RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 KIAA1841Q6NSI8 718 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 MPZL3Q6UWV2 235 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 DYMQ7RTS9 669 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 FAM178BQ8IXR5 827 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 COLGALT2Q8IYK4 626 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 PDILTQ8N807 584 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 LINC00301Q8NCQ3 95 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 TMEM161BQ8NDZ6 487 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 KCNG4Q8TDN1 519 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 LRRC15Q8TF66 581 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 BCL7CQ8WUZ0 217 aaPredicted RBP11.95□□□□□ -0.5
NDEL1-208ENST00000580237 AUTS2Q8WXX7 1259 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 NECAB3Q96P71 396 aaPredicted RBP11.95□□□□□ -0.5
NDEL1-208ENST00000580237 ACO2Q99798 780 aaKnown RBP11.95□□□□□ -0.5
NDEL1-208ENST00000580237 COLEC11Q9BWP8 271 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 ZBP1Q9H171 429 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 CDT1Q9H211 546 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 MORC2Q9Y6X9 1032 aaPredicted RBP11.95□□□□□ -0.5
NDEL1-208ENST00000580237 PLXNA3P51805 1871 aa11.95□□□□□ -0.5
NDEL1-208ENST00000580237 CASTOR2A6NHX0 329 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 C2CD2LO14523 706 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 TRAK2O60296 914 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 PPP6R2O75170 966 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 CXCL14O95715 111 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 THP07101 528 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 CTSAP10619 480 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 MAPTP10636 758 aaKnown RBP11.94□□□□□ -0.5
NDEL1-208ENST00000580237 MCF2P10911 925 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 IL9P15248 144 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 SCP2P22307 547 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 SSTR3P32745 418 aaPredicted RBP11.94□□□□□ -0.5
NDEL1-208ENST00000580237 ABCD1P33897 745 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 DDIT3P35638 169 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 ME1P48163 572 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 NCKAP1LP55160 1127 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 DLX2Q07687 328 aaPredicted RBP11.94□□□□□ -0.5
NDEL1-208ENST00000580237 DSC1Q08554 894 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 ADAM15Q13444 863 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 TUSC3Q13454 348 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 SMAD4Q13485 552 aaKnown RBP11.94□□□□□ -0.5
NDEL1-208ENST00000580237 PKP1Q13835 747 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 CTC1Q2NKJ3 1217 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 ARSHQ5FYA8 562 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 SV2BQ7L1I2 683 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 TAS1R3Q7RTX0 852 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 HAUS6Q7Z4H7 955 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 CEP120Q8N960 986 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 HERC2P3Q9BVR0 1158 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 EMILIN2Q9BXX0 1053 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 MRPL17Q9NRX2 175 aaKnown RBP11.94□□□□□ -0.5
NDEL1-208ENST00000580237 MARCH5Q9NX47 278 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 CFAP45Q9UL16 551 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 VWA8A3KMH1 1905 aa11.94□□□□□ -0.5
NDEL1-208ENST00000580237 ANK1P16157 1881 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 SF3B1O75533 1304 aaKnown RBP eCLIP11.93□□□□□ -0.54e-14■■■■■ 267.4
NDEL1-208ENST00000580237 C2orf71A6NGG8 1288 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 TNFRSF10AO00220 468 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 CLDN3O15551 220 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 CUTAO60888 179 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 TOM1L1O75674 476 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 GLP2RO95838 553 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 IDEP14735 1019 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 LTBRP36941 435 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 GRM5P41594 1212 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 GLUD2P49448 558 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 HSP90AA2PQ14568 343 aaPredicted RBP11.93□□□□□ -0.5
NDEL1-208ENST00000580237 ATL3Q6DD88 541 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 ZPBP2Q6X784 338 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 SFR1Q86XK3 245 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 MRPL43Q8N983 215 aaKnown RBP11.93□□□□□ -0.5
NDEL1-208ENST00000580237 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.93□□□□□ -0.5
NDEL1-208ENST00000580237 HASPINQ8TF76 798 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 RABGGTAQ92696 567 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 CASP10Q92851 521 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 NTPCRQ9BSD7 190 aaKnown RBP11.93□□□□□ -0.5
NDEL1-208ENST00000580237 PANK2Q9BZ23 570 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 MIOSQ9NXC5 875 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 CACNG4Q9UBN1 327 aa11.93□□□□□ -0.5
NDEL1-208ENST00000580237 MTCL1Q9Y4B5 1905 aaKnown RBP11.92□□□□□ -0.5
NDEL1-208ENST00000580237 GRXCR2A6NFK2 248 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 PTGESO14684 152 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 TADA2AO75478 443 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 SOD2P04179 222 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 GAP43P17677 238 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 ZNF131P52739 623 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 RBM10P98175 930 aaKnown RBP11.92□□□□□ -0.5
NDEL1-208ENST00000580237 DNM1Q05193 864 aaKnown RBP11.92□□□□□ -0.5
NDEL1-208ENST00000580237 PTPN14Q15678 1187 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 FUT10Q6P4F1 479 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 GSTCDQ8NEC7 633 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 DDX12PQ92771 950 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 DHX58Q96C10 678 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 SNX27Q96L92 541 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 ACAP3Q96P50 834 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 VN1R3Q9BXE9 311 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 MRPL44Q9H9J2 332 aaKnown RBP11.92□□□□□ -0.5
NDEL1-208ENST00000580237 SLC38A7Q9NVC3 462 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 FAM13BQ9NYF5 915 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 ADAM28Q9UKQ2 775 aa11.92□□□□□ -0.5
NDEL1-208ENST00000580237 TBX20Q9UMR3 447 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms