RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 USO1O60763 962 aaKnown RBP11.04□□□□□ -0.64
NCBP3-203ENST00000574379 F13A1P00488 732 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 ARL2P36404 184 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 NASPP49321 788 aaPredicted RBP11.04□□□□□ -0.64
NCBP3-203ENST00000574379 LAMTOR4Q0VGL1 99 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 NFX1Q12986 1120 aaKnown RBP11.04□□□□□ -0.64
NCBP3-203ENST00000574379 DSC3Q14574 896 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 ODR4Q5SWX8 454 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 FOXD4L5Q5VV16 416 aaPredicted RBP11.04□□□□□ -0.64
NCBP3-203ENST00000574379 KANK3Q6NY19 840 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 UNQ6494/PRO21346Q6UXR6 183 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 FAM43BQ6ZT52 329 aaPredicted RBP11.04□□□□□ -0.64
NCBP3-203ENST00000574379 TMC7Q7Z402 723 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 KCNK18Q7Z418 384 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 NPAS4Q8IUM7 802 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 ASAP3Q8TDY4 903 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 PRPF31Q8WWY3 499 aaKnown RBP11.04□□□□□ -0.64
NCBP3-203ENST00000574379 FOXD4L4Q8WXT5 416 aaPredicted RBP11.04□□□□□ -0.64
NCBP3-203ENST00000574379 NLRP4Q96MN2 994 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 SCLT1Q96NL6 688 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 GCOM2Q9BZD3 368 aaPredicted RBP11.04□□□□□ -0.64
NCBP3-203ENST00000574379 KCNK12Q9HB15 430 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 IFT122Q9HBG6 1241 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 PARD6AQ9NPB6 346 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 PUF60Q9UHX1 559 aaKnown RBP11.04□□□□□ -0.64
NCBP3-203ENST00000574379 FBXO2Q9UK22 296 aaPredicted RBP11.04□□□□□ -0.64
NCBP3-203ENST00000574379 RAB23Q9ULC3 237 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 HCFC2Q9Y5Z7 792 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 CITO14578 2027 aa11.04□□□□□ -0.64
NCBP3-203ENST00000574379 ARHGEF35A5YM69 484 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 E9PMD0 336 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 ASAP2O43150 1006 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 CYP11B2P19099 503 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 FGFR4P22455 802 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 PMLP29590 882 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 MARCKSP29966 332 aaPredicted RBP11.03□□□□□ -0.64
NCBP3-203ENST00000574379 LONP1P36776 959 aaKnown RBP11.03□□□□□ -0.64
NCBP3-203ENST00000574379 CEBPZQ03701 1054 aaKnown RBP11.03□□□□□ -0.64
NCBP3-203ENST00000574379 RING1Q06587 406 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 BECN1Q14457 450 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 MXD4Q14582 209 aaPredicted RBP11.03□□□□□ -0.64
NCBP3-203ENST00000574379 SLC39A14Q15043 492 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 TMEM119Q4V9L6 283 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 PADI6Q6TGC4 694 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 OTOP3Q7RTS5 596 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 CABP7Q86V35 215 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 MCPH1Q8NEM0 835 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 POLR3FQ9H1D9 316 aaPredicted RBP11.03□□□□□ -0.64
NCBP3-203ENST00000574379 BHMT2Q9H2M3 363 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 GPRC5CQ9NQ84 441 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 WNT16Q9UBV4 365 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 USTQ9Y2C2 406 aa11.03□□□□□ -0.64
NCBP3-203ENST00000574379 SRPRBQ9Y5M8 271 aaKnown RBP11.03□□□□□ -0.64
NCBP3-203ENST00000574379 PDCD11Q14690 1871 aaKnown RBP11.02□□□□□ -0.64
NCBP3-203ENST00000574379 TBKBP1A7MCY6 615 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 CSDE1O75534 798 aaKnown RBP11.02□□□□□ -0.65
NCBP3-203ENST00000574379 SRGAP2CP0DJJ0 459 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 GLRA2P23416 452 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 CAPSQ13938 189 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 KCNC3Q14003 757 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 KIAA1841Q6NSI8 718 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 TMC5Q6UXY8 1006 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 CCDC149Q6ZUS6 474 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 SRGAP1Q7Z6B7 1085 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 KCTD17Q8N5Z5 321 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 RNF149Q8NC42 400 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 LINC00301Q8NCQ3 95 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 LRRC15Q8TF66 581 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 DDX1Q92499 740 aaKnown RBP11.02□□□□□ -0.65
NCBP3-203ENST00000574379 ZNF396Q96N95 335 aaPredicted RBP11.02□□□□□ -0.65
NCBP3-203ENST00000574379 CLIC6Q96NY7 704 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 ADAM2Q99965 735 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 FOXQ1Q9C009 403 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 INO80BQ9C086 356 aaPredicted RBP11.02□□□□□ -0.65
NCBP3-203ENST00000574379 CCSER1Q9C0I3 900 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 NT5C3AQ9H0P0 336 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 CSRNP2Q9H175 543 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 MINDY3Q9H8M7 445 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 RGS18Q9NS28 235 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 TFIP11Q9UBB9 837 aaKnown RBP11.02□□□□□ -0.65
NCBP3-203ENST00000574379 DNM3Q9UQ16 869 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 ZDHHC9Q9Y397 364 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 PCDHGA2Q9Y5H1 932 aa11.02□□□□□ -0.65
NCBP3-203ENST00000574379 GCN1Q92616 2671 aaKnown RBP11.02□□□□□ -0.65
NCBP3-203ENST00000574379 FANCMQ8IYD8 2048 aa11.01□□□□□ -0.65
NCBP3-203ENST00000574379 DENND3A2RUS2 1198 aa11.01□□□□□ -0.65
NCBP3-203ENST00000574379 C9IYK1 514 aa11.01□□□□□ -0.65
NCBP3-203ENST00000574379 FSCN2O14926 492 aa11.01□□□□□ -0.65
NCBP3-203ENST00000574379 LRRN2O75325 713 aa11.01□□□□□ -0.65
NCBP3-203ENST00000574379 YEATS4O95619 227 aa11.01□□□□□ -0.65
NCBP3-203ENST00000574379 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
NCBP3-203ENST00000574379 SFPQP23246 707 aaKnown RBP eCLIP11.01□□□□□ -0.65
NCBP3-203ENST00000574379 UBA7P41226 1012 aa11.01□□□□□ -0.65
NCBP3-203ENST00000574379 PHKA2P46019 1235 aa11.01□□□□□ -0.65
NCBP3-203ENST00000574379 SARSP49591 514 aaKnown RBP11.01□□□□□ -0.65
NCBP3-203ENST00000574379 PTENP60484 403 aa11.01□□□□□ -0.65
NCBP3-203ENST00000574379 POU5F1BQ06416 359 aa11.01□□□□□ -0.65
NCBP3-203ENST00000574379 TFDP1Q14186 410 aa11.01□□□□□ -0.65
NCBP3-203ENST00000574379 STK38Q15208 465 aa11.01□□□□□ -0.65
NCBP3-203ENST00000574379 ZRSR1Q15695 479 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms