RNA–Protein interactions for RNA: ENST00000563919.1

SCAPER-209, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-209ENST00000563919 RFC5P40937 340 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 NTHL1P78549 312 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 LMNB2Q03252 620 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 PCBP1Q15365 356 aaKnown RBP eCLIP16.43■□□□□ 0.22
SCAPER-209ENST00000563919 NOTUMQ6P988 496 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 FERMT3Q86UX7 667 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 RNF149Q8NC42 400 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 GSTCDQ8NEC7 633 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 FGF13Q92913 245 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 SLC26A6Q9BXS9 759 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 C22orf23Q9BZE7 217 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 SH3GLB2Q9NR46 395 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 FBXW11Q9UKB1 542 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 ADAM28Q9UKQ2 775 aa16.43■□□□□ 0.22
SCAPER-209ENST00000563919 CDV3Q9UKY7 258 aaKnown RBP16.43■□□□□ 0.22
SCAPER-209ENST00000563919 DCDC2BA2VCK2 349 aa16.42■□□□□ 0.22
SCAPER-209ENST00000563919 CPLX1O14810 134 aa16.42■□□□□ 0.22
SCAPER-209ENST00000563919 HNRNPA1P09651 372 aaKnown RBP eCLIP16.42■□□□□ 0.22
SCAPER-209ENST00000563919 CD72P21854 359 aa16.42■□□□□ 0.22
SCAPER-209ENST00000563919 NLRP5P59047 1200 aa16.42■□□□□ 0.22
SCAPER-209ENST00000563919 PFKPQ01813 784 aa16.42■□□□□ 0.22
SCAPER-209ENST00000563919 TOB2Q14106 344 aaPredicted RBP16.42■□□□□ 0.22
SCAPER-209ENST00000563919 ZBTB41Q5SVQ8 909 aa16.42■□□□□ 0.22
SCAPER-209ENST00000563919 MOXD1Q6UVY6 613 aa16.42■□□□□ 0.22
SCAPER-209ENST00000563919 ITFG1Q8TB96 612 aa16.42■□□□□ 0.22
SCAPER-209ENST00000563919 TCP11Q8WWU5 503 aa16.42■□□□□ 0.22
SCAPER-209ENST00000563919 CLDN23Q96B33 292 aa16.42■□□□□ 0.22
SCAPER-209ENST00000563919 CPB2Q96IY4 423 aa16.42■□□□□ 0.22
SCAPER-209ENST00000563919 CSRNP2Q9H175 543 aa16.42■□□□□ 0.22
SCAPER-209ENST00000563919 LTB4R2Q9NPC1 389 aa16.42■□□□□ 0.22
SCAPER-209ENST00000563919 WRAP73Q9P2S5 460 aaPredicted RBP16.42■□□□□ 0.22
SCAPER-209ENST00000563919 M0R2N6 131 aa16.41■□□□□ 0.22
SCAPER-209ENST00000563919 TBC1D4O60343 1298 aa16.41■□□□□ 0.22
SCAPER-209ENST00000563919 DKC1O60832 514 aaKnown RBP eCLIP16.41■□□□□ 0.22
SCAPER-209ENST00000563919 TADA2AO75478 443 aa16.41■□□□□ 0.22
SCAPER-209ENST00000563919 P4HBP07237 508 aaKnown RBP16.41■□□□□ 0.22
SCAPER-209ENST00000563919 IFNAR1P17181 557 aa16.41■□□□□ 0.22
SCAPER-209ENST00000563919 PTENP60484 403 aa16.41■□□□□ 0.22
SCAPER-209ENST00000563919 NCBP1Q09161 790 aaKnown RBP16.41■□□□□ 0.22
SCAPER-209ENST00000563919 PPP2R5CQ13362 524 aa16.41■□□□□ 0.22
SCAPER-209ENST00000563919 RTP2Q5QGT7 225 aa16.41■□□□□ 0.22
SCAPER-209ENST00000563919 PRSS55Q6UWB4 352 aaPredicted RBP16.41■□□□□ 0.22
SCAPER-209ENST00000563919 TRIM22Q8IYM9 498 aa16.41■□□□□ 0.22
SCAPER-209ENST00000563919 RABGGTAQ92696 567 aa16.41■□□□□ 0.22
SCAPER-209ENST00000563919 CLSTN3Q9BQT9 956 aa16.41■□□□□ 0.22
SCAPER-209ENST00000563919 RTKNQ9BST9 563 aa16.41■□□□□ 0.22
SCAPER-209ENST00000563919 APOL6Q9BWW8 343 aa16.41■□□□□ 0.22
SCAPER-209ENST00000563919 BMP2KQ9NSY1 1161 aaPredicted RBP16.41■□□□□ 0.22
SCAPER-209ENST00000563919 DDX25Q9UHL0 483 aaKnown RBP16.41■□□□□ 0.22
SCAPER-209ENST00000563919 VAV3Q9UKW4 847 aa16.41■□□□□ 0.22
SCAPER-209ENST00000563919 PCDHA4Q9UN74 947 aa16.41■□□□□ 0.22
SCAPER-209ENST00000563919 SPEGQ15772 3267 aa16.41■□□□□ 0.22
SCAPER-209ENST00000563919 NOTCH4Q99466 2003 aa16.4■□□□□ 0.22
SCAPER-209ENST00000563919 CDKL5O76039 1030 aa16.4■□□□□ 0.22
SCAPER-209ENST00000563919 AKAP5P24588 427 aa16.4■□□□□ 0.22
SCAPER-209ENST00000563919 HOXA9P31269 272 aa16.4■□□□□ 0.22
SCAPER-209ENST00000563919 RPS9P46781 194 aaKnown RBP16.4■□□□□ 0.22
SCAPER-209ENST00000563919 NEK4P51957 841 aa16.4■□□□□ 0.22
SCAPER-209ENST00000563919 EMC2Q15006 297 aa16.4■□□□□ 0.22
SCAPER-209ENST00000563919 AMHR2Q16671 573 aa16.4■□□□□ 0.22
SCAPER-209ENST00000563919 PPM1LQ5SGD2 360 aa16.4■□□□□ 0.22
SCAPER-209ENST00000563919 LIN9Q5TKA1 542 aa16.4■□□□□ 0.22
SCAPER-209ENST00000563919 TSSK4Q6SA08 328 aa16.4■□□□□ 0.22
SCAPER-209ENST00000563919 HACE1Q8IYU2 909 aa16.4■□□□□ 0.22
SCAPER-209ENST00000563919 NELL2Q99435 816 aa16.4■□□□□ 0.22
SCAPER-209ENST00000563919 KXD1Q9BQD3 176 aa16.4■□□□□ 0.22
SCAPER-209ENST00000563919 NXF3Q9H4D5 531 aaKnown RBP16.4■□□□□ 0.22
SCAPER-209ENST00000563919 PARD6AQ9NPB6 346 aa16.4■□□□□ 0.22
SCAPER-209ENST00000563919 USP18Q9UMW8 372 aa16.4■□□□□ 0.22
SCAPER-209ENST00000563919 CCL16O15467 120 aa16.39■□□□□ 0.21
SCAPER-209ENST00000563919 SLC37A4O43826 429 aa16.39■□□□□ 0.21
SCAPER-209ENST00000563919 XYLBO75191 536 aa16.39■□□□□ 0.21
SCAPER-209ENST00000563919 C8AP07357 584 aa16.39■□□□□ 0.21
SCAPER-209ENST00000563919 TARSP26639 723 aaKnown RBP16.39■□□□□ 0.21
SCAPER-209ENST00000563919 YWHABP31946 246 aaKnown RBP16.39■□□□□ 0.21
SCAPER-209ENST00000563919 CCT2P78371 535 aaKnown RBP16.39■□□□□ 0.21
SCAPER-209ENST00000563919 GRIK3Q13003 919 aa16.39■□□□□ 0.21
SCAPER-209ENST00000563919 FZD5Q13467 585 aa16.39■□□□□ 0.21
SCAPER-209ENST00000563919 MXD4Q14582 209 aaPredicted RBP16.39■□□□□ 0.21
SCAPER-209ENST00000563919 ST3GAL2Q16842 350 aa16.39■□□□□ 0.21
SCAPER-209ENST00000563919 IFNLR1Q8IU57 520 aaPredicted RBP16.39■□□□□ 0.21
SCAPER-209ENST00000563919 C4orf19Q8IY42 314 aa16.39■□□□□ 0.21
SCAPER-209ENST00000563919 LNX1Q8TBB1 728 aaPredicted RBP16.39■□□□□ 0.21
SCAPER-209ENST00000563919 FAM20AQ96MK3 541 aa16.39■□□□□ 0.21
SCAPER-209ENST00000563919 PAAF1Q9BRP4 392 aa16.39■□□□□ 0.21
SCAPER-209ENST00000563919 TTPALQ9BTX7 342 aa16.39■□□□□ 0.21
SCAPER-209ENST00000563919 TRIM6Q9C030 488 aaPredicted RBP16.39■□□□□ 0.21
SCAPER-209ENST00000563919 SLKQ9H2G2 1235 aaPredicted RBP16.39■□□□□ 0.21
SCAPER-209ENST00000563919 PRMT8Q9NR22 394 aaPredicted RBP16.39■□□□□ 0.21
SCAPER-209ENST00000563919 SF3B1O75533 1304 aaKnown RBP eCLIP16.39■□□□□ 0.21
SCAPER-209ENST00000563919 ATRXP46100 2492 aa16.38■□□□□ 0.21
SCAPER-209ENST00000563919 INO80B-WBP1J3KQ70 363 aa16.38■□□□□ 0.21
SCAPER-209ENST00000563919 ZBTB39O15060 712 aa16.38■□□□□ 0.21
SCAPER-209ENST00000563919 NCAM2O15394 837 aa16.38■□□□□ 0.21
SCAPER-209ENST00000563919 ADRB1P08588 477 aa16.38■□□□□ 0.21
SCAPER-209ENST00000563919 POU2F2P09086 479 aa16.38■□□□□ 0.21
SCAPER-209ENST00000563919 ARF4P18085 180 aaPredicted RBP16.38■□□□□ 0.21
SCAPER-209ENST00000563919 RBM25P49756 843 aaKnown RBP16.38■□□□□ 0.21
SCAPER-209ENST00000563919 MBTD1Q05BQ5 628 aa16.38■□□□□ 0.21
SCAPER-209ENST00000563919 POU5F1BQ06416 359 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms