RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 CTAGE5O15320 804 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 ADAMTS4O75173 837 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 PPFIA4O75335 1185 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 SLITRK3O94933 977 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 LGALS2P05162 132 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 PFKFB1P16118 471 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 MARK3P27448 753 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 RPA1P27694 616 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 QARSP47897 775 aaKnown RBP8.63□□□□□ -1.03
SMG1-214ENST00000568038 CPT1AP50416 773 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 STAT5BP51692 787 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 PSMC5P62195 406 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 UBE2HP62256 183 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 C19orf57Q0VDD7 668 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 GRB10Q13322 594 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 IKBKEQ14164 716 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 FAM160B1Q5W0V3 765 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 CKAP2LQ8IYA6 745 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 MRPS27Q92552 414 aaKnown RBP8.63□□□□□ -1.03
SMG1-214ENST00000568038 WNT8BQ93098 351 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 ARMC5Q96C12 935 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 CALML4Q96GE6 196 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 HSD17B14Q9BPX1 270 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 LXNQ9BS40 222 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 POLR3CQ9BUI4 534 aaPredicted RBP8.63□□□□□ -1.03
SMG1-214ENST00000568038 RUSC1Q9BVN2 902 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 CCSER1Q9C0I3 900 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 TUFT1Q9NNX1 390 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 PAK6Q9NQU5 681 aaPredicted RBP8.63□□□□□ -1.03
SMG1-214ENST00000568038 DDX19AQ9NUU7 478 aaKnown RBP8.63□□□□□ -1.03
SMG1-214ENST00000568038 PCMTD2Q9NV79 361 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 WRAP73Q9P2S5 460 aaPredicted RBP8.63□□□□□ -1.03
SMG1-214ENST00000568038 CCDC39Q9UFE4 941 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 KCNH3Q9ULD8 1083 aa8.63□□□□□ -1.03
SMG1-214ENST00000568038 KDM3AQ9Y4C1 1321 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 IGKV6D-21A0A0A0MT36 114 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 POLR2DO15514 142 aaKnown RBP8.62□□□□□ -1.03
SMG1-214ENST00000568038 ZNF862O60290 1169 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 ZEB2O60315 1214 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 IGLV1-40P01703 118 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 TFRCP02786 760 aaKnown RBP8.62□□□□□ -1.03
SMG1-214ENST00000568038 LIG1P18858 919 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 PLCG1P19174 1290 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 SYKP43405 635 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 NDUFA8P51970 172 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 PSMC6P62333 389 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 LRRC41Q15345 812 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 KCNA10Q16322 511 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 RRAGBQ5VZM2 374 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 CCDC73Q6ZRK6 1079 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 RNF180Q86T96 592 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 TRIM42Q8IWZ5 723 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 ARRDC4Q8NCT1 418 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 KLHDC9Q8NEP7 349 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 NEK9Q8TD19 979 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 PIGOQ8TEQ8 1089 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 PPP1R13LQ8WUF5 828 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 ATP6V0A1Q93050 837 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 DHX58Q96C10 678 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 FAM46AQ96IP4 442 aaKnown RBP8.62□□□□□ -1.03
SMG1-214ENST00000568038 C16orf70Q9BSU1 422 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 KCNF1Q9H3M0 494 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 SMARCAD1Q9H4L7 1026 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 ZSWIM4Q9H7M6 989 aa8.62□□□□□ -1.03
SMG1-214ENST00000568038 EMSYQ7Z589 1322 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 IGSF9BQ9UPX0 1349 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 HMX2A2RU54 273 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 TMEM150BA6NC51 233 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 E9PMD0 336 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 H3BRB1 525 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 KPNA6O60684 536 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 DKC1O60832 514 aaKnown RBP eCLIP8.61□□□□□ -1.03
SMG1-214ENST00000568038 ZNF202O95125 648 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 SSBP05455 408 aaKnown RBP eCLIP8.61□□□□□ -1.03
SMG1-214ENST00000568038 ASGR1P07306 291 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 GJB1P08034 283 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 CST5P28325 142 aaPredicted RBP8.61□□□□□ -1.03
SMG1-214ENST00000568038 STAT6P42226 847 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 NKX3-2P78367 333 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 PURAQ00577 322 aaKnown RBP8.61□□□□□ -1.03
SMG1-214ENST00000568038 PRKCEQ02156 737 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 DHX8Q14562 1220 aaKnown RBP8.61□□□□□ -1.03
SMG1-214ENST00000568038 PLCB4Q15147 1175 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 NFKBIBQ15653 356 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 TMEM119Q4V9L6 283 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 HYIQ5T013 277 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 CCSAPQ6IQ19 270 aaPredicted RBP8.61□□□□□ -1.03
SMG1-214ENST00000568038 FDX2Q6P4F2 183 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 CXCL17Q6UXB2 119 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 PLPPR4Q7Z2D5 763 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 KCNK18Q7Z418 384 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 C4orf19Q8IY42 314 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 PCSK9Q8NBP7 692 aaKnown RBP8.61□□□□□ -1.03
SMG1-214ENST00000568038 AFAP1L1Q8TED9 768 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 LRRC15Q8TF66 581 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 U2AF1L4Q8WU68 220 aaKnown RBP8.61□□□□□ -1.03
SMG1-214ENST00000568038 KAT2BQ92831 832 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 SH2D3AQ9BRG2 576 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 NT5C3AQ9H0P0 336 aa8.61□□□□□ -1.03
SMG1-214ENST00000568038 RNPEPQ9H4A4 650 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms