RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 LIMCH1Q9UPQ0 1083 aa5.85□□□□□ -1.47
VPS35P1-201ENST00000563400 HIF3AQ9Y2N7 669 aa5.85□□□□□ -1.47
VPS35P1-201ENST00000563400 KNDC1Q76NI1 1749 aa5.85□□□□□ -1.47
VPS35P1-201ENST00000563400 PTPRUQ92729 1446 aa5.85□□□□□ -1.47
VPS35P1-201ENST00000563400 CDC42BPGQ6DT37 1551 aa5.85□□□□□ -1.47
VPS35P1-201ENST00000563400 NSD2O96028 1365 aa5.85□□□□□ -1.47
VPS35P1-201ENST00000563400 PLA2G6O60733 806 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 AOC2O75106 756 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 DEAF1O75398 565 aaPredicted RBP5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 URI1O94763 535 aaPredicted RBP5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 MYCLP12524 364 aaPredicted RBP5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 LCP1P13796 627 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 NOP2P46087 812 aaKnown RBP5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 HSD17B7P56937 341 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 CREMQ03060 361 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 RING1Q06587 406 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 SCRN1Q12765 414 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 DCTN1Q14203 1278 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 PDE3AQ14432 1141 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 PTPN14Q15678 1187 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 NKG7Q16617 165 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 ARL13BQ3SXY8 428 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 PPM1JQ5JR12 505 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 FBXO47Q5MNV8 452 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 GALNTL5Q7Z4T8 443 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 KLHDC4Q8TBB5 520 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 ZDHHC15Q96MV8 337 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 JAKMIP1Q96N16 626 aaKnown RBP5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 ADPGKQ9BRR6 497 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 SIL1Q9H173 461 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 SEMA6BQ9H3T3 888 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 ZMAT3Q9HA38 289 aaKnown RBP5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 TPSG1Q9NRR2 321 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 ABCF3Q9NUQ8 709 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 HAUS2Q9NVX0 235 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 SEL1LQ9UBV2 794 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 NUDCQ9Y266 331 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 SIK3Q9Y2K2 1263 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 CEP83Q9Y592 693 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 SPO11Q9Y5K1 396 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 TULP4Q9NRJ4 1543 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 PPIP5K1Q6PFW1 1433 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 ADGRB1O14514 1584 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 SOS1Q07889 1333 aaPredicted RBP5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 TRPM1Q7Z4N2 1603 aa5.84□□□□□ -1.47
VPS35P1-201ENST00000563400 F5H0A9 414 aaPredicted RBP5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 H7C1D1 291 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 LINC01387J3KSC0 135 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 STARD3NLO95772 234 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 PARP1P09874 1014 aaKnown RBP5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 CLEC2LP0C7M8 214 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 EDNRBP24530 442 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 PTX3P26022 381 aaPredicted RBP5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 CDC25BP30305 580 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 HPDP32754 393 aaPredicted RBP5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 SERPINF1P36955 418 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 ARL4DP49703 201 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 LRP8Q14114 963 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 CT83Q5H943 113 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 NOL9Q5SY16 702 aaKnown RBP5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 NBPF12Q5TAG4 269 aaPredicted RBP5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 FSTL4Q6MZW2 842 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 SLC30A6Q6NXT4 461 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 CPLX2Q6PUV4 134 aaKnown RBP5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 UNC5DQ6UXZ4 953 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 LBX2Q6XYB7 198 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 MCM10Q7L590 875 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 OTOP1Q7RTM1 612 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 KCNK18Q7Z418 384 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 KDELC2Q7Z4H8 507 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 PLD6Q8N2A8 252 aaKnown RBP5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 FIBCD1Q8N539 461 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 KLHL23Q8NBE8 558 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 TDRD7Q8NHU6 1098 aaKnown RBP5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 WFDC12Q8WWY7 111 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 STON2Q8WXE9 905 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 HERVK_113Q902F9 699 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 WNT8BQ93098 351 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 GPATCH1Q9BRR8 931 aaKnown RBP5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 AGXT2Q9BYV1 514 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 TXLNGYQ9BZA5 131 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 KIAA1683Q9H0B3 1180 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 DHX36Q9H2U1 1008 aaKnown RBP5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 AKTIPQ9H8T0 292 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 IPPKQ9H8X2 491 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 ARMT1Q9H993 441 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 JMJD4Q9H9V9 463 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 PREBQ9HCU5 417 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 DENND2AQ9ULE3 1009 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 PCDHGB5Q9Y5G0 923 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 NR2E3Q9Y5X4 410 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 NPFFR2Q9Y5X5 522 aa5.84□□□□□ -1.48
VPS35P1-201ENST00000563400 XRN1Q8IZH2 1706 aaKnown RBP5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 SPATA31A3Q5VYP0 1347 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 ATP7BP35670 1465 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 ANKRD36BQ8N2N9 1353 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 KIF1AQ12756 1690 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 C17orf113A0A1B0GUU1 675 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 RBAK-RBAKDNI3L0D1 243 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms