RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 ENOX1Q8TC92 643 aaKnown RBP13.26□□□□□ -0.29
DNMT1-218ENST00000589294 CEP63Q96MT8 703 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 TSPAN18Q96SJ8 248 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 DUSP9Q99956 384 aaKnown RBP13.26□□□□□ -0.29
DNMT1-218ENST00000589294 BPIFA3Q9BQP9 254 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 FAM213AQ9BRX8 229 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 GZF1Q9H116 711 aaPredicted RBP13.26□□□□□ -0.29
DNMT1-218ENST00000589294 TOPORSQ9NS56 1045 aaPredicted RBP13.26□□□□□ -0.29
DNMT1-218ENST00000589294 PCDH10Q9P2E7 1040 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 CPSF3Q9UKF6 684 aaKnown RBP13.26□□□□□ -0.29
DNMT1-218ENST00000589294 CTNND2Q9UQB3 1225 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 FRMD4BQ9Y2L6 1034 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 HES2Q9Y543 173 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 SLC4A7Q9Y6M7 1214 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 ZBBXA8MT70 800 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 HARSP12081 509 aaKnown RBP13.25□□□□□ -0.29
DNMT1-218ENST00000589294 ATF7P17544 494 aaPredicted RBP13.25□□□□□ -0.29
DNMT1-218ENST00000589294 ACOT2P49753 483 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 CYP2J2P51589 502 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 STX17P56962 302 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 ZNF445P59923 1031 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 SHHQ15465 462 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 ANO6Q4KMQ2 910 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 SPATA1Q5VX52 437 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 LRSAM1Q6UWE0 723 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 ALKAL1Q6UXT8 129 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 AGMOQ6ZNB7 445 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 FILIP1Q7Z7B0 1213 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 CD302Q8IX05 232 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 CSGALNACT2Q8N6G5 542 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 MFSD14AQ96MC6 490 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 MED15Q96RN5 788 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 SLC9A7Q96T83 725 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 MKNK1Q9BUB5 465 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 DNAJC25Q9H1X3 360 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 RNF39Q9H2S5 420 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 NXF3Q9H4D5 531 aaKnown RBP13.25□□□□□ -0.29
DNMT1-218ENST00000589294 RPF1Q9H9Y2 349 aaKnown RBP13.25□□□□□ -0.29
DNMT1-218ENST00000589294 SNTG2Q9NY99 539 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 PARP2Q9UGN5 583 aa13.25□□□□□ -0.29
DNMT1-218ENST00000589294 TTC3P53804 2025 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 TRIM49BA6NDI0 452 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 INPPL1O15357 1258 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 OFD1O75665 1012 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 IL18RAPO95256 599 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 GNA14O95837 355 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 AKAP5P24588 427 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 PSMC2P35998 433 aaKnown RBP13.24□□□□□ -0.29
DNMT1-218ENST00000589294 MCCD1P59942 119 aaPredicted RBP13.24□□□□□ -0.29
DNMT1-218ENST00000589294 OSTNP61366 133 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 DEFB103AP81534 67 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 ENPEPQ07075 957 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 SURF1Q15526 300 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 ENOX2Q16206 610 aaKnown RBP13.24□□□□□ -0.29
DNMT1-218ENST00000589294 SNRNP35Q16560 246 aaKnown RBP13.24□□□□□ -0.29
DNMT1-218ENST00000589294 SLC10A6Q3KNW5 377 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 XKR4Q5GH76 650 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 GLB1LQ6UWU2 654 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 CEP120Q8N960 986 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 RNF169Q8NCN4 708 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 NOC3LQ8WTT2 800 aaKnown RBP13.24□□□□□ -0.29
DNMT1-218ENST00000589294 SAAL1Q96ER3 474 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 SRRTQ9BXP5 876 aaKnown RBP13.24□□□□□ -0.29
DNMT1-218ENST00000589294 ASB7Q9H672 318 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 RSAD1Q9HA92 442 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 CXXC1Q9P0U4 656 aaPredicted RBP13.24□□□□□ -0.29
DNMT1-218ENST00000589294 KANSL3Q9P2N6 904 aa13.24□□□□□ -0.29
DNMT1-218ENST00000589294 TTC26A0AVF1 554 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 GOLGA8IPA6NC78 632 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 ARL5CA6NH57 179 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 GOLGA8JA6NMD2 632 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 SMTNL1A8MU46 457 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 RBAK-RBAKDNI3L0D1 243 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 IKBKBO14920 756 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 SLC16A3O15427 465 aaKnown RBP13.23□□□□□ -0.29
DNMT1-218ENST00000589294 DGKIO75912 1065 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 AKAP3O75969 853 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 RECQL4O94761 1208 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 UPP2O95045 317 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 KCNE1P15382 129 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 ATP2A2P16615 1042 aaKnown RBP13.23□□□□□ -0.29
DNMT1-218ENST00000589294 TNFSF9P41273 254 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 ZNF165P49910 485 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 TPD52L1Q16890 204 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-218ENST00000589294 SEZ6Q53EL9 994 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 ZBTB41Q5SVQ8 909 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 C9orf50Q5SZB4 431 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 CEP135Q66GS9 1140 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 LRRC55Q6ZSA7 311 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 C11orf57Q6ZUT1 292 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-218ENST00000589294 FRMD5Q7Z6J6 570 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 USP37Q86T82 979 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 CBWD2Q8IUF1 395 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 HERC6Q8IVU3 1022 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 TMEM192Q8IY95 271 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 RDH13Q8NBN7 331 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 LPPQ93052 612 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 RNPC3Q96LT9 517 aaKnown RBP13.23□□□□□ -0.29
DNMT1-218ENST00000589294 APOL6Q9BWW8 343 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 TMEM117Q9H0C3 514 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms