RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 GABREP78334 506 aa9.2□□□□□ -0.94
CDH11-216ENST00000569128 JAG1P78504 1218 aa9.2□□□□□ -0.94
CDH11-216ENST00000569128 LAPTM5Q13571 262 aa9.2□□□□□ -0.94
CDH11-216ENST00000569128 STAT4Q14765 748 aa9.2□□□□□ -0.94
CDH11-216ENST00000569128 RALGPS1Q5JS13 557 aa9.2□□□□□ -0.94
CDH11-216ENST00000569128 KCNT2Q6UVM3 1135 aa9.2□□□□□ -0.94
CDH11-216ENST00000569128 MFSD6Q6ZSS7 791 aa9.2□□□□□ -0.94
CDH11-216ENST00000569128 FAM83AQ86UY5 434 aa9.2□□□□□ -0.94
CDH11-216ENST00000569128 SPATS2Q86XZ4 545 aaKnown RBP9.2□□□□□ -0.94
CDH11-216ENST00000569128 MB21D2Q8IYB1 491 aaPredicted RBP9.2□□□□□ -0.94
CDH11-216ENST00000569128 TCEAL8Q8IYN2 117 aa9.2□□□□□ -0.94
CDH11-216ENST00000569128 TMEM52Q8NDY8 209 aa9.2□□□□□ -0.94
CDH11-216ENST00000569128 FCRL2Q96LA5 508 aaPredicted RBP9.2□□□□□ -0.94
CDH11-216ENST00000569128 ADAMTS10Q9H324 1103 aa9.2□□□□□ -0.94
CDH11-216ENST00000569128 EBF1Q9UH73 591 aa9.2□□□□□ -0.94
CDH11-216ENST00000569128 TRAF6Q9Y4K3 522 aa9.2□□□□□ -0.94
CDH11-216ENST00000569128 LAMB1P07942 1786 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 GOLGA6CA6NDK9 693 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 GOLGA6BA6NDN3 693 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 RANBP6O60518 1105 aaKnown RBP9.19□□□□□ -0.94
CDH11-216ENST00000569128 TBC1D8O95759 1140 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 HLA-DOAP06340 250 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 GOLGA6DP0CG33 693 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 AKR1B1P15121 316 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 VEGFAP15692 232 aaPredicted RBP9.19□□□□□ -0.94
CDH11-216ENST00000569128 RPS6KB1P23443 525 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 KRT32Q14532 448 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 RABEP1Q15276 862 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 ACBD5Q5T8D3 534 aaPredicted RBP9.19□□□□□ -0.94
CDH11-216ENST00000569128 FAM102BQ5T8I3 360 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 E4F1Q66K89 784 aaPredicted RBP9.19□□□□□ -0.94
CDH11-216ENST00000569128 PKN3Q6P5Z2 889 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 BLOC1S2Q6QNY1 142 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 LHFPL2Q6ZUX7 228 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 RUFY3Q7L099 469 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 ZBTB46Q86UZ6 589 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 APOBEC3FQ8IUX4 373 aaKnown RBP9.19□□□□□ -0.94
CDH11-216ENST00000569128 AMOTL1Q8IY63 956 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 NCOA7Q8NI08 942 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 SLC7A14Q8TBB6 771 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 DCAF4Q8WV16 495 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 DIO2Q92813 273 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 PTPRN2Q92932 1015 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 DCPSQ96C86 337 aaKnown RBP9.19□□□□□ -0.94
CDH11-216ENST00000569128 HOOK2Q96ED9 719 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 TTC14Q96N46 770 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 ALPK1Q96QP1 1244 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 G6PC3Q9BUM1 346 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 PHF20Q9BVI0 1012 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 GLIS2Q9BZE0 524 aaPredicted RBP9.19□□□□□ -0.94
CDH11-216ENST00000569128 TM6SF1Q9BZW5 370 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 DHX36Q9H2U1 1008 aaKnown RBP9.19□□□□□ -0.94
CDH11-216ENST00000569128 PAK6Q9NQU5 681 aaPredicted RBP9.19□□□□□ -0.94
CDH11-216ENST00000569128 AASDHPPTQ9NRN7 309 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 PCMTD2Q9NV79 361 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 GOLGA6AQ9NYA3 693 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 PI4KBQ9UBF8 816 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 SERPINB13Q9UIV8 391 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 SPEF1Q9Y4P9 236 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 ATRNL1Q5VV63 1379 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 ROBO3Q96MS0 1386 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 SCN4AP35499 1836 aa9.19□□□□□ -0.94
CDH11-216ENST00000569128 ORC4O43929 436 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 NMT2O60551 498 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 EFCAB14O75071 495 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 ADAMTS4O75173 837 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 SLC3A2P08195 630 aaKnown RBP9.18□□□□□ -0.94
CDH11-216ENST00000569128 LCP1P13796 627 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 PSMA5P28066 241 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 LTBRP36941 435 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 TFAP4Q01664 338 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 TNFAIP1Q13829 316 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 PRKG1Q13976 671 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 MBLAC2Q68D91 279 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 CYP2R1Q6VVX0 501 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 Q6ZUG5 572 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 RALYLQ86SE5 291 aaKnown RBP9.18□□□□□ -0.94
CDH11-216ENST00000569128 FOXP4Q8IVH2 680 aaPredicted RBP9.18□□□□□ -0.94
CDH11-216ENST00000569128 MAP6Q96JE9 813 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 HHIPL1Q96JK4 782 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 RNF41Q9H4P4 317 aaPredicted RBP9.18□□□□□ -0.94
CDH11-216ENST00000569128 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDH11-216ENST00000569128 PDRG1Q9NUG6 133 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.18□□□□□ -0.94
CDH11-216ENST00000569128 CYP46A1Q9Y6A2 500 aa9.18□□□□□ -0.94
CDH11-216ENST00000569128 COL2A1P02458 1487 aaPredicted RBP9.17□□□□□ -0.94
CDH11-216ENST00000569128 HMGB1P1B2RPK0 211 aaPredicted RBP9.17□□□□□ -0.94
CDH11-216ENST00000569128 TRAF5O00463 557 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 DTNBO60941 627 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 PPFIA4O75335 1185 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 ASLP04424 464 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 ZGLP1P0C6A0 271 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 FUT4P22083 530 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 AK2P54819 239 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 TRDNQ13061 729 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 KCNAB2Q13303 367 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 TOB2Q14106 344 aaPredicted RBP9.17□□□□□ -0.94
CDH11-216ENST00000569128 MLC1Q15049 377 aa9.17□□□□□ -0.94
CDH11-216ENST00000569128 PCBP1Q15365 356 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDH11-216ENST00000569128 INF2Q27J81 1249 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms