RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 SETD4Q9NVD3 440 aa18.54■□□□□ 0.56
HDDC3-206ENST00000561036 CNTNAP2Q9UHC6 1331 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 A0A087WZ62 844 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 SEPT4O43236 478 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 KRT86O43790 486 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 DLATP10515 647 aaKnown RBP18.53■□□□□ 0.56
HDDC3-206ENST00000561036 GNAT1P11488 350 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 GNG11P61952 73 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 PRKCZQ05513 592 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 DRAP1Q14919 205 aaPredicted RBP18.53■□□□□ 0.56
HDDC3-206ENST00000561036 C10orf76Q5T2E6 689 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 SMYD5Q6GMV2 418 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 GJB7Q6PEY0 223 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 SV2AQ7L0J3 742 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 ENOSF1Q7L5Y1 443 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 VPS36Q86VN1 386 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 ZNF592Q92610 1267 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 LENG1Q96BZ8 264 aaPredicted RBP18.53■□□□□ 0.56
HDDC3-206ENST00000561036 ZBTB10Q96DT7 871 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 POP1Q99575 1024 aaKnown RBP18.53■□□□□ 0.56
HDDC3-206ENST00000561036 FDXACB1Q9BRP7 624 aaPredicted RBP18.53■□□□□ 0.56
HDDC3-206ENST00000561036 SPC25Q9HBM1 224 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 RAB20Q9NX57 234 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 AJAP1Q9UKB5 411 aaPredicted RBP18.53■□□□□ 0.56
HDDC3-206ENST00000561036 PCDHA13Q9Y5I0 950 aa18.53■□□□□ 0.56
HDDC3-206ENST00000561036 EVPLQ92817 2033 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 ATP8B3O60423 1300 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 TTLL13PA6NNM8 815 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 ZNF263O14978 683 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 TBC1D8O95759 1140 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 GNRH1P01148 92 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 C4BPAP04003 597 aaKnown RBP18.52■□□□□ 0.56
HDDC3-206ENST00000561036 VTNP04004 478 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 MCF2P10911 925 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 ADAM17P78536 824 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 PURAQ00577 322 aaKnown RBP18.52■□□□□ 0.56
HDDC3-206ENST00000561036 SLC18A3Q16572 532 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 AMHR2Q16671 573 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 ZNF568Q3ZCX4 644 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 ZACNQ401N2 412 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 JAKMIP2Q96AA8 810 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 NT5C1BQ96P26 610 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 MTG1Q9BT17 334 aaPredicted RBP18.52■□□□□ 0.56
HDDC3-206ENST00000561036 IFIH1Q9BYX4 1025 aaKnown RBP18.52■□□□□ 0.56
HDDC3-206ENST00000561036 MINDY3Q9H8M7 445 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 UBE2TQ9NPD8 197 aaPredicted RBP18.52■□□□□ 0.56
HDDC3-206ENST00000561036 DNAI1Q9UI46 699 aa18.52■□□□□ 0.56
HDDC3-206ENST00000561036 CPSF3Q9UKF6 684 aaKnown RBP18.52■□□□□ 0.56
HDDC3-206ENST00000561036 PJA2O43164 708 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 TNNI1P19237 187 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 HOXC8P31273 242 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 MAGEA1P43355 309 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 MFAP3P55082 362 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 ARID5AQ03989 594 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 KIF5AQ12840 1032 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 TMEM132AQ24JP5 1023 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 ZBTB33Q86T24 672 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 WDR49Q8IV35 697 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 TAS1R2Q8TE23 839 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 NLRP7Q8WX94 980 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 ZNF516Q92618 1163 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 SEMA4DQ92854 862 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 GPR88Q9GZN0 384 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 ADAMTS10Q9H324 1103 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 PDE11AQ9HCR9 933 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 TOPORSQ9NS56 1045 aaPredicted RBP18.51■□□□□ 0.55
HDDC3-206ENST00000561036 RNF186Q9NXI6 227 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 SRRDQ9UH36 339 aa18.51■□□□□ 0.55
HDDC3-206ENST00000561036 KAT6AQ92794 2004 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 EVI5O60447 810 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 IL18RAPO95256 599 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 RARBP10826 455 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 CYP2C9P11712 490 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 CASQ1P31415 396 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 BEX3Q00994 111 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 CYP27A1Q02318 531 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 GCNT1Q02742 428 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 PTK2Q05397 1052 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 ZBTB41Q5SVQ8 909 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 CCDC122Q5T0U0 273 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 APBB1IPQ7Z5R6 666 aaPredicted RBP18.5■□□□□ 0.55
HDDC3-206ENST00000561036 ARHGEF19Q8IW93 802 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 NME8Q8N427 588 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 SCLT1Q96NL6 688 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 GCOM2Q9BZD3 368 aaPredicted RBP18.5■□□□□ 0.55
HDDC3-206ENST00000561036 CDT1Q9H211 546 aa18.5■□□□□ 0.55
HDDC3-206ENST00000561036 C17orf102A2RUQ5 167 aa18.49■□□□□ 0.55
HDDC3-206ENST00000561036 B4GALT5O43286 388 aa18.49■□□□□ 0.55
HDDC3-206ENST00000561036 CLTAP09496 248 aa18.49■□□□□ 0.55
HDDC3-206ENST00000561036 C6orf222P0C671 652 aaPredicted RBP18.49■□□□□ 0.55
HDDC3-206ENST00000561036 IQCF3P0C7M6 154 aa18.49■□□□□ 0.55
HDDC3-206ENST00000561036 HARSP12081 509 aaKnown RBP18.49■□□□□ 0.55
HDDC3-206ENST00000561036 GFPT1Q06210 699 aaPredicted RBP18.49■□□□□ 0.55
HDDC3-206ENST00000561036 CACNB2Q08289 660 aaPredicted RBP18.49■□□□□ 0.55
HDDC3-206ENST00000561036 BMS1Q14692 1282 aaKnown RBP18.49■□□□□ 0.55
HDDC3-206ENST00000561036 WDR44Q5JSH3 913 aa18.49■□□□□ 0.55
HDDC3-206ENST00000561036 ZNF571Q7Z3V5 609 aaPredicted RBP18.49■□□□□ 0.55
HDDC3-206ENST00000561036 ZNF668Q96K58 619 aaPredicted RBP18.49■□□□□ 0.55
HDDC3-206ENST00000561036 A0A0U1RQJ8 604 aa18.48■□□□□ 0.55
HDDC3-206ENST00000561036 FOXN3O00409 490 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms