RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 PHLDB3Q6NSJ2 640 aa20.66■□□□□ 0.9
PDE4C-208ENST00000595343 KCNG4Q8TDN1 519 aa20.66■□□□□ 0.9
PDE4C-208ENST00000595343 TNFRSF25Q93038 417 aa20.66■□□□□ 0.9
PDE4C-208ENST00000595343 SEMA4AQ9H3S1 761 aa20.66■□□□□ 0.9
PDE4C-208ENST00000595343 ARHGEF3Q9NR81 526 aa20.66■□□□□ 0.9
PDE4C-208ENST00000595343 ORC3Q9UBD5 711 aaPredicted RBP20.66■□□□□ 0.9
PDE4C-208ENST00000595343 CACNG4Q9UBN1 327 aa20.66■□□□□ 0.9
PDE4C-208ENST00000595343 TPCN1Q9ULQ1 816 aa20.66■□□□□ 0.9
PDE4C-208ENST00000595343 ZMYM2Q9UBW7 1377 aa20.66■□□□□ 0.9
PDE4C-208ENST00000595343 CACNA1AO00555 2505 aa20.65■□□□□ 0.9
PDE4C-208ENST00000595343 CTDNEP1O95476 244 aa20.65■□□□□ 0.9
PDE4C-208ENST00000595343 KRT2P35908 639 aa20.65■□□□□ 0.9
PDE4C-208ENST00000595343 HSP90AA2PQ14568 343 aaPredicted RBP20.65■□□□□ 0.9
PDE4C-208ENST00000595343 SPECC1Q5M775 1068 aa20.65■□□□□ 0.9
PDE4C-208ENST00000595343 RTP2Q5QGT7 225 aa20.65■□□□□ 0.9
PDE4C-208ENST00000595343 PRSS55Q6UWB4 352 aaPredicted RBP20.65■□□□□ 0.9
PDE4C-208ENST00000595343 ST13P5Q8NFI4 369 aaPredicted RBP20.65■□□□□ 0.9
PDE4C-208ENST00000595343 CCDC43Q96MW1 224 aaKnown RBP20.65■□□□□ 0.9
PDE4C-208ENST00000595343 PAAF1Q9BRP4 392 aa20.65■□□□□ 0.9
PDE4C-208ENST00000595343 POLR3FQ9H1D9 316 aaPredicted RBP20.65■□□□□ 0.9
PDE4C-208ENST00000595343 SLC2A4RGQ9NR83 387 aa20.65■□□□□ 0.9
PDE4C-208ENST00000595343 DLGAP2Q9P1A6 1054 aa20.65■□□□□ 0.9
PDE4C-208ENST00000595343 SIT1Q9Y3P8 196 aa20.65■□□□□ 0.9
PDE4C-208ENST00000595343 NUMBLQ9Y6R0 609 aa20.65■□□□□ 0.9
PDE4C-208ENST00000595343 R4GN57 208 aa20.65■□□□□ 0.9
PDE4C-208ENST00000595343 SF3B1O75533 1304 aaKnown RBP eCLIP20.64■□□□□ 0.89
PDE4C-208ENST00000595343 LMNAP02545 664 aaKnown RBP20.64■□□□□ 0.89
PDE4C-208ENST00000595343 DCNP07585 359 aaKnown RBP20.64■□□□□ 0.89
PDE4C-208ENST00000595343 CALCRLQ16602 461 aa20.64■□□□□ 0.89
PDE4C-208ENST00000595343 PIGOQ8TEQ8 1089 aa20.64■□□□□ 0.89
PDE4C-208ENST00000595343 WASF1Q92558 559 aa20.64■□□□□ 0.89
PDE4C-208ENST00000595343 TTC12Q9H892 705 aaPredicted RBP20.64■□□□□ 0.89
PDE4C-208ENST00000595343 FBXW11Q9UKB1 542 aa20.64■□□□□ 0.89
PDE4C-208ENST00000595343 A0A087WWV3 80 aa20.63■□□□□ 0.89
PDE4C-208ENST00000595343 USO1O60763 962 aaKnown RBP20.63■□□□□ 0.89
PDE4C-208ENST00000595343 FSHRP23945 695 aa20.63■□□□□ 0.89
PDE4C-208ENST00000595343 TUSC3Q13454 348 aa20.63■□□□□ 0.89
PDE4C-208ENST00000595343 DCLRE1AQ6PJP8 1040 aa20.63■□□□□ 0.89
PDE4C-208ENST00000595343 PPP4R3CPQ6ZMV5 832 aa20.63■□□□□ 0.89
PDE4C-208ENST00000595343 GRASPQ7Z6J2 395 aaPredicted RBP20.63■□□□□ 0.89
PDE4C-208ENST00000595343 HASPINQ8TF76 798 aa20.63■□□□□ 0.89
PDE4C-208ENST00000595343 CLSTN3Q9BQT9 956 aa20.63■□□□□ 0.89
PDE4C-208ENST00000595343 TTPALQ9BTX7 342 aa20.63■□□□□ 0.89
PDE4C-208ENST00000595343 BRMS1Q9HCU9 246 aa20.63■□□□□ 0.89
PDE4C-208ENST00000595343 ZFP37Q9Y6Q3 630 aaPredicted RBP20.63■□□□□ 0.89
PDE4C-208ENST00000595343 DOCK6Q96HP0 2047 aa20.63■□□□□ 0.89
PDE4C-208ENST00000595343 LRRIQ4A6NIV6 560 aa20.62■□□□□ 0.89
PDE4C-208ENST00000595343 XRCC6P12956 609 aaKnown RBP eCLIP20.62■□□□□ 0.89
PDE4C-208ENST00000595343 FDPSP14324 419 aaKnown RBP20.62■□□□□ 0.89
PDE4C-208ENST00000595343 TXKP42681 527 aa20.62■□□□□ 0.89
PDE4C-208ENST00000595343 MAEAQ7L5Y9 396 aa20.62■□□□□ 0.89
PDE4C-208ENST00000595343 PRIMPOLQ96LW4 560 aa20.62■□□□□ 0.89
PDE4C-208ENST00000595343 RPP25Q9BUL9 199 aaKnown RBP20.62■□□□□ 0.89
PDE4C-208ENST00000595343 GPRC5CQ9NQ84 441 aa20.62■□□□□ 0.89
PDE4C-208ENST00000595343 CDH7Q9ULB5 785 aa20.62■□□□□ 0.89
PDE4C-208ENST00000595343 CASTOR2A6NHX0 329 aa20.61■□□□□ 0.89
PDE4C-208ENST00000595343 NEMFO60524 1076 aa20.61■□□□□ 0.89
PDE4C-208ENST00000595343 KIF4AO95239 1232 aa20.61■□□□□ 0.89
PDE4C-208ENST00000595343 NTHL1P78549 312 aa20.61■□□□□ 0.89
PDE4C-208ENST00000595343 FAM171A1Q5VUB5 890 aa20.61■□□□□ 0.89
PDE4C-208ENST00000595343 PARM1Q6UWI2 310 aa20.61■□□□□ 0.89
PDE4C-208ENST00000595343 CEP57Q86XR8 500 aa20.61■□□□□ 0.89
PDE4C-208ENST00000595343 C1orf210Q8IVY1 113 aa20.61■□□□□ 0.89
PDE4C-208ENST00000595343 LNX1Q8TBB1 728 aaPredicted RBP20.61■□□□□ 0.89
PDE4C-208ENST00000595343 PIK3R5Q8WYR1 880 aa20.61■□□□□ 0.89
PDE4C-208ENST00000595343 FGF14Q92915 247 aa20.61■□□□□ 0.89
PDE4C-208ENST00000595343 FOXQ1Q9C009 403 aa20.61■□□□□ 0.89
PDE4C-208ENST00000595343 FZD8Q9H461 694 aa20.61■□□□□ 0.89
PDE4C-208ENST00000595343 PRMT7Q9NVM4 692 aaPredicted RBP20.61■□□□□ 0.89
PDE4C-208ENST00000595343 TTLL13PA6NNM8 815 aa20.6■□□□□ 0.89
PDE4C-208ENST00000595343 WNT7AO00755 349 aa20.6■□□□□ 0.89
PDE4C-208ENST00000595343 PTGESO14684 152 aa20.6■□□□□ 0.89
PDE4C-208ENST00000595343 HNRNPA1P09651 372 aaKnown RBP eCLIP20.6■□□□□ 0.89
PDE4C-208ENST00000595343 SP9P0CG40 484 aa20.6■□□□□ 0.89
PDE4C-208ENST00000595343 GLULP15104 373 aa20.6■□□□□ 0.89
PDE4C-208ENST00000595343 STARD6P59095 220 aa20.6■□□□□ 0.89
PDE4C-208ENST00000595343 GPC5P78333 572 aa20.6■□□□□ 0.89
PDE4C-208ENST00000595343 PSMD5Q16401 504 aa20.6■□□□□ 0.89
PDE4C-208ENST00000595343 FAM187BQ17R55 369 aa20.6■□□□□ 0.89
PDE4C-208ENST00000595343 LIN9Q5TKA1 542 aa20.6■□□□□ 0.89
PDE4C-208ENST00000595343 CDCA2Q69YH5 1023 aaPredicted RBP20.6■□□□□ 0.89
PDE4C-208ENST00000595343 PJA1Q8NG27 643 aa20.6■□□□□ 0.89
PDE4C-208ENST00000595343 MTMR9Q96QG7 549 aa20.6■□□□□ 0.89
PDE4C-208ENST00000595343 CACNA1IQ9P0X4 2223 aa20.59■□□□□ 0.89
PDE4C-208ENST00000595343 OTOGLQ3ZCN5 2332 aa20.59■□□□□ 0.89
PDE4C-208ENST00000595343 POTEMA6NI47 508 aa20.59■□□□□ 0.89
PDE4C-208ENST00000595343 BTBD18B2RXH4 712 aa20.59■□□□□ 0.89
PDE4C-208ENST00000595343 THP07101 528 aa20.59■□□□□ 0.89
PDE4C-208ENST00000595343 C8AP07357 584 aa20.59■□□□□ 0.89
PDE4C-208ENST00000595343 SPATA31C1P0DKV0 1188 aa20.59■□□□□ 0.89
PDE4C-208ENST00000595343 PPM1LQ5SGD2 360 aa20.59■□□□□ 0.89
PDE4C-208ENST00000595343 ZC3H14Q6PJT7 736 aaKnown RBP20.59■□□□□ 0.89
PDE4C-208ENST00000595343 ZBTB8OSQ8IWT0 167 aa20.59■□□□□ 0.89
PDE4C-208ENST00000595343 MCPH1Q8NEM0 835 aa20.59■□□□□ 0.89
PDE4C-208ENST00000595343 SHDQ96IW2 340 aa20.59■□□□□ 0.89
PDE4C-208ENST00000595343 CXCL16Q9H2A7 254 aa20.59■□□□□ 0.89
PDE4C-208ENST00000595343 PDZD7Q9H5P4 517 aa20.59■□□□□ 0.89
PDE4C-208ENST00000595343 SNTG2Q9NY99 539 aa20.59■□□□□ 0.89
PDE4C-208ENST00000595343 DMXL1Q9Y485 3027 aa20.58■□□□□ 0.89
PDE4C-208ENST00000595343 N4BP3O15049 544 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms