RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 SSX2IPQ9Y2D8 614 aa14.46□□□□□ -0.09
ERBB2-220ENST00000584684 LOC730098B7Z3J9 87 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 H0YCG3 227 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 ABLIM1O14639 778 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 SLC16A4O15374 487 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 STX6O43752 255 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 C1RP00736 705 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 SSBP05455 408 aaKnown RBP eCLIP14.45□□□□□ -0.1
ERBB2-220ENST00000584684 MAPTP10636 758 aaKnown RBP14.45□□□□□ -0.1
ERBB2-220ENST00000584684 PDIA4P13667 645 aaKnown RBP14.45□□□□□ -0.1
ERBB2-220ENST00000584684 PLCG1P19174 1290 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 GRM5P41594 1212 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 GLUD2P49448 558 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 ZNF131P52739 623 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 SMTNP53814 917 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 DSG1Q02413 1049 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 ITIH3Q06033 890 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 ZNF568Q3ZCX4 644 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 ARSHQ5FYA8 562 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 LLGL2Q6P1M3 1020 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 DENND4AQ7Z401 1863 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 RAD54LQ92698 747 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 PLIN2Q99541 437 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 PHF7Q9BWX1 381 aaPredicted RBP14.45□□□□□ -0.1
ERBB2-220ENST00000584684 CHST7Q9NS84 486 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 KLK14Q9P0G3 267 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 LARSQ9P2J5 1176 aaKnown RBP14.45□□□□□ -0.1
ERBB2-220ENST00000584684 FBXO2Q9UK22 296 aaPredicted RBP14.45□□□□□ -0.1
ERBB2-220ENST00000584684 ADAM28Q9UKQ2 775 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 USP20Q9Y2K6 914 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 SRPRBQ9Y5M8 271 aaKnown RBP14.45□□□□□ -0.1
ERBB2-220ENST00000584684 CLIC4Q9Y696 253 aa14.45□□□□□ -0.1
ERBB2-220ENST00000584684 CITO14578 2027 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 SF3B1O75533 1304 aaKnown RBP eCLIP14.44□□□□□ -0.1
ERBB2-220ENST00000584684 PDCD11Q14690 1871 aaKnown RBP14.44□□□□□ -0.1
ERBB2-220ENST00000584684 THP07101 528 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 CNPP09543 421 aaKnown RBP14.44□□□□□ -0.1
ERBB2-220ENST00000584684 MCF2P10911 925 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 CLCN4P51793 760 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 NCKAP1LP55160 1127 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 HSP90AA2PQ14568 343 aaPredicted RBP14.44□□□□□ -0.1
ERBB2-220ENST00000584684 KARSQ15046 597 aaKnown RBP14.44□□□□□ -0.1
ERBB2-220ENST00000584684 XKR4Q5GH76 650 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 KIAA0319Q5VV43 1072 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 FUT10Q6P4F1 479 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 MPZL3Q6UWV2 235 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 ZPBP2Q6X784 338 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 GPBP1Q86WP2 473 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 LARP4BQ92615 738 aaKnown RBP14.44□□□□□ -0.1
ERBB2-220ENST00000584684 NECTIN4Q96NY8 510 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 KLHL5Q96PQ7 755 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 PPP1R10Q96QC0 940 aaKnown RBP14.44□□□□□ -0.1
ERBB2-220ENST00000584684 REEP2Q9BRK0 252 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 ADAM7Q9H2U9 754 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 RXFP1Q9HBX9 757 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 TOPORSQ9NS56 1045 aaPredicted RBP14.44□□□□□ -0.1
ERBB2-220ENST00000584684 STK17AQ9UEE5 414 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 GTF3C3Q9Y5Q9 886 aa14.44□□□□□ -0.1
ERBB2-220ENST00000584684 TRIP11Q15643 1979 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 SFI1A8K8P3 1242 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 F8W810 466 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 TMEM189-UBE2V1I3L0A0 370 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 TOM1L1O75674 476 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 ADH1AP07327 375 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 ALADP13716 330 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 EPCAMP16422 314 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 ABCD1P33897 745 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 CA8P35219 290 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 NASPP49321 788 aaPredicted RBP14.43□□□□□ -0.1
ERBB2-220ENST00000584684 CREMQ03060 361 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 RAD51AP2Q09MP3 1159 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 STRN3Q13033 797 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 HSCBQ8IWL3 235 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 TMEM87AQ8NBN3 555 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 RASSF8Q8NHQ8 419 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 CCDC94Q9BW85 323 aaPredicted RBP14.43□□□□□ -0.1
ERBB2-220ENST00000584684 TARS2Q9BW92 718 aaKnown RBP14.43□□□□□ -0.1
ERBB2-220ENST00000584684 EPHX3Q9H6B9 360 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 SFXN1Q9H9B4 322 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.43□□□□□ -0.1
ERBB2-220ENST00000584684 GDAQ9Y2T3 454 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 PLXNA3P51805 1871 aa14.43□□□□□ -0.1
ERBB2-220ENST00000584684 DCXO43602 365 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 GPR37L1O60883 481 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 KIF4AO95239 1232 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 PAPLNO95428 1278 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 YARSP54577 528 aaKnown RBP14.42□□□□□ -0.1
ERBB2-220ENST00000584684 NOLC1Q14978 699 aaKnown RBP eCLIP14.42□□□□□ -0.1
ERBB2-220ENST00000584684 SLC39A14Q15043 492 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 USP41Q3LFD5 358 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 HERC4Q5GLZ8 1057 aaPredicted RBP14.42□□□□□ -0.1
ERBB2-220ENST00000584684 KIAA1841Q6NSI8 718 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 CES5AQ6NT32 575 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 FAM173BQ6P4H8 233 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 ALKAL1Q6UXT8 129 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 TAS1R1Q7RTX1 841 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 EPSTI1Q96J88 318 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 SNX27Q96L92 541 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 FBXL18Q96ME1 805 aa14.42□□□□□ -0.1
ERBB2-220ENST00000584684 UROC1Q96N76 676 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms