RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 RAD51AP2Q09MP3 1159 aa19.47■□□□□ 0.71
SHKBP1-204ENST00000594862 KARSQ15046 597 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-204ENST00000594862 PTPN14Q15678 1187 aa19.47■□□□□ 0.71
SHKBP1-204ENST00000594862 EEF1DP3Q658K8 133 aa19.47■□□□□ 0.71
SHKBP1-204ENST00000594862 ANKRD54Q6NXT1 300 aa19.47■□□□□ 0.71
SHKBP1-204ENST00000594862 ZPBP2Q6X784 338 aa19.47■□□□□ 0.71
SHKBP1-204ENST00000594862 ACO2Q99798 780 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-204ENST00000594862 POLD4Q9HCU8 107 aa19.47■□□□□ 0.71
SHKBP1-204ENST00000594862 MARCH5Q9NX47 278 aa19.47■□□□□ 0.71
SHKBP1-204ENST00000594862 KLK14Q9P0G3 267 aa19.47■□□□□ 0.71
SHKBP1-204ENST00000594862 HCFC2Q9Y5Z7 792 aa19.47■□□□□ 0.71
SHKBP1-204ENST00000594862 CLASP2O75122 1294 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 TOM1L1O75674 476 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 FAM13AO94988 1023 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 BRD1O95696 1058 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 EDN1P05305 212 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 GRM5P41594 1212 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 GLUD2P49448 558 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 SLC39A14Q15043 492 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 MPZL3Q6UWV2 235 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 KRI1Q8N9T8 703 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 TMEM161BQ8NDZ6 487 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 VN1R2Q8NFZ6 395 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 REEP2Q9BRK0 252 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 TCHPQ9BT92 498 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 VN1R3Q9BXE9 311 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 CDT1Q9H211 546 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 PARVGQ9HBI0 331 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 BLOC1S4Q9NUP1 217 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 MIOSQ9NXC5 875 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 DPP7Q9UHL4 492 aa19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 SF3B1O75533 1304 aaKnown RBP eCLIP19.46■□□□□ 0.71
SHKBP1-204ENST00000594862 SFI1A8K8P3 1242 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 MAPTP10636 758 aaKnown RBP19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 MARCKSP29966 332 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 DDIT3P35638 169 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 NASPP49321 788 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 ZNF131P52739 623 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 NCKAP1LP55160 1127 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 GRIN1Q05586 938 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 ITIH3Q06033 890 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 ELAVL2Q12926 359 aaKnown RBP19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 HSP90AA2PQ14568 343 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 KIAA1841Q6NSI8 718 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 CES5AQ6NT32 575 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 LLGL2Q6P1M3 1020 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 CCDC73Q6ZRK6 1079 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 RNF168Q8IYW5 571 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 UROC1Q96N76 676 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 NECTIN4Q96NY8 510 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 USP28Q96RU2 1077 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 TARS2Q9BW92 718 aaKnown RBP19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 C1QTNF1Q9BXJ1 281 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 PTPRHQ9HD43 1115 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 ADAM28Q9UKQ2 775 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 GDAQ9Y2T3 454 aa19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 USP15Q9Y4E8 981 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-204ENST00000594862 C19orf67A6NJJ6 358 aa19.44■□□□□ 0.7
SHKBP1-204ENST00000594862 PTGESO14684 152 aa19.44■□□□□ 0.7
SHKBP1-204ENST00000594862 EFEMP2O95967 443 aa19.44■□□□□ 0.7
SHKBP1-204ENST00000594862 C1RP00736 705 aa19.44■□□□□ 0.7
SHKBP1-204ENST00000594862 ADH1AP07327 375 aa19.44■□□□□ 0.7
SHKBP1-204ENST00000594862 PROZP22891 400 aa19.44■□□□□ 0.7
SHKBP1-204ENST00000594862 CEBPZQ03701 1054 aaKnown RBP19.44■□□□□ 0.7
SHKBP1-204ENST00000594862 STK38Q15208 465 aa19.44■□□□□ 0.7
SHKBP1-204ENST00000594862 ARSHQ5FYA8 562 aa19.44■□□□□ 0.7
SHKBP1-204ENST00000594862 FUT10Q6P4F1 479 aa19.44■□□□□ 0.7
SHKBP1-204ENST00000594862 FAM173BQ6P4H8 233 aa19.44■□□□□ 0.7
SHKBP1-204ENST00000594862 TAS1R3Q7RTX0 852 aa19.44■□□□□ 0.7
SHKBP1-204ENST00000594862 EPHX3Q9H6B9 360 aa19.44■□□□□ 0.7
SHKBP1-204ENST00000594862 SLC38A7Q9NVC3 462 aa19.44■□□□□ 0.7
SHKBP1-204ENST00000594862 TADA2AO75478 443 aa19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 YEATS4O95619 227 aa19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 DSG1Q02413 1049 aa19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 DHX8Q14562 1220 aaKnown RBP19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 MCM6Q14566 821 aa19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 NOLC1Q14978 699 aaKnown RBP eCLIP19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 KYAT1Q16773 422 aa19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 USP41Q3LFD5 358 aa19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 RRAGBQ5VZM2 374 aa19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 PDXDC1Q6P996 788 aa19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 HAUS6Q7Z4H7 955 aa19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 MYCT1Q8N699 235 aa19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 AUTS2Q8WXX7 1259 aa19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 SUSD6Q92537 303 aa19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 EPSTI1Q96J88 318 aa19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 ACAP3Q96P50 834 aa19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 USP20Q9Y2K6 914 aa19.43■□□□□ 0.7
SHKBP1-204ENST00000594862 K7ENM7 598 aa19.42■□□□□ 0.7
SHKBP1-204ENST00000594862 TRAK2O60296 914 aa19.42■□□□□ 0.7
SHKBP1-204ENST00000594862 PPP6R2O75170 966 aa19.42■□□□□ 0.7
SHKBP1-204ENST00000594862 ALADP13716 330 aa19.42■□□□□ 0.7
SHKBP1-204ENST00000594862 KLRC2P26717 231 aa19.42■□□□□ 0.7
SHKBP1-204ENST00000594862 PLA2G5P39877 138 aa19.42■□□□□ 0.7
SHKBP1-204ENST00000594862 CBX2Q14781 532 aaPredicted RBP19.42■□□□□ 0.7
SHKBP1-204ENST00000594862 ATL3Q6DD88 541 aa19.42■□□□□ 0.7
SHKBP1-204ENST00000594862 SYCE2Q6PIF2 218 aa19.42■□□□□ 0.7
SHKBP1-204ENST00000594862 SLC22A17Q8WUG5 538 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms