eCLIP16.41■□□□□ 0.22
SCN1B-204ENST00000596348 CSPP1Q1MSJ5 1256 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 CCDC65Q8IXS2 484 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 CEP57L1Q8IYX8 460 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 SLC17A8Q8NDX2 589 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 PPM1EQ8WY54 764 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 PAGE5Q96GU1 130 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 TCHPQ9BT92 498 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 TSHZ2Q9NRE2 1034 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 SPG21Q9NZD8 308 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 KANSL3Q9P2N6 904 aa16.41■□□□□ 0.22
SCN1B-204ENST00000596348 SPTBN5Q9NRC6 3674 aaKnown RBP16.4■□□□□ 0.22
SCN1B-204ENST00000596348 ANKRD63C9JTQ0 380 aa16.4■□□□□ 0.22
SCN1B-204ENST00000596348 GALTP07902 379 aa16.4■□□□□ 0.22
SCN1B-204ENST00000596348 PPM1AP35813 382 aa16.4■□□□□ 0.22
SCN1B-204ENST00000596348 ALDH7A1P49419 539 aaKnown RBP16.4■□□□□ 0.22
SCN1B-204ENST00000596348 LIG4P49917 911 aa16.4■□□□□ 0.22
SCN1B-204ENST00000596348 EHHADHQ08426 723 aa16.4■□□□□ 0.22
SCN1B-204ENST00000596348 SEZ6Q53EL9 994 aa16.4■□□□□ 0.22
SCN1B-204ENST00000596348 APBB1IPQ7Z5R6 666 aaPredicted RBP16.4■□□□□ 0.22
SCN1B-204ENST00000596348 COLGALT2Q8IYK4 626 aa16.4■□□□□ 0.22
SCN1B-204ENST00000596348 POF1BQ8WVV4 589 aa16.4■□□□□ 0.22
SCN1B-204ENST00000596348 HVCN1Q96D96 273 aa16.4■□□□□ 0.22
SCN1B-204ENST00000596348 LMAN2LQ9H0V9 348 aa16.4■□□□□ 0.22
SCN1B-204ENST00000596348 USP25Q9UHP3 1055 aa16.4■□□□□ 0.22
SCN1B-204ENST00000596348 PCDHGC5Q9Y5F6 944 aa16.4■□□□□ 0.22
SCN1B-204ENST00000596348 XIRP2A4UGR9 3374 aa16.4■□□□□ 0.22
SCN1B-204ENST00000596348 F8W810 466 aa16.39■□□□□ 0.21
SCN1B-204ENST00000596348 CLDN3O15551 220 aa16.39■□□□□ 0.21
SCN1B-204ENST00000596348 FAM189A1O60320 539 aa16.39■□□□□ 0.21
SCN1B-204ENST00000596348 GCNT3O95395 438 aa16.39■□□□□ 0.21
SCN1B-204ENST00000596348 ABCD1P33897 745 aa16.39■□□□□ 0.21
SCN1B-204ENST00000596348 IRS1P35568 1242 aa16.39■□□□□ 0.21
SCN1B-204ENST00000596348 PLCB3Q01970 1234 aa16.39■□□□□ 0.21
SCN1B-204ENST00000596348 GRIK3Q13003 919 aa16.39■□□□□ 0.21
SCN1B-204ENST00000596348 NAB2Q15742 525 aa16.39■□□□□ 0.21
SCN1B-204ENST00000596348 PTPROQ16827 1216 aa16.39■□□□□ 0.21
SCN1B-204ENST00000596348 ZBTB41Q5SVQ8 909 aa16.39■□□□□ 0.21
SCN1B-204ENST00000596348 L1TD1Q5T7N2 865 aaKnown RBP16.39■□□□□ 0.21
SCN1B-204ENST00000596348 UNC13DQ70J99 1090 aa16.39■□□□□ 0.21
SCN1B-204ENST00000596348 RPS6KC1Q96S38 1066 aa16.39■□□□□ 0.21
SCN1B-204ENST00000596348 CCDC94Q9BW85 323 aaPredicted RBP16.39■□□□□ 0.21
SCN1B-204ENST00000596348 CACNG4Q9UBN1 327 aa16.39■□□□□ 0.21
SCN1B-204ENST00000596348 PDCD11Q14690 1871 aaKnown RBP16.39■□□□□ 0.21
SCN1B-204ENST00000596348 A0A0B4J269 797 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 KLRC4O43908 158 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 PRPF6O94906 941 aaKnown RBP16.38■□□□□ 0.21
SCN1B-204ENST00000596348 PRR29P0C7W0 189 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 ERVFC1P60507 584 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 UBE3AQ05086 875 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 GLRA4Q5JXX5 417 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 FAM26FQ5R3K3 315 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 ALKAL1Q6UXT8 129 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 KRBA2Q6ZNG9 492 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 IGSF21Q96ID5 467 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 SNX27Q96L92 541 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 FAM193BQ96PV7 902 aaPredicted RBP16.38■□□□□ 0.21
SCN1B-204ENST00000596348 TMEM175Q9BSA9 504 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 VN1R3Q9BXE9 311 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 PRDM6Q9NQX0 595 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 MARCH5Q9NX47 278 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 LZTS1Q9Y250 596 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 PRG3Q9Y2Y8 225 aaPredicted RBP16.38■□□□□ 0.21
SCN1B-204ENST00000596348 STYXL1Q9Y6J8 313 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 TTC28Q96AY4 2481 aa16.38■□□□□ 0.21
SCN1B-204ENST00000596348 PVALEFA0A1B0GWK0 134 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 NRP1O14786 923 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 ZNF202O95125 648 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 ADSSP30520 456 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 HOXD13P35453 343 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 TNFSF9P41273 254 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 MATR3P43243 847 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCN1B-204ENST00000596348 ALCAMQ13740 583 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 SLC10A6Q3KNW5 377 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 TIGD5Q53EQ6 642 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 XKR4Q5GH76 650 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 TCEAL5Q5H9L2 206 aa16.37■□□□□ 0.21
SCN1B-204ENST00000596348 EPM2AIP1Q7L775 607 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms