RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 CRHR2Q13324 411 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 TTF1Q15361 905 aaPredicted RBP6.4□□□□□ -1.38
SMAD4-216ENST00000593223 UAP1L1Q3KQV9 507 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 PRAMEF14Q5SWL7 426 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 Q6ZSN1 163 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 Q6ZVL8 140 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 MIGA2Q7L4E1 593 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 MIER2Q8N344 545 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 LILRA3Q8N6C8 439 aaPredicted RBP6.4□□□□□ -1.38
SMAD4-216ENST00000593223 REPS2Q8NFH8 660 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 FBXO18Q8NFZ0 1043 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 ST8SIA2Q92186 375 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 EDAQ92838 391 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 SENP6Q9GZR1 1112 aaPredicted RBP6.4□□□□□ -1.38
SMAD4-216ENST00000593223 LANCL2Q9NS86 450 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 JAG2Q9Y219 1238 aa6.4□□□□□ -1.38
SMAD4-216ENST00000593223 ZMYM3Q14202 1370 aa6.4□□□□□ -1.39
SMAD4-216ENST00000593223 CFTRP13569 1480 aa6.4□□□□□ -1.39
SMAD4-216ENST00000593223 DIP2BQ9P265 1576 aa6.4□□□□□ -1.39
SMAD4-216ENST00000593223 PRRG2O14669 202 aa6.39□□□□□ -1.39
SMAD4-216ENST00000593223 S100BP04271 92 aaPredicted RBP6.39□□□□□ -1.39
SMAD4-216ENST00000593223 ODR4Q5SWX8 454 aa6.39□□□□□ -1.39
SMAD4-216ENST00000593223 MAMDC4Q6UXC1 1216 aa6.39□□□□□ -1.39
SMAD4-216ENST00000593223 APBB1IPQ7Z5R6 666 aaPredicted RBP6.39□□□□□ -1.39
SMAD4-216ENST00000593223 FAM83AQ86UY5 434 aa6.39□□□□□ -1.39
SMAD4-216ENST00000593223 RHOT1Q8IXI2 618 aa6.39□□□□□ -1.39
SMAD4-216ENST00000593223 TRMT2AQ8IZ69 625 aaKnown RBP6.39□□□□□ -1.39
SMAD4-216ENST00000593223 CCHCR1Q8TD31 782 aa6.39□□□□□ -1.39
SMAD4-216ENST00000593223 ATXN2LQ8WWM7 1075 aaKnown RBP6.39□□□□□ -1.39
SMAD4-216ENST00000593223 HOOK2Q96ED9 719 aa6.39□□□□□ -1.39
SMAD4-216ENST00000593223 GPR20Q99678 358 aa6.39□□□□□ -1.39
SMAD4-216ENST00000593223 LDAHQ9H6V9 325 aa6.39□□□□□ -1.39
SMAD4-216ENST00000593223 HECAQ9UBI9 543 aaPredicted RBP6.39□□□□□ -1.39
SMAD4-216ENST00000593223 IP6K2Q9UHH9 426 aa6.39□□□□□ -1.39
SMAD4-216ENST00000593223 IL33O95760 270 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 HK1P19367 917 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 SREBF1P36956 1147 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 SEPT2Q15019 361 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 PLEKHG6Q3KR16 790 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 XYLT1Q86Y38 959 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 FAM9AQ8IZU1 332 aaPredicted RBP6.38□□□□□ -1.39
SMAD4-216ENST00000593223 OR2I1PQ8NGU4 316 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMAD4-216ENST00000593223 STON2Q8WXE9 905 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 HDAC10Q969S8 669 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 BORCS6Q96GS4 357 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 PDCD2LQ9BRP1 358 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 CSRNP2Q9H175 543 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 MANSC1Q9H8J5 431 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 TMEM140Q9NV12 185 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 BCCIPQ9P287 314 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMAD4-216ENST00000593223 GIT1Q9Y2X7 761 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 NCANO14594 1321 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 SNAPC4Q5SXM2 1469 aa6.38□□□□□ -1.39
SMAD4-216ENST00000593223 MROH2BQ7Z745 1585 aa6.37□□□□□ -1.39
SMAD4-216ENST00000593223 PRR5-ARHGAP8B1AHC4 643 aa6.37□□□□□ -1.39
SMAD4-216ENST00000593223 IL2RBP14784 551 aa6.37□□□□□ -1.39
SMAD4-216ENST00000593223 HSPA2P54652 639 aa6.37□□□□□ -1.39
SMAD4-216ENST00000593223 ADKP55263 362 aaKnown RBP6.37□□□□□ -1.39
SMAD4-216ENST00000593223 PTH1RQ03431 593 aa6.37□□□□□ -1.39
SMAD4-216ENST00000593223 CNGB1Q14028 1251 aaPredicted RBP6.37□□□□□ -1.39
SMAD4-216ENST00000593223 SPTY2D1Q68D10 685 aaPredicted RBP6.37□□□□□ -1.39
SMAD4-216ENST00000593223 MDGA1Q8NFP4 955 aa6.37□□□□□ -1.39
SMAD4-216ENST00000593223 COA7Q96BR5 231 aa6.37□□□□□ -1.39
SMAD4-216ENST00000593223 PGBD4Q96DM1 585 aa6.37□□□□□ -1.39
SMAD4-216ENST00000593223 CEP95Q96GE4 821 aa6.37□□□□□ -1.39
SMAD4-216ENST00000593223 GPR87Q9BY21 358 aa6.37□□□□□ -1.39
SMAD4-216ENST00000593223 SPON1Q9HCB6 807 aa6.37□□□□□ -1.39
SMAD4-216ENST00000593223 MOCS1Q9NZB8 636 aa6.37□□□□□ -1.39
SMAD4-216ENST00000593223 AJAP1Q9UKB5 411 aaPredicted RBP6.37□□□□□ -1.39
SMAD4-216ENST00000593223 PCDHA13Q9Y5I0 950 aa6.37□□□□□ -1.39
SMAD4-216ENST00000593223 TDRD9Q8NDG6 1382 aaKnown RBP6.36□□□□□ -1.39
SMAD4-216ENST00000593223 CCDC154A6NI56 674 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 B5MCH6 92 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 ADRB1P08588 477 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 RAP2AP10114 183 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 BUD31P41223 144 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-216ENST00000593223 WASP42768 502 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 MAN2A2P49641 1150 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 FLT3LGP49771 235 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 FAM47AQ5JRC9 791 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 MFSD14BQ5SR56 506 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 RSPH3Q86UC2 560 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 CPA6Q8N4T0 437 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 HOXB13Q92826 284 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-216ENST00000593223 HSPBAP1Q96EW2 488 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 CYFIP2Q96F07 1278 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 C1QTNF3Q9BXJ4 246 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 TDP1Q9NUW8 608 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 LIMCH1Q9UPQ0 1083 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 CLCA2Q9UQC9 943 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 TSC22D4Q9Y3Q8 395 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 TOP2BQ02880 1626 aa6.36□□□□□ -1.39
SMAD4-216ENST00000593223 TARBP1Q13395 1621 aaKnown RBP6.36□□□□□ -1.39
SMAD4-216ENST00000593223 TOPBP1Q92547 1522 aa6.35□□□□□ -1.39
SMAD4-216ENST00000593223 GOLGA6L6A8MZA4 724 aa6.35□□□□□ -1.39
SMAD4-216ENST00000593223 HTRA2O43464 458 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-216ENST00000593223 GPR32O75388 356 aa6.35□□□□□ -1.39
SMAD4-216ENST00000593223 EPHB1P54762 984 aa6.35□□□□□ -1.39
SMAD4-216ENST00000593223 MCL1Q07820 350 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms