RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 NEMFO60524 1076 aa19.37■□□□□ 0.69
RETREG3-212ENST00000593251 TADA2AO75478 443 aa19.37■□□□□ 0.69
RETREG3-212ENST00000593251 RFX1P22670 979 aa19.37■□□□□ 0.69
RETREG3-212ENST00000593251 RTP2Q5QGT7 225 aa19.37■□□□□ 0.69
RETREG3-212ENST00000593251 LILRA6Q6PI73 481 aa19.37■□□□□ 0.69
RETREG3-212ENST00000593251 ADSSL1Q8N142 457 aa19.37■□□□□ 0.69
RETREG3-212ENST00000593251 GPR152Q8TDT2 470 aa19.37■□□□□ 0.69
RETREG3-212ENST00000593251 HDAC7Q8WUI4 952 aa19.37■□□□□ 0.69
RETREG3-212ENST00000593251 NFKBIZQ9BYH8 718 aa19.37■□□□□ 0.69
RETREG3-212ENST00000593251 PRKD2Q9BZL6 878 aa19.37■□□□□ 0.69
RETREG3-212ENST00000593251 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.37■□□□□ 0.69
RETREG3-212ENST00000593251 FNIP2Q9P278 1114 aa19.37■□□□□ 0.69
RETREG3-212ENST00000593251 MIA3Q5JRA6 1907 aa19.37■□□□□ 0.69
RETREG3-212ENST00000593251 CASTOR2A6NHX0 329 aa19.36■□□□□ 0.69
RETREG3-212ENST00000593251 TTLL13PA6NNM8 815 aa19.36■□□□□ 0.69
RETREG3-212ENST00000593251 HSP90AA2PQ14568 343 aaPredicted RBP19.36■□□□□ 0.69
RETREG3-212ENST00000593251 ME3Q16798 604 aa19.36■□□□□ 0.69
RETREG3-212ENST00000593251 CXCL16Q9H2A7 254 aa19.36■□□□□ 0.69
RETREG3-212ENST00000593251 ZDHHC7Q9NXF8 308 aa19.36■□□□□ 0.69
RETREG3-212ENST00000593251 PAPLNO95428 1278 aa19.35■□□□□ 0.69
RETREG3-212ENST00000593251 SRFP11831 508 aa19.35■□□□□ 0.69
RETREG3-212ENST00000593251 LAMP2P13473 410 aa19.35■□□□□ 0.69
RETREG3-212ENST00000593251 ATP2B1P20020 1258 aa19.35■□□□□ 0.69
RETREG3-212ENST00000593251 SPECC1Q5M775 1068 aa19.35■□□□□ 0.69
RETREG3-212ENST00000593251 DIS3L2Q8IYB7 885 aaKnown RBP19.35■□□□□ 0.69
RETREG3-212ENST00000593251 GTF3C6Q969F1 213 aa19.35■□□□□ 0.69
RETREG3-212ENST00000593251 MTMR9Q96QG7 549 aa19.35■□□□□ 0.69
RETREG3-212ENST00000593251 TMEM60Q9H2L4 133 aa19.35■□□□□ 0.69
RETREG3-212ENST00000593251 TBC1D17Q9HA65 648 aa19.35■□□□□ 0.69
RETREG3-212ENST00000593251 USP20Q9Y2K6 914 aa19.35■□□□□ 0.69
RETREG3-212ENST00000593251 COL4A3Q01955 1670 aa19.35■□□□□ 0.69
RETREG3-212ENST00000593251 SF3B1O75533 1304 aaKnown RBP eCLIP19.34■□□□□ 0.69
RETREG3-212ENST00000593251 DCHS1Q96JQ0 3298 aa19.34■□□□□ 0.69
RETREG3-212ENST00000593251 JAK2O60674 1132 aa19.34■□□□□ 0.69
RETREG3-212ENST00000593251 ZMYND10O75800 440 aa19.34■□□□□ 0.69
RETREG3-212ENST00000593251 KIF4AO95239 1232 aa19.34■□□□□ 0.69
RETREG3-212ENST00000593251 SPATA31C1P0DKV0 1188 aa19.34■□□□□ 0.69
RETREG3-212ENST00000593251 TUSC3Q13454 348 aa19.34■□□□□ 0.69
RETREG3-212ENST00000593251 HTR4Q13639 388 aa19.34■□□□□ 0.69
RETREG3-212ENST00000593251 ANKRD1Q15327 319 aa19.34■□□□□ 0.69
RETREG3-212ENST00000593251 CEP57Q86XR8 500 aa19.34■□□□□ 0.69
RETREG3-212ENST00000593251 NSUN7Q8NE18 718 aaKnown RBP19.34■□□□□ 0.69
RETREG3-212ENST00000593251 PRMT7Q9NVM4 692 aaPredicted RBP19.34■□□□□ 0.69
RETREG3-212ENST00000593251 SNTG2Q9NY99 539 aa19.34■□□□□ 0.69
RETREG3-212ENST00000593251 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.34■□□□□ 0.69
RETREG3-212ENST00000593251 NUMBLQ9Y6R0 609 aa19.34■□□□□ 0.69
RETREG3-212ENST00000593251 FANCMQ8IYD8 2048 aa19.34■□□□□ 0.69
RETREG3-212ENST00000593251 NOTCH4Q99466 2003 aa19.34■□□□□ 0.69
RETREG3-212ENST00000593251 ZMYM2Q9UBW7 1377 aa19.33■□□□□ 0.69
RETREG3-212ENST00000593251 PTGESO14684 152 aa19.33■□□□□ 0.68
RETREG3-212ENST00000593251 MED24O75448 989 aa19.33■□□□□ 0.68
RETREG3-212ENST00000593251 DCNP07585 359 aaKnown RBP19.33■□□□□ 0.68
RETREG3-212ENST00000593251 LIG1P18858 919 aa19.33■□□□□ 0.68
RETREG3-212ENST00000593251 NTHL1P78549 312 aa19.33■□□□□ 0.68
RETREG3-212ENST00000593251 CREMQ03060 361 aa19.33■□□□□ 0.68
RETREG3-212ENST00000593251 TMEM132AQ24JP5 1023 aa19.33■□□□□ 0.68
RETREG3-212ENST00000593251 FAM171A1Q5VUB5 890 aa19.33■□□□□ 0.68
RETREG3-212ENST00000593251 PPP4R3CPQ6ZMV5 832 aa19.33■□□□□ 0.68
RETREG3-212ENST00000593251 GRASPQ7Z6J2 395 aaPredicted RBP19.33■□□□□ 0.68
RETREG3-212ENST00000593251 ZBTB8OSQ8IWT0 167 aa19.33■□□□□ 0.68
RETREG3-212ENST00000593251 GPR65Q8IYL9 337 aa19.33■□□□□ 0.68
RETREG3-212ENST00000593251 BSNDQ8WZ55 320 aa19.33■□□□□ 0.68
RETREG3-212ENST00000593251 NXPE3Q969Y0 559 aa19.33■□□□□ 0.68
RETREG3-212ENST00000593251 CLSTN3Q9BQT9 956 aa19.33■□□□□ 0.68
RETREG3-212ENST00000593251 RPP25Q9BUL9 199 aaKnown RBP19.33■□□□□ 0.68
RETREG3-212ENST00000593251 PDZD7Q9H5P4 517 aa19.33■□□□□ 0.68
RETREG3-212ENST00000593251 FBXW11Q9UKB1 542 aa19.33■□□□□ 0.68
RETREG3-212ENST00000593251 ANHXE9PGG2 379 aa19.32■□□□□ 0.68
RETREG3-212ENST00000593251 C1RP00736 705 aa19.32■□□□□ 0.68
RETREG3-212ENST00000593251 EDN1P05305 212 aa19.32■□□□□ 0.68
RETREG3-212ENST00000593251 XRCC6P12956 609 aaKnown RBP eCLIP19.32■□□□□ 0.68
RETREG3-212ENST00000593251 FSHRP23945 695 aa19.32■□□□□ 0.68
RETREG3-212ENST00000593251 MCM7P33993 719 aa19.32■□□□□ 0.68
RETREG3-212ENST00000593251 PSMD5Q16401 504 aa19.32■□□□□ 0.68
RETREG3-212ENST00000593251 CDCA2Q69YH5 1023 aaPredicted RBP19.32■□□□□ 0.68
RETREG3-212ENST00000593251 CATSPER3Q86XQ3 398 aa19.32■□□□□ 0.68
RETREG3-212ENST00000593251 NOSTRINQ8IVI9 506 aa19.32■□□□□ 0.68
RETREG3-212ENST00000593251 PRIMPOLQ96LW4 560 aa19.32■□□□□ 0.68
RETREG3-212ENST00000593251 TTPALQ9BTX7 342 aa19.32■□□□□ 0.68
RETREG3-212ENST00000593251 FZD8Q9H461 694 aa19.32■□□□□ 0.68
RETREG3-212ENST00000593251 ARHGEF3Q9NR81 526 aa19.32■□□□□ 0.68
RETREG3-212ENST00000593251 R4GN57 208 aa19.32■□□□□ 0.68
RETREG3-212ENST00000593251 N4BP3O15049 544 aa19.31■□□□□ 0.68
RETREG3-212ENST00000593251 CCL16O15467 120 aa19.31■□□□□ 0.68
RETREG3-212ENST00000593251 ADAM12O43184 909 aa19.31■□□□□ 0.68
RETREG3-212ENST00000593251 RECQL4O94761 1208 aa19.31■□□□□ 0.68
RETREG3-212ENST00000593251 GUCY1B3Q02153 619 aa19.31■□□□□ 0.68
RETREG3-212ENST00000593251 PRPF4BQ13523 1007 aaKnown RBP19.31■□□□□ 0.68
RETREG3-212ENST00000593251 TRIM29Q14134 588 aa19.31■□□□□ 0.68
RETREG3-212ENST00000593251 MCPH1Q8NEM0 835 aa19.31■□□□□ 0.68
RETREG3-212ENST00000593251 LNX1Q8TBB1 728 aaPredicted RBP19.31■□□□□ 0.68
RETREG3-212ENST00000593251 KCNG4Q8TDN1 519 aa19.31■□□□□ 0.68
RETREG3-212ENST00000593251 PIK3R5Q8WYR1 880 aa19.31■□□□□ 0.68
RETREG3-212ENST00000593251 FGF14Q92915 247 aa19.31■□□□□ 0.68
RETREG3-212ENST00000593251 POLD4Q9HCU8 107 aa19.31■□□□□ 0.68
RETREG3-212ENST00000593251 TUFT1Q9NNX1 390 aa19.31■□□□□ 0.68
RETREG3-212ENST00000593251 FRYLO94915 3013 aa19.3■□□□□ 0.68
RETREG3-212ENST00000593251 GVINP1Q7Z2Y8 2422 aa19.3■□□□□ 0.68
RETREG3-212ENST00000593251 ZNF292O60281 2723 aa19.3■□□□□ 0.68
RETREG3-212ENST00000593251 PRKCBP05771 671 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms