RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 VAT1LQ9HCJ6 419 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 ERAP1Q9NZ08 941 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 RTEL1Q9NZ71 1219 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.1□□□□□ -1.43
HERC1-213ENST00000561359 MKL2Q9ULH7 1088 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 ST3GAL5Q9UNP4 418 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 NOC2LQ9Y3T9 749 aaKnown RBP6.1□□□□□ -1.43
HERC1-213ENST00000561359 IRAK3Q9Y616 596 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 LAMA5O15230 3695 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 LAMA1P25391 3075 aa6.1□□□□□ -1.43
HERC1-213ENST00000561359 KAT6AQ92794 2004 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 KDM3AQ9Y4C1 1321 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 ANHXE9PGG2 379 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 INPPL1O15357 1258 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 EFSO43281 561 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 FIBPO43427 364 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 ZC3H11AO75152 810 aaKnown RBP eCLIP6.09□□□□□ -1.43
HERC1-213ENST00000561359 SSBP05455 408 aaKnown RBP eCLIP6.09□□□□□ -1.43
HERC1-213ENST00000561359 ZFYP08048 801 aaPredicted RBP6.09□□□□□ -1.43
HERC1-213ENST00000561359 SNHG28P0DPA3 235 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 MYBP10242 640 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 EPXP11678 715 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 INSRRP14616 1297 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 TARSP26639 723 aaKnown RBP6.09□□□□□ -1.43
HERC1-213ENST00000561359 RPS9P46781 194 aaKnown RBP6.09□□□□□ -1.43
HERC1-213ENST00000561359 CLCN4P51793 760 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 POLGP54098 1239 aaPredicted RBP6.09□□□□□ -1.43
HERC1-213ENST00000561359 SNRPNP63162 240 aaKnown RBP6.09□□□□□ -1.43
HERC1-213ENST00000561359 FAM189BP81408 668 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 ZNF252P-AS1Q0IIN9 211 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 WTAPQ15007 396 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 CCDC6Q16204 474 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 ELMSAN1Q6PJG2 1045 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 C19orf48Q6RUI8 117 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 RSPO2Q6UXX9 243 aaPredicted RBP6.09□□□□□ -1.43
HERC1-213ENST00000561359 FAM43BQ6ZT52 329 aaPredicted RBP6.09□□□□□ -1.43
HERC1-213ENST00000561359 DDX53Q86TM3 631 aaKnown RBP6.09□□□□□ -1.43
HERC1-213ENST00000561359 PDZD3Q86UT5 571 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 FTSJ3Q8IY81 847 aaKnown RBP6.09□□□□□ -1.43
HERC1-213ENST00000561359 TRMT2AQ8IZ69 625 aaKnown RBP6.09□□□□□ -1.43
HERC1-213ENST00000561359 ALDH16A1Q8IZ83 802 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 NME8Q8N427 588 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 KBTBD3Q8NAB2 608 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 CMASQ8NFW8 434 aaPredicted RBP6.09□□□□□ -1.43
HERC1-213ENST00000561359 SEPT1Q8WYJ6 367 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 PHKBQ93100 1093 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 CLDN23Q96B33 292 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 HSH2DQ96JZ2 352 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 NELL2Q99435 816 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 RPP25Q9BUL9 199 aaKnown RBP6.09□□□□□ -1.43
HERC1-213ENST00000561359 SCNM1Q9BWG6 230 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 SMARCAD1Q9H4L7 1026 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 PIDD1Q9HB75 910 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 MAN1C1Q9NR34 630 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 RXFP3Q9NSD7 469 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 IGSF5Q9NSI5 407 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 RNF19AQ9NV58 838 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 PCDHA2Q9Y5H9 948 aa6.09□□□□□ -1.43
HERC1-213ENST00000561359 FNDC1Q4ZHG4 1894 aaPredicted RBP6.09□□□□□ -1.44
HERC1-213ENST00000561359 SPTA1P02549 2419 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 GCOM1H8Y6P7 765 aaPredicted RBP6.08□□□□□ -1.44
HERC1-213ENST00000561359 OPLAHO14841 1288 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 GIPC1O14908 333 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 ORC4O43929 436 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 STAM2O75886 525 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 TOP3BO95985 862 aaKnown RBP6.08□□□□□ -1.44
HERC1-213ENST00000561359 CNPP09543 421 aaKnown RBP6.08□□□□□ -1.44
HERC1-213ENST00000561359 POLR2MP0CAP2 368 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 MRPS9P82933 396 aaKnown RBP6.08□□□□□ -1.44
HERC1-213ENST00000561359 PFKPQ01813 784 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 ADCY1Q08828 1119 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 SRSF5Q13243 272 aaKnown RBP6.08□□□□□ -1.44
HERC1-213ENST00000561359 HIF1AQ16665 826 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 ZNF468Q5VIY5 522 aaPredicted RBP6.08□□□□□ -1.44
HERC1-213ENST00000561359 ZKSCAN2Q63HK3 967 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 PARM1Q6UWI2 310 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 CYP26C1Q6V0L0 522 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 ZNF852Q6ZMS4 543 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 TPRG1Q6ZUI0 275 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 CEP68Q76N32 757 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 TMEM173Q86WV6 379 aaPredicted RBP6.08□□□□□ -1.44
HERC1-213ENST00000561359 LURAP1LQ8IV03 231 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 HELQQ8TDG4 1101 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 TRAPPC12Q8WVT3 735 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 TMEM40Q8WWA1 233 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 FGF14Q92915 247 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 TNPO1Q92973 898 aaKnown RBP6.08□□□□□ -1.44
HERC1-213ENST00000561359 IGSF21Q96ID5 467 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 BTBD6Q96KE9 485 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 INPP4AQ96PE3 977 aaPredicted RBP6.08□□□□□ -1.44
HERC1-213ENST00000561359 PPP1R16BQ96T49 567 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 SEC62Q99442 399 aaKnown RBP6.08□□□□□ -1.44
HERC1-213ENST00000561359 SENP7Q9BQF6 1050 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 C2orf49Q9BVC5 232 aaPredicted RBP6.08□□□□□ -1.44
HERC1-213ENST00000561359 AMNQ9BXJ7 453 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 MRPL9Q9BYD2 267 aaKnown RBP6.08□□□□□ -1.44
HERC1-213ENST00000561359 BRD7Q9NPI1 651 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 AVENQ9NQS1 362 aaPredicted RBP6.08□□□□□ -1.44
HERC1-213ENST00000561359 TCP11L1Q9NUJ3 509 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 MAP3K20Q9NYL2 800 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms