RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, human

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VMP1-216	ENST00000592790	WWP1	Q9H0M0	922 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	CCDC134	Q9H6E4	229 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	MRPL40	Q9NQ50	206 aa	Known RBP	3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	BLOC1S4	Q9NUP1	217 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	NDE1	Q9NXR1	346 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	FAM153A	Q9UHL3	310 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	ADAMTS7	Q9UKP4	1686 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	SYNPO2	Q9UMS6	1093 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	TFR2	Q9UP52	801 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	UST	Q9Y2C2	406 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	ZBTB12	Q9Y330	459 aa	Predicted RBP	3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	PKD1L3	Q7Z443	1732 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	CNTNAP4	Q9C0A0	1308 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	FRMD3	A2A2Y4	597 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	MAGEA13P	A6NCF6	341 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	CCDC160	A6NGH7	325 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	MCF2L	O15068	1137 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	RIPK2	O43353	540 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	SPAG7	O75391	227 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	KRT38	O76015	456 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	KRT1	P04264	644 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	P4HB	P07237	508 aa	Known RBP	3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	KRT7	P08729	469 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	ABHD2	P08910	425 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	LIG4	P49917	911 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	ARFIP2	P53365	341 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	POLG	P54098	1239 aa	Predicted RBP	3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	HADHB	P55084	474 aa	Known RBP	3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	RASA3	Q14644	834 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	POTEG	Q6S5H5	508 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	MIGA2	Q7L4E1	593 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	CRLF3	Q8IUI8	442 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	RDH13	Q8NBN7	331 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	MCPH1	Q8NEM0	835 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	PIGO	Q8TEQ8	1089 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	SCFD1	Q8WVM8	642 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	LZIC	Q8WZA0	190 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	POMGNT1	Q8WZA1	660 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	DDX17	Q92841	729 aa	Known RBP	3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	THOC1	Q96FV9	657 aa	Known RBP	3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	FGD4	Q96M96	766 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	PNMA5	Q96PV4	448 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	MED15	Q96RN5	788 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	GCOM2	Q9BZD3	368 aa	Predicted RBP	3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	FAM192A	Q9GZU8	254 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	GAN	Q9H2C0	597 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	MMADHC	Q9H3L0	296 aa	Predicted RBP	3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	TRABD	Q9H4I3	376 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	CD209	Q9NNX6	404 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	SAYSD1	Q9NPB0	183 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	SMARCAL1	Q9NZC9	954 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	ZFAT	Q9P243	1243 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	JAG2	Q9Y219	1238 aa		3.76	□□□□□ -1.81
VMP1-216	ENST00000592790	AFF2	P51816	1311 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790		A0A0U1RQJ8	604 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790		A8MXQ7	604 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790		F8W031	263 aa	Predicted RBP	3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	SGK1	O00141	431 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	TM9SF1	O15321	606 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	MGRN1	O60291	552 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	SNX3	O60493	162 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	SORBS3	O60504	671 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	ZBED4	O75132	1171 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	TTC4	O95801	387 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	TSHR	P16473	764 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	ATF7	P17544	494 aa	Predicted RBP	3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	FGFR4	P22455	802 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	SCNN1A	P37088	669 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	PIK3CA	P42336	1068 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	GTF2I	P78347	998 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	CACNB1	Q02641	598 aa	Predicted RBP	3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	TFDP2	Q14188	446 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	IL17A	Q16552	155 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	QRICH1	Q2TAL8	776 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	MAP7D1	Q3KQU3	841 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	GNPTAB	Q3T906	1256 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	ANKRD20A4	Q4UJ75	823 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	BRDT	Q58F21	947 aa	Predicted RBP	3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	ANKRD20A2	Q5SQ80	823 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	ANKRD20A1	Q5TYW2	823 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	DUPD1	Q68J44	220 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	CYP4F22	Q6NT55	531 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	DNAJC24	Q6P3W2	148 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	DDX42	Q86XP3	938 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	WDR75	Q8IWA0	830 aa	Known RBP	3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	FBXL13	Q8NEE6	735 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	CELF1	Q92879	486 aa	Known RBP	3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	NAF1	Q96HR8	494 aa	Known RBP	3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	RANBP17	Q9H2T7	1088 aa	Known RBP	3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	C17orf75	Q9HAS0	396 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	KMT5A	Q9NQR1	393 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	CYP26B1	Q9NR63	512 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	TMOD4	Q9NZQ9	345 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	CORO1C	Q9ULV4	474 aa	Predicted RBP	3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	STARD13	Q9Y3M8	1113 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	KCP	Q6ZWJ8	1503 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	EMSY	Q7Z589	1322 aa		3.75	□□□□□ -1.81
VMP1-216	ENST00000592790	CYP3A7-CYP3A51P	A0A087WV96	503 aa		3.75	□□□□□ -1.81

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