RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 MBTD1Q05BQ5 628 aa17.69■□□□□ 0.42
DDX39A-216ENST00000591275 CAPSQ13938 189 aa17.69■□□□□ 0.42
DDX39A-216ENST00000591275 MXD4Q14582 209 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-216ENST00000591275 PCBP1Q15365 356 aaKnown RBP eCLIP17.69■□□□□ 0.42
DDX39A-216ENST00000591275 AMHR2Q16671 573 aa17.69■□□□□ 0.42
DDX39A-216ENST00000591275 GALNT17Q6IS24 598 aa17.69■□□□□ 0.42
DDX39A-216ENST00000591275 TPH2Q8IWU9 490 aa17.69■□□□□ 0.42
DDX39A-216ENST00000591275 HACE1Q8IYU2 909 aa17.69■□□□□ 0.42
DDX39A-216ENST00000591275 SUMF1Q8NBK3 374 aa17.69■□□□□ 0.42
DDX39A-216ENST00000591275 SHDQ96IW2 340 aa17.69■□□□□ 0.42
DDX39A-216ENST00000591275 PAAF1Q9BRP4 392 aa17.69■□□□□ 0.42
DDX39A-216ENST00000591275 ZSWIM4Q9H7M6 989 aa17.69■□□□□ 0.42
DDX39A-216ENST00000591275 PARP2Q9UGN5 583 aa17.69■□□□□ 0.42
DDX39A-216ENST00000591275 KINO60870 393 aaKnown RBP17.68■□□□□ 0.42
DDX39A-216ENST00000591275 CREMQ03060 361 aa17.68■□□□□ 0.42
DDX39A-216ENST00000591275 GRIK3Q13003 919 aa17.68■□□□□ 0.42
DDX39A-216ENST00000591275 TFDP1Q14186 410 aa17.68■□□□□ 0.42
DDX39A-216ENST00000591275 PPP4R3AQ6IN85 833 aa17.68■□□□□ 0.42
DDX39A-216ENST00000591275 POTEDQ86YR6 584 aa17.68■□□□□ 0.42
DDX39A-216ENST00000591275 GPR65Q8IYL9 337 aa17.68■□□□□ 0.42
DDX39A-216ENST00000591275 SPATA6Q9NWH7 488 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-216ENST00000591275 DLL3Q9NYJ7 618 aa17.68■□□□□ 0.42
DDX39A-216ENST00000591275 FBXW11Q9UKB1 542 aa17.68■□□□□ 0.42
DDX39A-216ENST00000591275 CDH7Q9ULB5 785 aa17.68■□□□□ 0.42
DDX39A-216ENST00000591275 POLIQ9UNA4 740 aa17.68■□□□□ 0.42
DDX39A-216ENST00000591275 MTF2Q9Y483 593 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-216ENST00000591275 ZFP37Q9Y6Q3 630 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-216ENST00000591275 KANSL1LA0AUZ9 987 aa17.67■□□□□ 0.42
DDX39A-216ENST00000591275 CCL16O15467 120 aa17.67■□□□□ 0.42
DDX39A-216ENST00000591275 DTNBO60941 627 aa17.67■□□□□ 0.42
DDX39A-216ENST00000591275 GCFC2P16383 781 aaKnown RBP17.67■□□□□ 0.42
DDX39A-216ENST00000591275 SPIRE1Q08AE8 756 aa17.67■□□□□ 0.42
DDX39A-216ENST00000591275 HSP90AA2PQ14568 343 aaPredicted RBP17.67■□□□□ 0.42
DDX39A-216ENST00000591275 UBXN2BQ14CS0 331 aa17.67■□□□□ 0.42
DDX39A-216ENST00000591275 RSPO4Q2I0M5 234 aaPredicted RBP17.67■□□□□ 0.42
DDX39A-216ENST00000591275 LIN9Q5TKA1 542 aa17.67■□□□□ 0.42
DDX39A-216ENST00000591275 PIK3AP1Q6ZUJ8 805 aa17.67■□□□□ 0.42
DDX39A-216ENST00000591275 RUFY3Q7L099 469 aa17.67■□□□□ 0.42
DDX39A-216ENST00000591275 CEP57Q86XR8 500 aa17.67■□□□□ 0.42
DDX39A-216ENST00000591275 IFNLR1Q8IU57 520 aaPredicted RBP17.67■□□□□ 0.42
DDX39A-216ENST00000591275 OXER1Q8TDS5 423 aa17.67■□□□□ 0.42
DDX39A-216ENST00000591275 PHF20Q9BVI0 1012 aa17.67■□□□□ 0.42
DDX39A-216ENST00000591275 GJB4Q9NTQ9 266 aa17.67■□□□□ 0.42
DDX39A-216ENST00000591275 SF3B1O75533 1304 aaKnown RBP eCLIP17.67■□□□□ 0.427e-10■■■■□ 23
DDX39A-216ENST00000591275 CASTOR2A6NHX0 329 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 TBX3O15119 743 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 LAMTOR5O43504 91 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 C8AP07357 584 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 CD72P21854 359 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 GLRA2P23416 452 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 MLF2Q15773 248 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-216ENST00000591275 PSMD5Q16401 504 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 SLC44A4Q53GD3 710 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 PPM1LQ5SGD2 360 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 SLC27A1Q6PCB7 646 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 ITFG1Q8TB96 612 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 FGF13Q92913 245 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 KXD1Q9BQD3 176 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 CLSTN3Q9BQT9 956 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 BCO2Q9BYV7 579 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 NCDNQ9UBB6 729 aa17.66■□□□□ 0.42
DDX39A-216ENST00000591275 PATJQ8NI35 1801 aa17.65■□□□□ 0.42
DDX39A-216ENST00000591275 A0A087WWV3 80 aa17.65■□□□□ 0.42
DDX39A-216ENST00000591275 ADAM12O43184 909 aa17.65■□□□□ 0.42
DDX39A-216ENST00000591275 SLITRK3O94933 977 aa17.65■□□□□ 0.42
DDX39A-216ENST00000591275 KIF4AO95239 1232 aa17.65■□□□□ 0.42
DDX39A-216ENST00000591275 ARL2P36404 184 aa17.65■□□□□ 0.42
DDX39A-216ENST00000591275 CSTF1Q05048 431 aaKnown RBP17.65■□□□□ 0.42
DDX39A-216ENST00000591275 POU5F1BQ06416 359 aa17.65■□□□□ 0.42
DDX39A-216ENST00000591275 TUSC3Q13454 348 aa17.65■□□□□ 0.42
DDX39A-216ENST00000591275 EARS2Q5JPH6 523 aaKnown RBP17.65■□□□□ 0.42
DDX39A-216ENST00000591275 FAM171A1Q5VUB5 890 aa17.65■□□□□ 0.42
DDX39A-216ENST00000591275 ERICH6BQ5W0A0 696 aa17.65■□□□□ 0.42
DDX39A-216ENST00000591275 CPLX2Q6PUV4 134 aaKnown RBP17.65■□□□□ 0.42
DDX39A-216ENST00000591275 MTSS1LQ765P7 747 aa17.65■□□□□ 0.42
DDX39A-216ENST00000591275 FAM177A1Q8N128 213 aaPredicted RBP17.65■□□□□ 0.42
DDX39A-216ENST00000591275 LNX1Q8TBB1 728 aaPredicted RBP17.65■□□□□ 0.42
DDX39A-216ENST00000591275 ZNF274Q96GC6 653 aaPredicted RBP17.65■□□□□ 0.42
DDX39A-216ENST00000591275 TTPALQ9BTX7 342 aa17.65■□□□□ 0.42
DDX39A-216ENST00000591275 DDX23Q9BUQ8 820 aaKnown RBP17.65■□□□□ 0.42
DDX39A-216ENST00000591275 ZSWIM6Q9HCJ5 1215 aa17.65■□□□□ 0.42
DDX39A-216ENST00000591275 A0A1B0GUA9 196 aa17.64■□□□□ 0.41
DDX39A-216ENST00000591275 FAM205CA6NFA0 338 aa17.64■□□□□ 0.41
DDX39A-216ENST00000591275 FAM170BA6NMN3 283 aa17.64■□□□□ 0.41
DDX39A-216ENST00000591275 HNRNPA1P09651 372 aaKnown RBP eCLIP17.64■□□□□ 0.41
DDX39A-216ENST00000591275 VARS2Q5ST30 1063 aaKnown RBP17.64■□□□□ 0.41
DDX39A-216ENST00000591275 CENPQQ7L2Z9 268 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-216ENST00000591275 SLC7A14Q8TBB6 771 aa17.64■□□□□ 0.41
DDX39A-216ENST00000591275 PIK3R5Q8WYR1 880 aa17.64■□□□□ 0.41
DDX39A-216ENST00000591275 CCDC43Q96MW1 224 aaKnown RBP17.64■□□□□ 0.41
DDX39A-216ENST00000591275 EIF2AK1Q9BQI3 630 aaKnown RBP17.64■□□□□ 0.41
DDX39A-216ENST00000591275 POLR3FQ9H1D9 316 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-216ENST00000591275 HCFC1R1Q9NWW0 138 aa17.64■□□□□ 0.41
DDX39A-216ENST00000591275 CYP46A1Q9Y6A2 500 aa17.64■□□□□ 0.41
DDX39A-216ENST00000591275 CHD8Q9HCK8 2581 aa17.64■□□□□ 0.41
DDX39A-216ENST00000591275 KMT2BQ9UMN6 2715 aaPredicted RBP17.63■□□□□ 0.41
DDX39A-216ENST00000591275 XYLBO75191 536 aa17.63■□□□□ 0.41
DDX39A-216ENST00000591275 DGAT1O75907 488 aa17.63■□□□□ 0.41
DDX39A-216ENST00000591275 BAG4O95429 457 aaKnown RBP17.63■□□□□ 0.41
DDX39A-216ENST00000591275 PRKCQQ04759 706 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms