RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	PTPRH	Q9HD43	1115 aa		13.83	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	CHST7	Q9NS84	486 aa		13.83	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	MIOS	Q9NXC5	875 aa		13.83	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	ADAM28	Q9UKQ2	775 aa		13.83	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	SRPRB	Q9Y5M8	271 aa	Known RBP	13.83	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	LOC730098	B7Z3J9	87 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	STX6	O43752	255 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	GPR37L1	O60883	481 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	TOM1L1	O75674	476 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	ADH1A	P07327	375 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	PROZ	P22891	400 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	CA8	P35219	290 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	GRM5	P41594	1212 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	MTHFR	P42898	656 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	YARS	P54577	528 aa	Known RBP	13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	DSG1	Q02413	1049 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	ELAVL2	Q12926	359 aa	Known RBP	13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	PTPA	Q15257	358 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	USP41	Q3LFD5	358 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	KIAA0319	Q5VV43	1072 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	EEF1DP3	Q658K8	133 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	PDXDC1	Q6P996	788 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	CYP26C1	Q6V0L0	522 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	TMEM161B	Q8NDZ6	487 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	HDAC7	Q8WUI4	952 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	RIPOR3	Q96MK2	946 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	UROC1	Q96N76	676 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	CCDC94	Q9BW85	323 aa	Predicted RBP	13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	RHOBTB2	Q9BYZ6	727 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	SNTG2	Q9NY99	539 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	KLK14	Q9P0G3	267 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	STK17A	Q9UEE5	414 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	CCDC39	Q9UFE4	941 aa		13.82	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.82	□□□□□ -0.2	1e-11	■■■■■ 43.1
CDK5RAP3-222	ENST00000581708	C5orf42	Q9H799	3197 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	TMEM189-UBE2V1	I3L0A0	370 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	PTGES	O14684	152 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	SLC16A4	O15374	487 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	DCX	O43602	365 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	TADA2A	O75478	443 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	EDN1	P05305	212 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	CNP	P09543	421 aa	Known RBP	13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	MAPT	P10636	758 aa	Known RBP	13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	LIG1	P18858	919 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	KLRC2	P26717	231 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	DDIT3	P35638	169 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	TXLNA	P40222	546 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	ZNF131	P52739	623 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	KYAT1	Q16773	422 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	ZNF568	Q3ZCX4	644 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	ARSH	Q5FYA8	562 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	XKR4	Q5GH76	650 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	KIAA1841	Q6NSI8	718 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	LLGL2	Q6P1M3	1020 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	FUT10	Q6P4F1	479 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	MPZL3	Q6UWV2	235 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	RASSF8	Q8NHQ8	419 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	RAD54L	Q92698	747 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	KLHL5	Q96PQ7	755 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	SLC38A7	Q9NVC3	462 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	FNIP2	Q9P278	1114 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	MTMR6	Q9Y217	621 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	MYH11	P35749	1972 aa		13.81	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	PLCG1	P19174	1290 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	CLCN4	P51793	760 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	NCKAP1L	P55160	1127 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	RBM10	P98175	930 aa	Known RBP	13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	SLC39A14	Q15043	492 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	NAB2	Q15742	525 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	TMEM31	Q5JXX7	168 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	ALKAL1	Q6UXT8	129 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	C15orf39	Q6ZRI6	1047 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	TAS1R3	Q7RTX0	852 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	GPBP1	Q86WP2	473 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	HSCB	Q8IWL3	235 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	CMAS	Q8NFW8	434 aa	Predicted RBP	13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	LARP4B	Q92615	738 aa	Known RBP	13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	DDX27	Q96GQ7	796 aa	Known RBP	13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	FBXL18	Q96ME1	805 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	PPP1R10	Q96QC0	940 aa	Known RBP	13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	TSPAN18	Q96SJ8	248 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	PLIN2	Q99541	437 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	TCHP	Q9BT92	498 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	TARS2	Q9BW92	718 aa	Known RBP	13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	CDT1	Q9H211	546 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	EPHX3	Q9H6B9	360 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	SFXN1	Q9H9B4	322 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	PARVG	Q9HBI0	331 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	POLD4	Q9HCU8	107 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	BLOC1S4	Q9NUP1	217 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	FBXO2	Q9UK22	296 aa	Predicted RBP	13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	NR2E1	Q9Y466	385 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	CLIC4	Q9Y696	253 aa		13.8	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	SFI1	A8K8P3	1242 aa		13.79	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	TRAPPC3	O43617	180 aa		13.79	□□□□□ -0.2
CDK5RAP3-222	ENST00000581708	PAPLN	O95428	1278 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms