RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	NTPCR	Q9BSD7	190 aa	Known RBP	13.12	□□□□□ -0.31
ABR-222	ENST00000573667	HERC2P3	Q9BVR0	1158 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	CCDC94	Q9BW85	323 aa	Predicted RBP	13.12	□□□□□ -0.31
ABR-222	ENST00000573667	CD320	Q9NPF0	282 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.12	□□□□□ -0.31
ABR-222	ENST00000573667	MARCH5	Q9NX47	278 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	CCDC39	Q9UFE4	941 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	ODF2L	Q9ULJ1	636 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	USP15	Q9Y4E8	981 aa	Predicted RBP	13.12	□□□□□ -0.31
ABR-222	ENST00000573667	DENND4A	Q7Z401	1863 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	C5orf42	Q9H799	3197 aa		13.12	□□□□□ -0.31
ABR-222	ENST00000573667	TADA2A	O75478	443 aa		13.11	□□□□□ -0.31
ABR-222	ENST00000573667	PDIA4	P13667	645 aa	Known RBP	13.11	□□□□□ -0.31
ABR-222	ENST00000573667	ALAD	P13716	330 aa		13.11	□□□□□ -0.31
ABR-222	ENST00000573667	PLCG1	P19174	1290 aa		13.11	□□□□□ -0.31
ABR-222	ENST00000573667	KLRC2	P26717	231 aa		13.11	□□□□□ -0.31
ABR-222	ENST00000573667	MARCKS	P29966	332 aa	Predicted RBP	13.11	□□□□□ -0.31
ABR-222	ENST00000573667	GLUD2	P49448	558 aa		13.11	□□□□□ -0.31
ABR-222	ENST00000573667	CACNB1	Q02641	598 aa	Predicted RBP	13.11	□□□□□ -0.31
ABR-222	ENST00000573667	GRIN1	Q05586	938 aa		13.11	□□□□□ -0.31
ABR-222	ENST00000573667	FAM173B	Q6P4H8	233 aa		13.11	□□□□□ -0.31
ABR-222	ENST00000573667	GPBP1	Q86WP2	473 aa		13.11	□□□□□ -0.31
ABR-222	ENST00000573667	SPIRE2	Q8WWL2	714 aa		13.11	□□□□□ -0.31
ABR-222	ENST00000573667	ACO2	Q99798	780 aa	Known RBP	13.11	□□□□□ -0.31
ABR-222	ENST00000573667	TARS2	Q9BW92	718 aa	Known RBP	13.11	□□□□□ -0.31
ABR-222	ENST00000573667	APOL5	Q9BWW9	433 aa		13.11	□□□□□ -0.31
ABR-222	ENST00000573667	VN1R3	Q9BXE9	311 aa		13.11	□□□□□ -0.31
ABR-222	ENST00000573667	CCSER1	Q9C0I3	900 aa		13.11	□□□□□ -0.31
ABR-222	ENST00000573667	DZANK1	Q9NVP4	752 aa		13.11	□□□□□ -0.31
ABR-222	ENST00000573667	ADAM28	Q9UKQ2	775 aa		13.11	□□□□□ -0.31
ABR-222	ENST00000573667	MTMR6	Q9Y217	621 aa		13.11	□□□□□ -0.31
ABR-222	ENST00000573667	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	CASTOR2	A6NHX0	329 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	C19orf67	A6NJJ6	358 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	TBCA	O75347	108 aa	Known RBP	13.1	□□□□□ -0.31
ABR-222	ENST00000573667	FAM13A	O94988	1023 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	ADH1A	P07327	375 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	GRM5	P41594	1212 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	MATR3	P43243	847 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
ABR-222	ENST00000573667	ITIH3	Q06033	890 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	MCM6	Q14566	821 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.1	□□□□□ -0.31
ABR-222	ENST00000573667	CBX2	Q14781	532 aa	Predicted RBP	13.1	□□□□□ -0.31
ABR-222	ENST00000573667	PTPA	Q15257	358 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	FUT10	Q6P4F1	479 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	SYCE2	Q6PIF2	218 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	ELMSAN1	Q6PJG2	1045 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	MPZL3	Q6UWV2	235 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	ZBTB33	Q86T24	672 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	MYCT1	Q8N699	235 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	LARP4B	Q92615	738 aa	Known RBP	13.1	□□□□□ -0.31
ABR-222	ENST00000573667	RAD54L	Q92698	747 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	BICD1	Q96G01	975 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	KLHL5	Q96PQ7	755 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	REEP2	Q9BRK0	252 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	PHF7	Q9BWX1	381 aa	Predicted RBP	13.1	□□□□□ -0.31
ABR-222	ENST00000573667	CDT1	Q9H211	546 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	ZHX3	Q9H4I2	956 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	EPHX3	Q9H6B9	360 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	SRPRB	Q9Y5M8	271 aa	Known RBP	13.1	□□□□□ -0.31
ABR-222	ENST00000573667	ANK1	P16157	1881 aa		13.1	□□□□□ -0.31
ABR-222	ENST00000573667	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
ABR-222	ENST00000573667	TCHH	Q07283	1943 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	PI4K2B	G5E9Z4	385 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	PTGES	O14684	152 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	CNP	P09543	421 aa	Known RBP	13.09	□□□□□ -0.31
ABR-222	ENST00000573667	MCF2	P10911	925 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	HARS	P12081	509 aa	Known RBP	13.09	□□□□□ -0.31
ABR-222	ENST00000573667	EPCAM	P16422	314 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	SCP2	P22307	547 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	ABCD1	P33897	745 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	DDIT3	P35638	169 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	NCKAP1L	P55160	1127 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	OSTN	P61366	133 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	USP41	Q3LFD5	358 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	ARSH	Q5FYA8	562 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	SPECC1	Q5M775	1068 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	TAS1R3	Q7RTX0	852 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	RNF168	Q8IYW5	571 aa	Predicted RBP	13.09	□□□□□ -0.31
ABR-222	ENST00000573667	KRI1	Q8N9T8	703 aa	Known RBP	13.09	□□□□□ -0.31
ABR-222	ENST00000573667	TMEM161B	Q8NDZ6	487 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	SUSD6	Q92537	303 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	RABGGTA	Q92696	567 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	TTC28	Q96AY4	2481 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	EPSTI1	Q96J88	318 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	ZNF396	Q96N95	335 aa	Predicted RBP	13.09	□□□□□ -0.31
ABR-222	ENST00000573667	NECTIN4	Q96NY8	510 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	ACAP3	Q96P50	834 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	S1PR5	Q9H228	398 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	PARVG	Q9HBI0	331 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	BLOC1S4	Q9NUP1	217 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	ANKFY1	Q9P2R3	1169 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	STK17A	Q9UEE5	414 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	DPP7	Q9UHL4	492 aa		13.09	□□□□□ -0.31
ABR-222	ENST00000573667	FBXO2	Q9UK22	296 aa	Predicted RBP	13.09	□□□□□ -0.31
ABR-222	ENST00000573667		F8W810	466 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667		K7ENM7	598 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	CLDN3	O15551	220 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	DCX	O43602	365 aa		13.08	□□□□□ -0.32
ABR-222	ENST00000573667	TOM1L1	O75674	476 aa		13.08	□□□□□ -0.32

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