RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 APOBEC2Q9Y235 224 aaKnown RBP13.36□□□□□ -0.27
ZNF558-202ENST00000593891 NOTCH2Q04721 2471 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 SALL3Q9BXA9 1300 aa13.36□□□□□ -0.27
ZNF558-202ENST00000593891 ASCC3Q8N3C0 2202 aaKnown RBP13.35□□□□□ -0.27
ZNF558-202ENST00000593891 ZBTB42B2RXF5 422 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 B4E1Z4 1266 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 SPECC1L-ADORA2AF8WAN1 911 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 CEBPBP17676 345 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 ENGP17813 658 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 SOX9P48436 509 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 PON2Q15165 354 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 SLC5A9Q2M3M2 681 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 TAF1BQ53T94 588 aaPredicted RBP13.35□□□□□ -0.27
ZNF558-202ENST00000593891 ZMYM1Q5SVZ6 1142 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 PMS2CLQ68D20 193 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 EFCAB12Q6NXP0 572 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 IQCA1Q86XH1 822 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 YAF2Q8IY57 180 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 COLGALT2Q8IYK4 626 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 STAG2Q8N3U4 1231 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 SMARCD2Q92925 531 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 ARID3AQ99856 593 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 AVENQ9NQS1 362 aaPredicted RBP13.35□□□□□ -0.27
ZNF558-202ENST00000593891 PIN4Q9Y237 131 aaKnown RBP13.35□□□□□ -0.27
ZNF558-202ENST00000593891 UBIAD1Q9Y5Z9 338 aa13.35□□□□□ -0.27
ZNF558-202ENST00000593891 MYBPHLA2RUH7 354 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 OPHN1O60890 802 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 ATG7O95352 703 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 CCR10P46092 362 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 DHPSP49366 369 aaPredicted RBP13.34□□□□□ -0.27
ZNF558-202ENST00000593891 GPC3P51654 580 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 ALX1Q15699 326 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 MAPK6Q16659 721 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 AXDND1Q5T1B0 1012 aaPredicted RBP13.34□□□□□ -0.27
ZNF558-202ENST00000593891 FUT10Q6P4F1 479 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 TXNDC11Q6PKC3 985 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 RTL10Q7L3V2 364 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 GPR155Q7Z3F1 870 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 MFSD6LQ8IWD5 586 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 PLEKHM2Q8IWE5 1019 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 ASB16Q96NS5 453 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 PIGSQ96S52 555 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 KIF2CQ99661 725 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 GCOM2Q9BZD3 368 aaPredicted RBP13.34□□□□□ -0.27
ZNF558-202ENST00000593891 ZNF302Q9NR11 478 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 CEP131Q9UPN4 1083 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 NFASCO94856 1347 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 CNTNAP2Q9UHC6 1331 aa13.34□□□□□ -0.27
ZNF558-202ENST00000593891 IGKV6D-21A0A0A0MT36 114 aa13.33□□□□□ -0.28
ZNF558-202ENST00000593891 PNMA6FA0A0J9YX94 578 aa13.33□□□□□ -0.28
ZNF558-202ENST00000593891 PALM3A6NDB9 673 aaPredicted RBP13.33□□□□□ -0.28
ZNF558-202ENST00000593891 TRABD2BA6NFA1 517 aa13.33□□□□□ -0.28
ZNF558-202ENST00000593891 ARNTLO00327 626 aa13.33□□□□□ -0.28
ZNF558-202ENST00000593891 SLC28A2O43868 658 aa13.33□□□□□ -0.28
ZNF558-202ENST00000593891 CSDE1O75534 798 aaKnown RBP13.33□□□□□ -0.28
ZNF558-202ENST00000593891 PTPN2P17706 415 aa13.33□□□□□ -0.28
ZNF558-202ENST00000593891 SFPQP23246 707 aaKnown RBP eCLIP13.33□□□□□ -0.28
ZNF558-202ENST00000593891 ITPKBP27987 946 aa13.33□□□□□ -0.28
ZNF558-202ENST00000593891 CTHP32929 405 aa13.33□□□□□ -0.28
ZNF558-202ENST00000593891 AFF1P51825 1210 aaKnown RBP13.33□□□□□ -0.28
ZNF558-202ENST00000593891 USP17L6PQ6QN14 398 aa13.33□□□□□ -0.28
ZNF558-202ENST00000593891 POTEHQ6S545 545 aa13.33□□□□□ -0.28
ZNF558-202ENST00000593891 PRSS55Q6UWB4 352 aaPredicted RBP13.33□□□□□ -0.28
ZNF558-202ENST00000593891 MIER1Q8N108 512 aa13.33□□□□□ -0.28
ZNF558-202ENST00000593891 GPATCH3Q96I76 525 aa13.33□□□□□ -0.28
ZNF558-202ENST00000593891 GPR62Q9BZJ7 368 aa13.33□□□□□ -0.28
ZNF558-202ENST00000593891 RNF41Q9H4P4 317 aaPredicted RBP13.33□□□□□ -0.28
ZNF558-202ENST00000593891 POLMQ9NP87 494 aaPredicted RBP13.33□□□□□ -0.28
ZNF558-202ENST00000593891 PCDHB2Q9Y5E7 798 aa13.33□□□□□ -0.28
ZNF558-202ENST00000593891 ZNF197O14709 1029 aa13.32□□□□□ -0.28
ZNF558-202ENST00000593891 VIPR2P41587 438 aa13.32□□□□□ -0.28
ZNF558-202ENST00000593891 USP39Q53GS9 565 aaKnown RBP13.32□□□□□ -0.28
ZNF558-202ENST00000593891 VPS53Q5VIR6 699 aa13.32□□□□□ -0.28
ZNF558-202ENST00000593891 PKN3Q6P5Z2 889 aa13.32□□□□□ -0.28
ZNF558-202ENST00000593891 TOGARAM2Q6ZUX3 1019 aa13.32□□□□□ -0.28
ZNF558-202ENST00000593891 LRRC71Q8N4P6 559 aa13.32□□□□□ -0.28
ZNF558-202ENST00000593891 SPIRE2Q8WWL2 714 aa13.32□□□□□ -0.28
ZNF558-202ENST00000593891 E2F7Q96AV8 911 aa13.32□□□□□ -0.28
ZNF558-202ENST00000593891 HHIPQ96QV1 700 aa13.32□□□□□ -0.28
ZNF558-202ENST00000593891 CLSTN3Q9BQT9 956 aa13.32□□□□□ -0.28
ZNF558-202ENST00000593891 GTPBP2Q9BX10 602 aaKnown RBP13.32□□□□□ -0.28
ZNF558-202ENST00000593891 KCNH7Q9NS40 1196 aa13.32□□□□□ -0.28
ZNF558-202ENST00000593891 NXF1Q9UBU9 619 aaKnown RBP13.32□□□□□ -0.28
ZNF558-202ENST00000593891 EBF1Q9UH73 591 aa13.32□□□□□ -0.28
ZNF558-202ENST00000593891 MBD1Q9UIS9 605 aaPredicted RBP13.32□□□□□ -0.28
ZNF558-202ENST00000593891 ZMYM2Q9UBW7 1377 aa13.32□□□□□ -0.28
ZNF558-202ENST00000593891 ERVH48-1M5A8F1 160 aa13.31□□□□□ -0.28
ZNF558-202ENST00000593891 PIK3CDO00329 1044 aa13.31□□□□□ -0.28
ZNF558-202ENST00000593891 CHADO15335 359 aa13.31□□□□□ -0.28
ZNF558-202ENST00000593891 MICAL2O94851 1124 aa13.31□□□□□ -0.28
ZNF558-202ENST00000593891 FGAP02671 866 aa13.31□□□□□ -0.28
ZNF558-202ENST00000593891 CDC42EP1Q00587 391 aa13.31□□□□□ -0.28
ZNF558-202ENST00000593891 TRMT1LQ7Z2T5 733 aaKnown RBP13.31□□□□□ -0.28
ZNF558-202ENST00000593891 MRPL10Q7Z7H8 261 aaKnown RBP13.31□□□□□ -0.28
ZNF558-202ENST00000593891 INO80BQ9C086 356 aaPredicted RBP13.31□□□□□ -0.28
ZNF558-202ENST00000593891 UBN1Q9NPG3 1134 aa13.31□□□□□ -0.28
ZNF558-202ENST00000593891 INVSQ9Y283 1065 aa13.31□□□□□ -0.28
ZNF558-202ENST00000593891 MTCL1Q9Y4B5 1905 aaKnown RBP13.31□□□□□ -0.28
ZNF558-202ENST00000593891 DOCK6Q96HP0 2047 aa13.3□□□□□ -0.28
ZNF558-202ENST00000593891 UBR5O95071 2799 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms