RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 PALD1Q9ULE6 856 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 PCDHA9Q9Y5H5 950 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 PPP2R3BQ9Y5P8 575 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 TTC28Q96AY4 2481 aa6.81□□□□□ -1.32
UBR1-203ENST00000562173 RPTORQ8N122 1335 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 SGSM2O43147 1006 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 CETPP11597 493 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 POU3F2P20265 443 aaPredicted RBP6.8□□□□□ -1.32
UBR1-203ENST00000562173 CCND3P30281 292 aaPredicted RBP6.8□□□□□ -1.32
UBR1-203ENST00000562173 GPR19Q15760 415 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 CCL14Q16627 93 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 TM4SF20Q53R12 229 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 ZCCHC8Q6NZY4 707 aaKnown RBP6.8□□□□□ -1.32
UBR1-203ENST00000562173 LMBR1LQ6UX01 489 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 GADL1Q6ZQY3 521 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 FGD2Q7Z6J4 655 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 ANKRD13CQ8N6S4 541 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 TRIB2Q92519 343 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 ALG3Q92685 438 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 CLUHP3Q96NS8 147 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 MPHOSPH8Q99549 860 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 HTATIP2Q9BUP3 242 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 MYOTQ9UBF9 498 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 PRKAB1Q9Y478 270 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 NR2E3Q9Y5X4 410 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 ATRNL1Q5VV63 1379 aa6.8□□□□□ -1.32
UBR1-203ENST00000562173 FAM205AQ6ZU69 1335 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 CCDC66A2RUB6 948 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 SMARCA5O60264 1052 aaPredicted RBP6.79□□□□□ -1.32
UBR1-203ENST00000562173 TSPAN15O95858 294 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 PFKLP17858 780 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 ZNF200P98182 395 aaPredicted RBP6.79□□□□□ -1.32
UBR1-203ENST00000562173 SNAPC2Q13487 334 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 KIF22Q14807 665 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 ANKRD23Q86SG2 305 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 FAM126BQ8IXS8 530 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 TDHQ8IZJ6 230 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 PPM1KQ8N3J5 372 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 PIP4K2CQ8TBX8 421 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 SUCLG2Q96I99 432 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 SLC38A3Q99624 504 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 CDX2Q99626 313 aaPredicted RBP6.79□□□□□ -1.32
UBR1-203ENST00000562173 ORAI3Q9BRQ5 295 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 JAM3Q9BX67 310 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 PCDH18Q9HCL0 1135 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 DDX4Q9NQI0 724 aaKnown RBP6.79□□□□□ -1.32
UBR1-203ENST00000562173 ASH2LQ9UBL3 628 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 SRPK3Q9UPE1 567 aa6.79□□□□□ -1.32
UBR1-203ENST00000562173 ZNFX1Q9P2E3 1918 aaKnown RBP6.79□□□□□ -1.32
UBR1-203ENST00000562173 CACNA1FO60840 1977 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 CLSPNQ9HAW4 1339 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 ANKRD18BA2A2Z9 1011 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 ZNF561-AS1K7EIQ3 104 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 N4BP3O15049 544 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 OPA1O60313 960 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 CKMP06732 381 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 EPHA5P54756 1037 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 EPHB4P54760 987 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 CRY1Q16526 586 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 ANO1Q5XXA6 986 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 EGFLAMQ63HQ2 1017 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 FAM109BQ6ICB4 259 aaPredicted RBP6.78□□□□□ -1.32
UBR1-203ENST00000562173 CDC42EP5Q6NZY7 148 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 ETV3LQ6ZN32 361 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 C15orf52Q6ZUT6 534 aaKnown RBP6.78□□□□□ -1.32
UBR1-203ENST00000562173 ZNF804AQ7Z570 1209 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 NLGN4XQ8N0W4 816 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 RUNDC1Q96C34 613 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 KCNJ15Q99712 375 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 PLA2G12BQ9BX93 195 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 ANKRD2Q9GZV1 360 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 CNTD2Q9H8S5 307 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 BABAM1Q9NWV8 329 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 HSPBP1Q9NZL4 362 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 DSEQ9UL01 958 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 PCDHA5Q9Y5H7 936 aa6.78□□□□□ -1.32
UBR1-203ENST00000562173 TNPO3Q9Y5L0 923 aaKnown RBP6.78□□□□□ -1.32
UBR1-203ENST00000562173 TCRBV5S2A0A599 114 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 DDTLA6NHG4 134 aaPredicted RBP6.77□□□□□ -1.33
UBR1-203ENST00000562173 TRIM75PA6NK02 468 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 TNPO2O14787 897 aaKnown RBP6.77□□□□□ -1.33
UBR1-203ENST00000562173 ASGR2P07307 311 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 HOXB7P09629 217 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 NCAM1P13591 858 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 CYP2B6P20813 491 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 ITGB8P26012 769 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 PRDX5P30044 214 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 GJA4P35212 333 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 CDR1P51861 262 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 UBXN2AP68543 259 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 DLG4P78352 724 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 SHHQ15465 462 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 LRIT3Q3SXY7 679 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 TMEM177Q53S58 311 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 HHIPL2Q6UWX4 724 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 KCTD1Q719H9 257 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 MILR1Q7Z6M3 343 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 LRRTM3Q86VH5 581 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 ZC3H18Q86VM9 953 aaKnown RBP6.77□□□□□ -1.33
UBR1-203ENST00000562173 MAFAQ8NHW3 353 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms