RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 F8W810 466 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 GAS7O60861 476 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 RETP07949 1114 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 SFNP31947 248 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 RPS9P46781 194 aaKnown RBP11.98□□□□□ -0.49
TOP3A-210ENST00000580713 JAK3P52333 1124 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 MTAPQ13126 283 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 TOB2Q14106 344 aaPredicted RBP11.98□□□□□ -0.49
TOP3A-210ENST00000580713 PPP2R5DQ14738 602 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 RTN1Q16799 776 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 USP41Q3LFD5 358 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 XKR3Q5GH77 459 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 PPM1LQ5SGD2 360 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 LIN9Q5TKA1 542 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 IL31Q6EBC2 164 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 LILRA6Q6PI73 481 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 CELF5Q8N6W0 485 aaKnown RBP11.98□□□□□ -0.49
TOP3A-210ENST00000580713 TEKT3Q9BXF9 490 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 UBN1Q9NPG3 1134 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 PRMT8Q9NR22 394 aaPredicted RBP11.98□□□□□ -0.49
TOP3A-210ENST00000580713 SEMA4GQ9NTN9 838 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 FNIP2Q9P278 1114 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 NDRG2Q9UN36 371 aaKnown RBP11.98□□□□□ -0.49
TOP3A-210ENST00000580713 LIMCH1Q9UPQ0 1083 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 MYH15Q9Y2K3 1946 aa11.98□□□□□ -0.49
TOP3A-210ENST00000580713 CCL16O15467 120 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 LRP3O75074 770 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 XYLBO75191 536 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 PAPLNO95428 1278 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 C1RP00736 705 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 HOXB3P14651 431 aaPredicted RBP11.97□□□□□ -0.49
TOP3A-210ENST00000580713 NCLP19338 710 aaKnown RBP11.97□□□□□ -0.49
TOP3A-210ENST00000580713 SCNN1GP51170 649 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 FOXK1P85037 733 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 CREMQ03060 361 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 ADCY1Q08828 1119 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 FUT10Q6P4F1 479 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 PRR23CQ6ZRP0 262 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 MIER3Q7Z3K6 550 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 RNF168Q8IYW5 571 aaPredicted RBP11.97□□□□□ -0.49
TOP3A-210ENST00000580713 FBXL16Q8N461 479 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 CNNM3Q8NE01 707 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 ITFG1Q8TB96 612 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 CRYGNQ8WXF5 182 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 DDX1Q92499 740 aaKnown RBP11.97□□□□□ -0.49
TOP3A-210ENST00000580713 ZSCAN31Q96LW9 406 aaPredicted RBP11.97□□□□□ -0.49
TOP3A-210ENST00000580713 GAD1Q99259 594 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 APOL6Q9BWW8 343 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 NIFKQ9BYG3 293 aaKnown RBP11.97□□□□□ -0.49
TOP3A-210ENST00000580713 AGXT2Q9BYV1 514 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 GPR62Q9BZJ7 368 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 UNC45AQ9H3U1 944 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 CHST7Q9NS84 486 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 PATJQ8NI35 1801 aa11.97□□□□□ -0.49
TOP3A-210ENST00000580713 DOCK6Q96HP0 2047 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 CNOT1A5YKK6 2376 aaKnown RBP11.96□□□□□ -0.49
TOP3A-210ENST00000580713 IGKV6-21A0A0C4DH24 114 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 ARL5CA6NH57 179 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 GDF9O60383 454 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 HNRNPA1P09651 372 aaKnown RBP eCLIP11.96□□□□□ -0.49
TOP3A-210ENST00000580713 SRGAP2CP0DJJ0 459 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 MLH1P40692 756 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 CAMK2BQ13554 666 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 SIM2Q14190 667 aaPredicted RBP11.96□□□□□ -0.49
TOP3A-210ENST00000580713 UBXN11Q5T124 520 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 N4BP2L1Q5TBK1 243 aaPredicted RBP11.96□□□□□ -0.49
TOP3A-210ENST00000580713 LRCH2Q5VUJ6 765 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 APOA5Q6Q788 366 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 PRSS55Q6UWB4 352 aaPredicted RBP11.96□□□□□ -0.49
TOP3A-210ENST00000580713 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.96□□□□□ -0.49
TOP3A-210ENST00000580713 REXO1Q8N1G1 1221 aaKnown RBP11.96□□□□□ -0.49
TOP3A-210ENST00000580713 ING5Q8WYH8 240 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 BRF1Q92994 677 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 TMX3Q96JJ7 454 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 JPH2Q9BR39 696 aaPredicted RBP11.96□□□□□ -0.49
TOP3A-210ENST00000580713 IFT122Q9HBG6 1241 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 C6orf50Q9HD87 102 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 HEBP1Q9NRV9 189 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 MIOSQ9NXC5 875 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 COL4A3BPQ9Y5P4 624 aa11.96□□□□□ -0.49
TOP3A-210ENST00000580713 ADAMTS3O15072 1205 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 MSH4O15457 936 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 ZBTB43O43298 467 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 MAFO75444 373 aaPredicted RBP11.95□□□□□ -0.5
TOP3A-210ENST00000580713 TADA2AO75478 443 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 ERLIN2O94905 339 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 EFEMP2O95967 443 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 C8AP07357 584 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 HSP90AA1P07900 732 aaKnown RBP11.95□□□□□ -0.5
TOP3A-210ENST00000580713 HOXA11P31270 313 aaPredicted RBP11.95□□□□□ -0.5
TOP3A-210ENST00000580713 CIITAP33076 1130 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 DSC1Q08554 894 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 FUT2Q10981 343 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 CSRP2Q16527 193 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 SRGAP1Q7Z6B7 1085 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 SGMS1Q86VZ5 419 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 CEP57Q86XR8 500 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 SMG8Q8ND04 991 aaKnown RBP11.95□□□□□ -0.5
TOP3A-210ENST00000580713 RABGGTAQ92696 567 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 GJA10Q969M2 543 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms