RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 ZBTB33Q86T24 672 aa16.69■□□□□ 0.26
ERCC1-213ENST00000592023 CEP120Q8N960 986 aa16.69■□□□□ 0.26
ERCC1-213ENST00000592023 HASPINQ8TF76 798 aa16.69■□□□□ 0.26
ERCC1-213ENST00000592023 RAD54LQ92698 747 aa16.69■□□□□ 0.26
ERCC1-213ENST00000592023 USP28Q96RU2 1077 aa16.69■□□□□ 0.26
ERCC1-213ENST00000592023 ACO2Q99798 780 aaKnown RBP16.69■□□□□ 0.26
ERCC1-213ENST00000592023 REEP2Q9BRK0 252 aa16.69■□□□□ 0.26
ERCC1-213ENST00000592023 PAAF1Q9BRP4 392 aa16.69■□□□□ 0.26
ERCC1-213ENST00000592023 COLEC11Q9BWP8 271 aa16.69■□□□□ 0.26
ERCC1-213ENST00000592023 EPHX3Q9H6B9 360 aa16.69■□□□□ 0.26
ERCC1-213ENST00000592023 MRPL17Q9NRX2 175 aaKnown RBP16.69■□□□□ 0.26
ERCC1-213ENST00000592023 CDH22Q9UJ99 828 aa16.69■□□□□ 0.26
ERCC1-213ENST00000592023 RBM19Q9Y4C8 960 aaKnown RBP16.69■□□□□ 0.26
ERCC1-213ENST00000592023 MUC3AQ02505 3323 aa16.69■□□□□ 0.26
ERCC1-213ENST00000592023 C19orf67A6NJJ6 358 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 KRT18P05783 430 aaKnown RBP16.68■□□□□ 0.26
ERCC1-213ENST00000592023 HSP90AA1P07900 732 aaKnown RBP16.68■□□□□ 0.26
ERCC1-213ENST00000592023 GLUD2P49448 558 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 SMTNP53814 917 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 OSTNP61366 133 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 STRN3Q13033 797 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 TUSC3Q13454 348 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 ARSHQ5FYA8 562 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 FUT10Q6P4F1 479 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 USP49Q70CQ1 688 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 TAS1R1Q7RTX1 841 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 RNF168Q8IYW5 571 aaPredicted RBP16.68■□□□□ 0.26
ERCC1-213ENST00000592023 TMEM161BQ8NDZ6 487 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 SPIRE2Q8WWL2 714 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 LARP4BQ92615 738 aaKnown RBP16.68■□□□□ 0.26
ERCC1-213ENST00000592023 EPSTI1Q96J88 318 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 B3GALT6Q96L58 329 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 EMILIN2Q9BXX0 1053 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 ANKFY1Q9P2R3 1169 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 ODF2LQ9ULJ1 636 aa16.68■□□□□ 0.26
ERCC1-213ENST00000592023 FAM13AO94988 1023 aa16.67■□□□□ 0.26
ERCC1-213ENST00000592023 THP07101 528 aa16.67■□□□□ 0.26
ERCC1-213ENST00000592023 CNPP09543 421 aaKnown RBP16.67■□□□□ 0.26
ERCC1-213ENST00000592023 MAPTP10636 758 aaKnown RBP16.67■□□□□ 0.26
ERCC1-213ENST00000592023 HOXB8P17481 243 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-213ENST00000592023 KLRC2P26717 231 aa16.67■□□□□ 0.26
ERCC1-213ENST00000592023 GRM5P41594 1212 aa16.67■□□□□ 0.26
ERCC1-213ENST00000592023 HSP90AA2PQ14568 343 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-213ENST00000592023 CBX2Q14781 532 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-213ENST00000592023 TPRNQ4KMQ1 711 aa16.67■□□□□ 0.26
ERCC1-213ENST00000592023 KIAA1841Q6NSI8 718 aa16.67■□□□□ 0.26
ERCC1-213ENST00000592023 SUSD6Q92537 303 aa16.67■□□□□ 0.26
ERCC1-213ENST00000592023 CLIC6Q96NY7 704 aa16.67■□□□□ 0.26
ERCC1-213ENST00000592023 KLHL5Q96PQ7 755 aa16.67■□□□□ 0.26
ERCC1-213ENST00000592023 TCHPQ9BT92 498 aa16.67■□□□□ 0.26
ERCC1-213ENST00000592023 CCDC94Q9BW85 323 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-213ENST00000592023 CCSER1Q9C0I3 900 aa16.67■□□□□ 0.26
ERCC1-213ENST00000592023 S1PR5Q9H228 398 aa16.67■□□□□ 0.26
ERCC1-213ENST00000592023 ZSCAN16Q9H4T2 348 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-213ENST00000592023 DZANK1Q9NVP4 752 aa16.67■□□□□ 0.26
ERCC1-213ENST00000592023 LARSQ9P2J5 1176 aaKnown RBP16.67■□□□□ 0.26
ERCC1-213ENST00000592023 ADAM28Q9UKQ2 775 aa16.67■□□□□ 0.26
ERCC1-213ENST00000592023 PLXNA3P51805 1871 aa16.67■□□□□ 0.26
ERCC1-213ENST00000592023 SPDYE4A6NLX3 237 aa16.66■□□□□ 0.26
ERCC1-213ENST00000592023 K7ENM7 598 aa16.66■□□□□ 0.26
ERCC1-213ENST00000592023 ABLIM1O14639 778 aa16.66■□□□□ 0.26
ERCC1-213ENST00000592023 TBCAO75347 108 aaKnown RBP16.66■□□□□ 0.26
ERCC1-213ENST00000592023 KIF4AO95239 1232 aa16.66■□□□□ 0.26
ERCC1-213ENST00000592023 EFEMP2O95967 443 aa16.66■□□□□ 0.26
ERCC1-213ENST00000592023 TXLNAP40222 546 aa16.66■□□□□ 0.26
ERCC1-213ENST00000592023 YARSP54577 528 aaKnown RBP16.66■□□□□ 0.26
ERCC1-213ENST00000592023 NCKAP1LP55160 1127 aa16.66■□□□□ 0.26
ERCC1-213ENST00000592023 NAB2Q15742 525 aa16.66■□□□□ 0.26
ERCC1-213ENST00000592023 RARS2Q5T160 578 aaKnown RBP16.66■□□□□ 0.26
ERCC1-213ENST00000592023 FOXD4L5Q5VV16 416 aaPredicted RBP16.66■□□□□ 0.26
ERCC1-213ENST00000592023 MPZL3Q6UWV2 235 aa16.66■□□□□ 0.26
ERCC1-213ENST00000592023 PPFIBP1Q86W92 1011 aa16.66■□□□□ 0.26
ERCC1-213ENST00000592023 C12orf76Q8N812 135 aaPredicted RBP16.66■□□□□ 0.26
ERCC1-213ENST00000592023 SLC22A17Q8WUG5 538 aa16.66■□□□□ 0.26
ERCC1-213ENST00000592023 FOXD4L4Q8WXT5 416 aaPredicted RBP16.66■□□□□ 0.26
ERCC1-213ENST00000592023 NTPCRQ9BSD7 190 aaKnown RBP16.66■□□□□ 0.26
ERCC1-213ENST00000592023 PHF7Q9BWX1 381 aaPredicted RBP16.66■□□□□ 0.26
ERCC1-213ENST00000592023 C1QTNF1Q9BXJ1 281 aa16.66■□□□□ 0.26
ERCC1-213ENST00000592023 GPR62Q9BZJ7 368 aa16.66■□□□□ 0.26
ERCC1-213ENST00000592023 ZHX3Q9H4I2 956 aa16.66■□□□□ 0.26
ERCC1-213ENST00000592023 PTPRHQ9HD43 1115 aa16.66■□□□□ 0.26
ERCC1-213ENST00000592023 SRPRBQ9Y5M8 271 aaKnown RBP16.66■□□□□ 0.26
ERCC1-213ENST00000592023 SF3B1O75533 1304 aaKnown RBP eCLIP16.66■□□□□ 0.26
ERCC1-213ENST00000592023 NCOR1O75376 2440 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 LILRB3O75022 631 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 TADA2AO75478 443 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 WEE2P0C1S8 567 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 MCF2P10911 925 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 PROZP22891 400 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 SP100P23497 879 aaPredicted RBP16.65■□□□□ 0.26
ERCC1-213ENST00000592023 CLCN4P51793 760 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 DSG1Q02413 1049 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 NOLC1Q14978 699 aaKnown RBP eCLIP16.65■□□□□ 0.26
ERCC1-213ENST00000592023 KANK3Q6NY19 840 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 HAUS6Q7Z4H7 955 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 MYCT1Q8N699 235 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 BICD1Q96G01 975 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 ZBTB45Q96K62 511 aaPredicted RBP16.65■□□□□ 0.26
ERCC1-213ENST00000592023 RPGRIP1Q96KN7 1286 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 PARVGQ9HBI0 331 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms