RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 BICD1Q96G01 975 aa24■■□□□ 1.43
HOMER3-206ENST00000594439 IGSF21Q96ID5 467 aa24■■□□□ 1.43
HOMER3-206ENST00000594439 RPS6KC1Q96S38 1066 aa24■■□□□ 1.43
HOMER3-206ENST00000594439 C7orf25Q9BPX7 421 aa24■■□□□ 1.43
HOMER3-206ENST00000594439 HAPLN2Q9GZV7 340 aa24■■□□□ 1.43
HOMER3-206ENST00000594439 TLR9Q9NR96 1032 aa24■■□□□ 1.43
HOMER3-206ENST00000594439 OLFML3Q9NRN5 406 aa24■■□□□ 1.43
HOMER3-206ENST00000594439 TBC1D7Q9P0N9 293 aa24■■□□□ 1.43
HOMER3-206ENST00000594439 ANKFY1Q9P2R3 1169 aa24■■□□□ 1.43
HOMER3-206ENST00000594439 SERTAD1Q9UHV2 236 aa24■■□□□ 1.43
HOMER3-206ENST00000594439 CIZ1Q9ULV3 898 aaPredicted RBP24■■□□□ 1.43
HOMER3-206ENST00000594439 CITO14578 2027 aa24■■□□□ 1.43
HOMER3-206ENST00000594439 A0A1W2PQ27 194 aa23.99■■□□□ 1.43
HOMER3-206ENST00000594439 A0A1W2PQ64 194 aa23.99■■□□□ 1.43
HOMER3-206ENST00000594439 A0A1W2PQD8 194 aa23.99■■□□□ 1.43
HOMER3-206ENST00000594439 FSCN2O14926 492 aa23.99■■□□□ 1.43
HOMER3-206ENST00000594439 ACTN4O43707 911 aaKnown RBP23.99■■□□□ 1.43
HOMER3-206ENST00000594439 HARSP12081 509 aaKnown RBP23.99■■□□□ 1.43
HOMER3-206ENST00000594439 ANP32AP39687 249 aaKnown RBP23.99■■□□□ 1.43
HOMER3-206ENST00000594439 LIG4P49917 911 aa23.99■■□□□ 1.43
HOMER3-206ENST00000594439 KRT17Q04695 432 aa23.99■■□□□ 1.43
HOMER3-206ENST00000594439 MCL1Q07820 350 aa23.99■■□□□ 1.43
HOMER3-206ENST00000594439 NOLC1Q14978 699 aaKnown RBP eCLIP23.99■■□□□ 1.43
HOMER3-206ENST00000594439 CCDC65Q8IXS2 484 aa23.99■■□□□ 1.43
HOMER3-206ENST00000594439 TMEM169Q96HH4 297 aa23.99■■□□□ 1.43
HOMER3-206ENST00000594439 CCDC94Q9BW85 323 aaPredicted RBP23.99■■□□□ 1.43
HOMER3-206ENST00000594439 MRPL44Q9H9J2 332 aaKnown RBP23.99■■□□□ 1.43
HOMER3-206ENST00000594439 PUF60Q9UHX1 559 aaKnown RBP23.99■■□□□ 1.43
HOMER3-206ENST00000594439 PCDHGC5Q9Y5F6 944 aa23.99■■□□□ 1.43
HOMER3-206ENST00000594439 EYSQ5T1H1 3165 aa23.99■■□□□ 1.43
HOMER3-206ENST00000594439 NRP1O14786 923 aa23.98■■□□□ 1.43
HOMER3-206ENST00000594439 HNRNPDLO14979 420 aaKnown RBP23.98■■□□□ 1.43
HOMER3-206ENST00000594439 CLDN3O15551 220 aa23.98■■□□□ 1.43
HOMER3-206ENST00000594439 ALDH2P05091 517 aa23.98■■□□□ 1.43
HOMER3-206ENST00000594439 SLFN14P0C7P3 912 aa23.98■■□□□ 1.43
HOMER3-206ENST00000594439 OSTNP61366 133 aa23.98■■□□□ 1.43
HOMER3-206ENST00000594439 COASYQ13057 564 aa23.98■■□□□ 1.43
HOMER3-206ENST00000594439 SKIV2LQ15477 1246 aaKnown RBP23.98■■□□□ 1.43
HOMER3-206ENST00000594439 SLC39A4Q6P5W5 647 aa23.98■■□□□ 1.43
HOMER3-206ENST00000594439 HVCN1Q96D96 273 aa23.98■■□□□ 1.43
HOMER3-206ENST00000594439 FGFBP2Q9BYJ0 223 aa23.98■■□□□ 1.43
HOMER3-206ENST00000594439 FAN1Q9Y2M0 1017 aa23.98■■□□□ 1.43
HOMER3-206ENST00000594439 CASP5P51878 434 aa23.97■■□□□ 1.43
HOMER3-206ENST00000594439 ASIC1P78348 528 aa23.97■■□□□ 1.43
HOMER3-206ENST00000594439 NAB2Q15742 525 aa23.97■■□□□ 1.43
HOMER3-206ENST00000594439 XKR4Q5GH76 650 aa23.97■■□□□ 1.43
HOMER3-206ENST00000594439 MARCH5Q9NX47 278 aa23.97■■□□□ 1.43
HOMER3-206ENST00000594439 BRWD1Q9NSI6 2320 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 ANKRD63C9JTQ0 380 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 MEFVO15553 781 aaPredicted RBP23.96■■□□□ 1.43
HOMER3-206ENST00000594439 THP07101 528 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 MYBP10242 640 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 CASP1P29466 404 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 AFMP43652 599 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 OR1G1P47890 313 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 NDUFA8P51970 172 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 YARSP54577 528 aaKnown RBP23.96■■□□□ 1.43
HOMER3-206ENST00000594439 SEZ6Q53EL9 994 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 PDE12Q6L8Q7 609 aaKnown RBP23.96■■□□□ 1.43
HOMER3-206ENST00000594439 ALKAL1Q6UXT8 129 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 ADGRD2Q7Z7M1 963 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 DDX53Q86TM3 631 aaKnown RBP23.96■■□□□ 1.43
HOMER3-206ENST00000594439 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.96■■□□□ 1.43
HOMER3-206ENST00000594439 GRAMD1CQ8IYS0 662 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 CEP57L1Q8IYX8 460 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 FSIP1Q8NA03 581 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 ACAP3Q96P50 834 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 VN1R3Q9BXE9 311 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 BLZF1Q9H2G9 400 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 IKZF4Q9H2S9 585 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 GOLPH3LQ9H4A5 285 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 USP25Q9UHP3 1055 aa23.96■■□□□ 1.43
HOMER3-206ENST00000594439 PRG3Q9Y2Y8 225 aaPredicted RBP23.96■■□□□ 1.43
HOMER3-206ENST00000594439 PDCD11Q14690 1871 aaKnown RBP23.96■■□□□ 1.43
HOMER3-206ENST00000594439 GCNT3O95395 438 aa23.95■■□□□ 1.42
HOMER3-206ENST00000594439 MATR3P43243 847 aaKnown RBP eCLIP23.95■■□□□ 1.42
HOMER3-206ENST00000594439 SYKP43405 635 aa23.95■■□□□ 1.42
HOMER3-206ENST00000594439 KCNA1Q09470 495 aa23.95■■□□□ 1.42
HOMER3-206ENST00000594439 HYAL1Q12794 435 aa23.95■■□□□ 1.42
HOMER3-206ENST00000594439 TUSC3Q13454 348 aa23.95■■□□□ 1.42
HOMER3-206ENST00000594439 COL19A1Q14993 1142 aa23.95■■□□□ 1.42
HOMER3-206ENST00000594439 TPRNQ4KMQ1 711 aa23.95■■□□□ 1.42
HOMER3-206ENST00000594439 L1TD1Q5T7N2 865 aaKnown RBP23.95■■□□□ 1.42
HOMER3-206ENST00000594439 MICAL1Q8TDZ2 1067 aa23.95■■□□□ 1.42
HOMER3-206ENST00000594439 HPS3Q969F9 1004 aa23.95■■□□□ 1.42
HOMER3-206ENST00000594439 SNX27Q96L92 541 aa23.95■■□□□ 1.42
HOMER3-206ENST00000594439 PPP1R10Q96QC0 940 aaKnown RBP23.95■■□□□ 1.42
HOMER3-206ENST00000594439 TCF25Q9BQ70 676 aa23.95■■□□□ 1.42
HOMER3-206ENST00000594439 TOPORSQ9NS56 1045 aaPredicted RBP23.95■■□□□ 1.42
HOMER3-206ENST00000594439 THEGQ9P2T0 379 aa23.95■■□□□ 1.42
HOMER3-206ENST00000594439 PCDHB13Q9Y5F0 798 aa23.95■■□□□ 1.42
HOMER3-206ENST00000594439 REV3LO60673 3130 aa23.95■■□□□ 1.42
HOMER3-206ENST00000594439 A0A0B4J269 797 aa23.94■■□□□ 1.42
HOMER3-206ENST00000594439 TISP43B9A030 160 aa23.94■■□□□ 1.42
HOMER3-206ENST00000594439 F8W810 466 aa23.94■■□□□ 1.42
HOMER3-206ENST00000594439 FAM189A1O60320 539 aa23.94■■□□□ 1.42
HOMER3-206ENST00000594439 CUL4BQ13620 913 aa23.94■■□□□ 1.42
HOMER3-206ENST00000594439 ALCAMQ13740 583 aa23.94■■□□□ 1.42
HOMER3-206ENST00000594439 GLRA4Q5JXX5 417 aa23.94■■□□□ 1.42
HOMER3-206ENST00000594439 PLPP4Q5VZY2 271 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms