RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 ZMYND10O75800 440 aa12.84□□□□□ -0.35
NSMCE1-209ENST00000565384 LAMP2P13473 410 aa12.84□□□□□ -0.35
NSMCE1-209ENST00000565384 FDPSP14324 419 aaKnown RBP12.84□□□□□ -0.35
NSMCE1-209ENST00000565384 TXKP42681 527 aa12.84□□□□□ -0.35
NSMCE1-209ENST00000565384 HTR4Q13639 388 aa12.84□□□□□ -0.35
NSMCE1-209ENST00000565384 HSP90AA2PQ14568 343 aaPredicted RBP12.84□□□□□ -0.35
NSMCE1-209ENST00000565384 PRSS55Q6UWB4 352 aaPredicted RBP12.84□□□□□ -0.35
NSMCE1-209ENST00000565384 MAEAQ7L5Y9 396 aa12.84□□□□□ -0.35
NSMCE1-209ENST00000565384 HASPINQ8TF76 798 aa12.84□□□□□ -0.35
NSMCE1-209ENST00000565384 PAAF1Q9BRP4 392 aa12.84□□□□□ -0.35
NSMCE1-209ENST00000565384 GPRC5CQ9NQ84 441 aa12.84□□□□□ -0.35
NSMCE1-209ENST00000565384 ARHGEF3Q9NR81 526 aa12.84□□□□□ -0.35
NSMCE1-209ENST00000565384 NUMBLQ9Y6R0 609 aa12.84□□□□□ -0.35
NSMCE1-209ENST00000565384 SF3B1O75533 1304 aaKnown RBP eCLIP12.84□□□□□ -0.35
NSMCE1-209ENST00000565384 CASTOR2A6NHX0 329 aa12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 POTEMA6NI47 508 aa12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 ANHXE9PGG2 379 aa12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 WNT7AO00755 349 aa12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 KIF4AO95239 1232 aa12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 ID4P47928 161 aa12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 TUSC3Q13454 348 aa12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 SPECC1Q5M775 1068 aa12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 PHLDB3Q6NSJ2 640 aa12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 PPP4R3CPQ6ZMV5 832 aa12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 ST13P5Q8NFI4 369 aaPredicted RBP12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 PRIMPOLQ96LW4 560 aa12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 MTMR9Q96QG7 549 aa12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 SLC2A4RGQ9NR83 387 aa12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 PRMT7Q9NVM4 692 aaPredicted RBP12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 FBXW11Q9UKB1 542 aa12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 DOCK8Q8NF50 2099 aa12.83□□□□□ -0.36
NSMCE1-209ENST00000565384 MTCL1Q9Y4B5 1905 aaKnown RBP12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 BTBD18B2RXH4 712 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 PTGESO14684 152 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 DCNP07585 359 aaKnown RBP12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 XRCC6P12956 609 aaKnown RBP eCLIP12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 FSHRP23945 695 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 ANKRD1Q15327 319 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 LIN9Q5TKA1 542 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 FAM171A1Q5VUB5 890 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 CDCA2Q69YH5 1023 aaPredicted RBP12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 DCLRE1AQ6PJP8 1040 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 ERMP1Q7Z2K6 904 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 GRASPQ7Z6J2 395 aaPredicted RBP12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 CEP57Q86XR8 500 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 ZBTB8OSQ8IWT0 167 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 NECAB1Q8N987 351 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 KCNG4Q8TDN1 519 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 PIK3R5Q8WYR1 880 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 CLSTN3Q9BQT9 956 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 TTPALQ9BTX7 342 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 FZD8Q9H461 694 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 SNTG2Q9NY99 539 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 SIT1Q9Y3P8 196 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 ZFP37Q9Y6Q3 630 aaPredicted RBP12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 CFAP54Q96N23 3096 aa12.82□□□□□ -0.36
NSMCE1-209ENST00000565384 DMDP11532 3685 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 PTPRZ1P23471 2315 aaPredicted RBP12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 TTLL13PA6NNM8 815 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 N4BP3O15049 544 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 RECQL4O94761 1208 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 LARGE1O95461 756 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 LMNAP02545 664 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 C8AP07357 584 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 HNRNPA1P09651 372 aaKnown RBP eCLIP12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 SPATA31C1P0DKV0 1188 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 ATP2B1P20020 1258 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 FOSBP53539 338 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 NTHL1P78549 312 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 PSMD5Q16401 504 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 ME3Q16798 604 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 FAM187BQ17R55 369 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 TMEM132AQ24JP5 1023 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 PPM1LQ5SGD2 360 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 DIS3L2Q8IYB7 885 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 MCPH1Q8NEM0 835 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 LNX1Q8TBB1 728 aaPredicted RBP12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 FGF14Q92915 247 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 GTF3C6Q969F1 213 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 RPP25Q9BUL9 199 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 SEMA4AQ9H3S1 761 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 PDZD7Q9H5P4 517 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 DLGAP2Q9P1A6 1054 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 CDH7Q9ULB5 785 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 R4GN57 208 aa12.81□□□□□ -0.36
NSMCE1-209ENST00000565384 FAM186AA6NE01 2351 aa12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 CCL16O15467 120 aa12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 MED24O75448 989 aa12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 THP07101 528 aa12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 GPC5P78333 572 aa12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 PRPF4BQ13523 1007 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 TRIM29Q14134 588 aa12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 NAB2Q15742 525 aa12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 PARM1Q6UWI2 310 aa12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 CATSPER3Q86XQ3 398 aa12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 NSUN7Q8NE18 718 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 PJA1Q8NG27 643 aa12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 BSNDQ8WZ55 320 aa12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 FOXQ1Q9C009 403 aa12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 C2orf40Q9H1Z8 148 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms