RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 NR5A1Q13285 461 aa20.7■□□□□ 0.9
NME3-204ENST00000563498 TUSC3Q13454 348 aa20.7■□□□□ 0.9
NME3-204ENST00000563498 HSP90AA2PQ14568 343 aaPredicted RBP20.7■□□□□ 0.9
NME3-204ENST00000563498 CALCRLQ16602 461 aa20.7■□□□□ 0.9
NME3-204ENST00000563498 POTEGQ6S5H5 508 aa20.7■□□□□ 0.9
NME3-204ENST00000563498 PPP4R3CPQ6ZMV5 832 aa20.7■□□□□ 0.9
NME3-204ENST00000563498 POLR3FQ9H1D9 316 aaPredicted RBP20.7■□□□□ 0.9
NME3-204ENST00000563498 TTC12Q9H892 705 aaPredicted RBP20.7■□□□□ 0.9
NME3-204ENST00000563498 ORC3Q9UBD5 711 aaPredicted RBP20.7■□□□□ 0.9
NME3-204ENST00000563498 PARP2Q9UGN5 583 aa20.7■□□□□ 0.9
NME3-204ENST00000563498 ZNF292O60281 2723 aa20.7■□□□□ 0.9
NME3-204ENST00000563498 HNRNPA1P09651 372 aaKnown RBP eCLIP20.69■□□□□ 0.9
NME3-204ENST00000563498 RPL17P18621 184 aaKnown RBP20.69■□□□□ 0.9
NME3-204ENST00000563498 RTP2Q5QGT7 225 aa20.69■□□□□ 0.9
NME3-204ENST00000563498 CDR2LQ86X02 465 aaPredicted RBP20.69■□□□□ 0.9
NME3-204ENST00000563498 GLYCTKQ8IVS8 523 aa20.69■□□□□ 0.9
NME3-204ENST00000563498 PRMT7Q9NVM4 692 aaPredicted RBP20.69■□□□□ 0.9
NME3-204ENST00000563498 KLK14Q9P0G3 267 aa20.69■□□□□ 0.9
NME3-204ENST00000563498 DLGAP2Q9P1A6 1054 aa20.69■□□□□ 0.9
NME3-204ENST00000563498 FBXW11Q9UKB1 542 aa20.69■□□□□ 0.9
NME3-204ENST00000563498 SIT1Q9Y3P8 196 aa20.69■□□□□ 0.9
NME3-204ENST00000563498 NUMBLQ9Y6R0 609 aa20.69■□□□□ 0.9
NME3-204ENST00000563498 DCHS1Q96JQ0 3298 aa20.68■□□□□ 0.9
NME3-204ENST00000563498 FSHRP23945 695 aa20.68■□□□□ 0.9
NME3-204ENST00000563498 CDCA2Q69YH5 1023 aaPredicted RBP20.68■□□□□ 0.9
NME3-204ENST00000563498 DCLRE1AQ6PJP8 1040 aa20.68■□□□□ 0.9
NME3-204ENST00000563498 PRSS55Q6UWB4 352 aaPredicted RBP20.68■□□□□ 0.9
NME3-204ENST00000563498 PIGOQ8TEQ8 1089 aa20.68■□□□□ 0.9
NME3-204ENST00000563498 PIK3R5Q8WYR1 880 aa20.68■□□□□ 0.9
NME3-204ENST00000563498 TTPALQ9BTX7 342 aa20.68■□□□□ 0.9
NME3-204ENST00000563498 FDPSP14324 419 aaKnown RBP20.67■□□□□ 0.9
NME3-204ENST00000563498 HOXA9P31269 272 aa20.67■□□□□ 0.9
NME3-204ENST00000563498 ANKRD1Q15327 319 aa20.67■□□□□ 0.9
NME3-204ENST00000563498 FAM187BQ17R55 369 aa20.67■□□□□ 0.9
NME3-204ENST00000563498 LIN9Q5TKA1 542 aa20.67■□□□□ 0.9
NME3-204ENST00000563498 PDXDC1Q6P996 788 aa20.67■□□□□ 0.9
NME3-204ENST00000563498 ZC3H14Q6PJT7 736 aaKnown RBP20.67■□□□□ 0.9
NME3-204ENST00000563498 MCPH1Q8NEM0 835 aa20.67■□□□□ 0.9
NME3-204ENST00000563498 KCNG4Q8TDN1 519 aa20.67■□□□□ 0.9
NME3-204ENST00000563498 RABGGTAQ92696 567 aa20.67■□□□□ 0.9
NME3-204ENST00000563498 SHDQ96IW2 340 aa20.67■□□□□ 0.9
NME3-204ENST00000563498 MTMR9Q96QG7 549 aa20.67■□□□□ 0.9
NME3-204ENST00000563498 CLSTN3Q9BQT9 956 aa20.67■□□□□ 0.9
NME3-204ENST00000563498 PAAF1Q9BRP4 392 aa20.67■□□□□ 0.9
NME3-204ENST00000563498 FZD8Q9H461 694 aa20.67■□□□□ 0.9
NME3-204ENST00000563498 DAXXQ9UER7 740 aaPredicted RBP20.67■□□□□ 0.9
NME3-204ENST00000563498 CDH7Q9ULB5 785 aa20.67■□□□□ 0.9
NME3-204ENST00000563498 LRRIQ4A6NIV6 560 aa20.66■□□□□ 0.9
NME3-204ENST00000563498 NEMFO60524 1076 aa20.66■□□□□ 0.9
NME3-204ENST00000563498 USO1O60763 962 aaKnown RBP20.66■□□□□ 0.9
NME3-204ENST00000563498 DCNP07585 359 aaKnown RBP20.66■□□□□ 0.9
NME3-204ENST00000563498 POU2F2P09086 479 aa20.66■□□□□ 0.9
NME3-204ENST00000563498 TXKP42681 527 aa20.66■□□□□ 0.9
NME3-204ENST00000563498 STARD6P59095 220 aa20.66■□□□□ 0.9
NME3-204ENST00000563498 ELAVL2Q12926 359 aaKnown RBP20.66■□□□□ 0.9
NME3-204ENST00000563498 SPECC1Q5M775 1068 aa20.66■□□□□ 0.9
NME3-204ENST00000563498 FAM171A1Q5VUB5 890 aa20.66■□□□□ 0.9
NME3-204ENST00000563498 C1orf210Q8IVY1 113 aa20.66■□□□□ 0.9
NME3-204ENST00000563498 ZBTB8OSQ8IWT0 167 aa20.66■□□□□ 0.9
NME3-204ENST00000563498 LNX1Q8TBB1 728 aaPredicted RBP20.66■□□□□ 0.9
NME3-204ENST00000563498 CACNA1AO00555 2505 aa20.66■□□□□ 0.9
NME3-204ENST00000563498 PTGESO14684 152 aa20.65■□□□□ 0.9
NME3-204ENST00000563498 N4BP3O15049 544 aa20.65■□□□□ 0.9
NME3-204ENST00000563498 DTNBO60941 627 aa20.65■□□□□ 0.9
NME3-204ENST00000563498 KIF4AO95239 1232 aa20.65■□□□□ 0.9
NME3-204ENST00000563498 THP07101 528 aa20.65■□□□□ 0.9
NME3-204ENST00000563498 PSMD5Q16401 504 aa20.65■□□□□ 0.9
NME3-204ENST00000563498 PPM1LQ5SGD2 360 aa20.65■□□□□ 0.9
NME3-204ENST00000563498 GRASPQ7Z6J2 395 aaPredicted RBP20.65■□□□□ 0.9
NME3-204ENST00000563498 PJA1Q8NG27 643 aa20.65■□□□□ 0.9
NME3-204ENST00000563498 FGF14Q92915 247 aa20.65■□□□□ 0.9
NME3-204ENST00000563498 C2orf40Q9H1Z8 148 aa20.65■□□□□ 0.9
NME3-204ENST00000563498 GPRC5CQ9NQ84 441 aa20.65■□□□□ 0.9
NME3-204ENST00000563498 CACNG4Q9UBN1 327 aa20.65■□□□□ 0.9
NME3-204ENST00000563498 R4GN57 208 aa20.65■□□□□ 0.9
NME3-204ENST00000563498 CASTOR2A6NHX0 329 aa20.64■□□□□ 0.89
NME3-204ENST00000563498 XYLBO75191 536 aa20.64■□□□□ 0.89
NME3-204ENST00000563498 C8AP07357 584 aa20.64■□□□□ 0.89
NME3-204ENST00000563498 SP9P0CG40 484 aa20.64■□□□□ 0.89
NME3-204ENST00000563498 SPATA31C1P0DKV0 1188 aa20.64■□□□□ 0.89
NME3-204ENST00000563498 NAB2Q15742 525 aa20.64■□□□□ 0.89
NME3-204ENST00000563498 PARM1Q6UWI2 310 aa20.64■□□□□ 0.89
NME3-204ENST00000563498 MTSS1LQ765P7 747 aa20.64■□□□□ 0.89
NME3-204ENST00000563498 RPP25Q9BUL9 199 aaKnown RBP20.64■□□□□ 0.89
NME3-204ENST00000563498 PDZD7Q9H5P4 517 aa20.64■□□□□ 0.89
NME3-204ENST00000563498 TUFT1Q9NNX1 390 aa20.64■□□□□ 0.89
NME3-204ENST00000563498 WDR87Q6ZQQ6 2873 aa20.64■□□□□ 0.89
NME3-204ENST00000563498 EP300Q09472 2414 aaPredicted RBP20.64■□□□□ 0.89
NME3-204ENST00000563498 POTEMA6NI47 508 aa20.63■□□□□ 0.89
NME3-204ENST00000563498 BTBD18B2RXH4 712 aa20.63■□□□□ 0.89
NME3-204ENST00000563498 RECQL4O94761 1208 aa20.63■□□□□ 0.89
NME3-204ENST00000563498 ANAPC15P60006 121 aa20.63■□□□□ 0.89
NME3-204ENST00000563498 GPC5P78333 572 aa20.63■□□□□ 0.89
NME3-204ENST00000563498 UVSSAQ2YD98 709 aa20.63■□□□□ 0.89
NME3-204ENST00000563498 RTL10Q7L3V2 364 aa20.63■□□□□ 0.89
NME3-204ENST00000563498 MAEAQ7L5Y9 396 aa20.63■□□□□ 0.89
NME3-204ENST00000563498 CEP57Q86XR8 500 aa20.63■□□□□ 0.89
NME3-204ENST00000563498 HASPINQ8TF76 798 aa20.63■□□□□ 0.89
NME3-204ENST00000563498 FGF13Q92913 245 aa20.63■□□□□ 0.89
NME3-204ENST00000563498 DDX23Q9BUQ8 820 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms