RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 ITIH3Q06033 890 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 PRPF4BQ13523 1007 aaKnown RBP13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 ECM1Q16610 540 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 FAM187BQ17R55 369 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 HERC4Q5GLZ8 1057 aaPredicted RBP13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 THSD4Q6ZMP0 1018 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 PPFIBP1Q86W92 1011 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 COLGALT2Q8IYK4 626 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 TBC1D32Q96NH3 1257 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 ADPGKQ9BRR6 497 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 EMILIN2Q9BXX0 1053 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 FZD8Q9H461 694 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 MRPL17Q9NRX2 175 aaKnown RBP13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 SMC3Q9UQE7 1217 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 ZMYM2Q9UBW7 1377 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 SOD2P04179 222 aa13.64□□□□□ -0.23
CTDNEP1-205ENST00000570828 EPCAMP16422 314 aa13.64□□□□□ -0.23
CTDNEP1-205ENST00000570828 EFNA5P52803 228 aa13.64□□□□□ -0.23
CTDNEP1-205ENST00000570828 DSC1Q08554 894 aa13.64□□□□□ -0.23
CTDNEP1-205ENST00000570828 GRIK3Q13003 919 aa13.64□□□□□ -0.23
CTDNEP1-205ENST00000570828 CABP7Q86V35 215 aa13.64□□□□□ -0.23
CTDNEP1-205ENST00000570828 ZNF454Q8N9F8 522 aa13.64□□□□□ -0.23
CTDNEP1-205ENST00000570828 NECTIN4Q96NY8 510 aa13.64□□□□□ -0.23
CTDNEP1-205ENST00000570828 KIFC3Q9BVG8 833 aa13.64□□□□□ -0.23
CTDNEP1-205ENST00000570828 HERC2P3Q9BVR0 1158 aa13.64□□□□□ -0.23
CTDNEP1-205ENST00000570828 ADAM7Q9H2U9 754 aa13.64□□□□□ -0.23
CTDNEP1-205ENST00000570828 PDZD7Q9H5P4 517 aa13.64□□□□□ -0.23
CTDNEP1-205ENST00000570828 MARCH5Q9NX47 278 aa13.64□□□□□ -0.23
CTDNEP1-205ENST00000570828 DNM3Q9UQ16 869 aa13.64□□□□□ -0.23
CTDNEP1-205ENST00000570828 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.64□□□□□ -0.23
CTDNEP1-205ENST00000570828 GOLGA8CPA6NN73 597 aa13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 PP2D1A8MPX8 630 aa13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 BHMG1C9JSJ3 638 aaPredicted RBP13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 ACKR2O00590 384 aa13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 C2CD2LO14523 706 aa13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 KLRC2P26717 231 aa13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 MTHFRP42898 656 aa13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 ATP2C1P98194 919 aaPredicted RBP13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 ZRSR1Q15695 479 aaKnown RBP13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 RARS2Q5T160 578 aaKnown RBP13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 RIPOR3Q96MK2 946 aa13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 COLEC11Q9BWP8 271 aa13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 CCDC113Q9H0I3 377 aa13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 MIOSQ9NXC5 875 aa13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 KLK14Q9P0G3 267 aa13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 SSX2IPQ9Y2D8 614 aa13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 NR2E1Q9Y466 385 aa13.63□□□□□ -0.23
CTDNEP1-205ENST00000570828 E9PMD0 336 aa13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 CNPP09543 421 aaKnown RBP13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 SP100P23497 879 aaPredicted RBP13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 GLUD2P49448 558 aa13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 DMP1Q13316 513 aaPredicted RBP13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 IL17AQ16552 155 aa13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 DCAF4L1Q3SXM0 396 aa13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 KIAA1841Q6NSI8 718 aa13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 APBB1IPQ7Z5R6 666 aaPredicted RBP13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 GSTCDQ8NEC7 633 aa13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 SLC22A17Q8WUG5 538 aa13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 DRC1Q96MC2 740 aa13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 KLHL5Q96PQ7 755 aa13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 SFXN1Q9H9B4 322 aa13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 POLD4Q9HCU8 107 aa13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 CDH22Q9UJ99 828 aa13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 TRIOO75962 3097 aa13.62□□□□□ -0.23
CTDNEP1-205ENST00000570828 VWA3AA6NCI4 1184 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 CCDC169A6NNP5 214 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 F8W810 466 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 RECQL4O94761 1208 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 ADH1AP07327 375 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 CDC25AP30304 524 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 CLCN4P51793 760 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 ATAT1Q5SQI0 421 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 ATF7IP2Q5U623 682 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 ELMSAN1Q6PJG2 1045 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 ZBTB33Q86T24 672 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 C12orf76Q8N812 135 aaPredicted RBP13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 EDAQ92838 391 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 CDK5RAP3Q96JB5 506 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 FBXL18Q96ME1 805 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 RUSC1Q9BVN2 902 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 NT5C3AQ9H0P0 336 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 POMKQ9H5K3 350 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 SNTG2Q9NY99 539 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 USP20Q9Y2K6 914 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 PHLPP2Q6ZVD8 1323 aa13.61□□□□□ -0.23
CTDNEP1-205ENST00000570828 CASTOR2A6NHX0 329 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 K7ERI5 159 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 LILRB3O75022 631 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 HIP1RO75146 1068 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 EDN1P05305 212 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 WEE2P0C1S8 567 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 NPTX2P47972 431 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 PEX3P56589 373 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 DSG1Q02413 1049 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 TUSC3Q13454 348 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 HSP90AA2PQ14568 343 aaPredicted RBP13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 EEF1DP3Q658K8 133 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 LARP1BQ659C4 914 aaKnown RBP13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 ARL6IP4Q66PJ3 421 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms