RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 FGFR1P11362 822 aa23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 BTG3Q14201 252 aaPredicted RBP23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 DCAF4L1Q3SXM0 396 aa23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 SPATA1Q5VX52 437 aa23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 DUSP9Q99956 384 aaKnown RBP23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 GOLGA6L19H0YKK7 550 aa23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 HNRNPDLO14979 420 aaKnown RBP23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 GATMP50440 423 aa23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 LRRC63Q05C16 580 aa23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 ZNF568Q3ZCX4 644 aa23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 PAN2Q504Q3 1202 aaKnown RBP23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 ZNF697Q5TEC3 545 aa23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 GPR153Q6NV75 609 aa23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 ZPBP2Q6X784 338 aa23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 MAP4K3Q8IVH8 894 aa23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 SP7Q8TDD2 431 aaPredicted RBP23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 LPPQ93052 612 aa23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 ZNF689Q96CS4 500 aaPredicted RBP23.22■■□□□ 1.31
R3HDM4-204ENST00000589428 TBKBP1A7MCY6 615 aa23.21■■□□□ 1.31
R3HDM4-204ENST00000589428 ITGA4P13612 1032 aa23.21■■□□□ 1.31
R3HDM4-204ENST00000589428 LIG4P49917 911 aa23.21■■□□□ 1.31
R3HDM4-204ENST00000589428 EEF1DP3Q658K8 133 aa23.21■■□□□ 1.31
R3HDM4-204ENST00000589428 MRPL10Q7Z7H8 261 aaKnown RBP23.21■■□□□ 1.31
R3HDM4-204ENST00000589428 CMTR2Q8IYT2 770 aaKnown RBP23.21■■□□□ 1.31
R3HDM4-204ENST00000589428 SMG8Q8ND04 991 aaKnown RBP23.21■■□□□ 1.31
R3HDM4-204ENST00000589428 TCHPQ9BT92 498 aa23.21■■□□□ 1.31
R3HDM4-204ENST00000589428 TMEM117Q9H0C3 514 aa23.21■■□□□ 1.31
R3HDM4-204ENST00000589428 NXF3Q9H4D5 531 aaKnown RBP23.21■■□□□ 1.31
R3HDM4-204ENST00000589428 FANCLQ9NW38 375 aa23.21■■□□□ 1.31
R3HDM4-204ENST00000589428 ANKFY1Q9P2R3 1169 aa23.21■■□□□ 1.31
R3HDM4-204ENST00000589428 TOM1L1O75674 476 aa23.2■■□□□ 1.3
R3HDM4-204ENST00000589428 FOXR2Q6PJQ5 311 aa23.2■■□□□ 1.3
R3HDM4-204ENST00000589428 GLB1LQ6UWU2 654 aa23.2■■□□□ 1.3
R3HDM4-204ENST00000589428 FIBCD1Q8N539 461 aa23.2■■□□□ 1.3
R3HDM4-204ENST00000589428 HELQQ8TDG4 1101 aa23.2■■□□□ 1.3
R3HDM4-204ENST00000589428 RSPH1Q8WYR4 309 aa23.2■■□□□ 1.3
R3HDM4-204ENST00000589428 ACCSQ96QU6 501 aa23.2■■□□□ 1.3
R3HDM4-204ENST00000589428 APOL6Q9BWW8 343 aa23.2■■□□□ 1.3
R3HDM4-204ENST00000589428 TYW1Q9NV66 732 aaKnown RBP23.2■■□□□ 1.3
R3HDM4-204ENST00000589428 PDXKO00764 312 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 TGFB1I1O43294 461 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 CLLU1OSQ5K130 101 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 MPZL3Q6UWV2 235 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 TSG101Q99816 390 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 RSAD1Q9HA92 442 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 UBN1Q9NPG3 1134 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 SAMSN1Q9NSI8 373 aaKnown RBP23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 RNF19AQ9NV58 838 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 EXOC7Q9UPT5 735 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 TRAF3IP3Q9Y228 551 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 HES2Q9Y543 173 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 LINC01553A4QN01 128 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 MATR3P43243 847 aaKnown RBP eCLIP23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 MRE11P49959 708 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 CSGALNACT2Q8N6G5 542 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 GBP3Q9H0R5 595 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 CDT1Q9H211 546 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 TMEM206Q9H813 350 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 PTPRHQ9HD43 1115 aa23.19■■□□□ 1.3
R3HDM4-204ENST00000589428 MEIS3P2A8K0S8 358 aa23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 PIGRP01833 764 aa23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 ZNF18P17022 549 aa23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 PROZP22891 400 aa23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 TAP1Q03518 808 aa23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 NOLC1Q14978 699 aaKnown RBP eCLIP23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 TPD52L1Q16890 204 aaPredicted RBP23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 UVSSAQ2YD98 709 aa23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 HSP90AA4PQ58FG1 418 aa23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 AGMOQ6ZNB7 445 aa23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 LRRC55Q6ZSA7 311 aa23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 ZBTB33Q86T24 672 aa23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 SYCP3Q8IZU3 236 aa23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 LRRC43Q8N309 656 aa23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 EEF2KMTQ96G04 330 aa23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 MRPL9Q9BYD2 267 aaKnown RBP23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 ZNF576Q9H609 170 aa23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 INPP5FQ9Y2H2 1132 aa23.18■■□□□ 1.3
R3HDM4-204ENST00000589428 CLDN3O15551 220 aa23.17■■□□□ 1.3
R3HDM4-204ENST00000589428 MCF2P10911 925 aa23.17■■□□□ 1.3
R3HDM4-204ENST00000589428 HARSP12081 509 aaKnown RBP23.17■■□□□ 1.3
R3HDM4-204ENST00000589428 EDRF1Q3B7T1 1238 aa23.17■■□□□ 1.3
R3HDM4-204ENST00000589428 CDKAL1Q5VV42 579 aa23.17■■□□□ 1.3
R3HDM4-204ENST00000589428 URGCPQ8TCY9 931 aa23.17■■□□□ 1.3
R3HDM4-204ENST00000589428 CASD1Q96PB1 797 aa23.17■■□□□ 1.3
R3HDM4-204ENST00000589428 AGPAT3Q9NRZ7 376 aa23.17■■□□□ 1.3
R3HDM4-204ENST00000589428 PARP2Q9UGN5 583 aa23.17■■□□□ 1.3
R3HDM4-204ENST00000589428 FNDC1Q4ZHG4 1894 aaPredicted RBP23.17■■□□□ 1.3
R3HDM4-204ENST00000589428 TISP43B9A030 160 aa23.16■■□□□ 1.3
R3HDM4-204ENST00000589428 ARHGEF15O94989 841 aa23.16■■□□□ 1.3
R3HDM4-204ENST00000589428 ATP1A3P13637 1013 aa23.16■■□□□ 1.3
R3HDM4-204ENST00000589428 HS2ST1Q7LGA3 356 aa23.16■■□□□ 1.3
R3HDM4-204ENST00000589428 TGS1Q96RS0 853 aaKnown RBP23.16■■□□□ 1.3
R3HDM4-204ENST00000589428 SRRTQ9BXP5 876 aaKnown RBP23.16■■□□□ 1.3
R3HDM4-204ENST00000589428 RNF39Q9H2S5 420 aa23.16■■□□□ 1.3
R3HDM4-204ENST00000589428 GIT1Q9Y2X7 761 aa23.16■■□□□ 1.3
R3HDM4-204ENST00000589428 CALUO43852 315 aaPredicted RBP23.16■■□□□ 1.3
R3HDM4-204ENST00000589428 TPM4P67936 248 aa23.16■■□□□ 1.3
R3HDM4-204ENST00000589428 IRF2BP1Q8IU81 584 aa23.16■■□□□ 1.3
R3HDM4-204ENST00000589428 ZC3H3Q8IXZ2 948 aaKnown RBP23.16■■□□□ 1.3
R3HDM4-204ENST00000589428 ZBTB45Q96K62 511 aaPredicted RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms