RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 C1RP00736 705 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 HSP90AA1P07900 732 aaKnown RBP11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 PLS3P13797 630 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 COL9A1P20849 921 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 MATR3P43243 847 aaKnown RBP eCLIP11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 NPTX2P47972 431 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 ECM1Q16610 540 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 USP41Q3LFD5 358 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 TMEM119Q4V9L6 283 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 HERC4Q5GLZ8 1057 aaPredicted RBP11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 RARS2Q5T160 578 aaKnown RBP11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 HSCBQ8IWL3 235 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 SYT2Q8N9I0 419 aaPredicted RBP11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 TDRD5Q8NAT2 981 aaKnown RBP11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 BCL7CQ8WUZ0 217 aaPredicted RBP11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 SPIRE2Q8WWL2 714 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 AUTS2Q8WXX7 1259 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 BICD1Q96G01 975 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 FBXL18Q96ME1 805 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 TCHPQ9BT92 498 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 RUSC1Q9BVN2 902 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 ADAM7Q9H2U9 754 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 SLC38A7Q9NVC3 462 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 MARCH5Q9NX47 278 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 SNTG2Q9NY99 539 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 KLK14Q9P0G3 267 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 TNFSF13BQ9Y275 285 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 ZNF318Q5VUA4 2279 aa11.17□□□□□ -0.62
SUPT6H-204ENST00000577939 MUC6Q6W4X9 2439 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 TECTAO75443 2155 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 ZDBF2Q9HCK1 2354 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 LOC730098B7Z3J9 87 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 TRAPPC3O43617 180 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 B4GALT3O60512 393 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 TADA2AO75478 443 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 FAM13AO94988 1023 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 PLA2G4BP0C869 781 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 MCF2P10911 925 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 PDIA4P13667 645 aaKnown RBP11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 CDC25AP30304 524 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 DSG1Q02413 1049 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 NOLC1Q14978 699 aaKnown RBP eCLIP11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 SF3A1Q15459 793 aaKnown RBP11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 ATAT1Q5SQI0 421 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 SYCE2Q6PIF2 218 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 MPZL3Q6UWV2 235 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 CYP26C1Q6V0L0 522 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 CCDC149Q6ZUS6 474 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 C1orf186Q6ZWK4 172 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 GPBP1Q86WP2 473 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 RNF135Q8IUD6 432 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 STAMQ92783 540 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 ACSF2Q96CM8 615 aaPredicted RBP11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 RPGRIP1Q96KN7 1286 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 MMTAG2Q9BU76 263 aaKnown RBP11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 ZSCAN16Q9H4T2 348 aaPredicted RBP11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 EPHX3Q9H6B9 360 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 CD320Q9NPF0 282 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 TSHZ2Q9NRE2 1034 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 CCDC39Q9UFE4 941 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 GDAQ9Y2T3 454 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 DOCK8Q8NF50 2099 aa11.16□□□□□ -0.62
SUPT6H-204ENST00000577939 ANK1P16157 1881 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 CASTOR2A6NHX0 329 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 K7ENM7 598 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 SLC16A4O15374 487 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 TOM1L1O75674 476 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 CNPP09543 421 aaKnown RBP11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 EPCAMP16422 314 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 GRM5P41594 1212 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 CLCN4P51793 760 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 AFF1P51825 1210 aaKnown RBP11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 SLC12A3P55017 1021 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 RBM10P98175 930 aaKnown RBP11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 IL17AQ16552 155 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 KYAT1Q16773 422 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 LIN9Q5TKA1 542 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 ZPBP2Q6X784 338 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 C15orf39Q6ZRI6 1047 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 RNF168Q8IYW5 571 aaPredicted RBP11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 CMASQ8NFW8 434 aaPredicted RBP11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 HDAC7Q8WUI4 952 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 KLHL5Q96PQ7 755 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 ACO2Q99798 780 aaKnown RBP11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 LRFN3Q9BTN0 628 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 APOL5Q9BWW9 433 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 VN1R3Q9BXE9 311 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 CDT1Q9H211 546 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 S1PR5Q9H228 398 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 PLEKHA4Q9H4M7 779 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 PARVGQ9HBI0 331 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 MAN1C1Q9NR34 630 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 FNIP2Q9P278 1114 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 ANKFY1Q9P2R3 1169 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 STK17AQ9UEE5 414 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 MUTYHQ9UIF7 546 aa11.15□□□□□ -0.62
SUPT6H-204ENST00000577939 FAM86C2PA6NEL3 165 aa11.14□□□□□ -0.63
SUPT6H-204ENST00000577939 TMEM189-UBE2V1I3L0A0 370 aa11.14□□□□□ -0.63
SUPT6H-204ENST00000577939 HNRNPDLO14979 420 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms