RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 WDR64B1ANS9 1081 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 EML1O00423 815 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 CLASP2O75122 1294 aaKnown RBP6.53□□□□□ -1.36
USP3-215ENST00000559771 TDP2O95551 362 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 PDGFBP01127 241 aaPredicted RBP6.53□□□□□ -1.36
USP3-215ENST00000559771 CYP3A7P24462 503 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 GNA11P29992 359 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 TECP42680 631 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 USP11P51784 963 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 CCT2P78371 535 aaKnown RBP6.53□□□□□ -1.36
USP3-215ENST00000559771 SIGLEC14Q08ET2 396 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 Q4G0T1 1027 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 ODR4Q5SWX8 454 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 SPOUT1Q5T280 376 aaKnown RBP6.53□□□□□ -1.36
USP3-215ENST00000559771 MCTP2Q6DN12 878 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 PDE12Q6L8Q7 609 aaKnown RBP6.53□□□□□ -1.36
USP3-215ENST00000559771 LLGL2Q6P1M3 1020 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 BLOC1S2Q6QNY1 142 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 ANO5Q75V66 913 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 KSR1Q8IVT5 923 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 LRRC43Q8N309 656 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 MRPL43Q8N983 215 aaKnown RBP6.53□□□□□ -1.36
USP3-215ENST00000559771 HELQQ8TDG4 1101 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 TBCKQ8TEA7 893 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 PPP2R3CQ969Q6 453 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 PBXIP1Q96AQ6 731 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 FAM167AQ96KS9 214 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 ZNF558Q96NG5 402 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 ANP32EQ9BTT0 268 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 TRAIPQ9BWF2 469 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 SLC26A6Q9BXS9 759 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 SMOC2Q9H3U7 446 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 WRAP73Q9P2S5 460 aaPredicted RBP6.53□□□□□ -1.36
USP3-215ENST00000559771 NAP1L2Q9ULW6 460 aaPredicted RBP6.53□□□□□ -1.36
USP3-215ENST00000559771 CEP131Q9UPN4 1083 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 AKT3Q9Y243 479 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 HCFC2Q9Y5Z7 792 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 CFAP54Q96N23 3096 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 VPS13AQ96RL7 3174 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 C2orf16Q68DN1 1984 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 A0A087WZ62 844 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 CCDC196A0A1B0GTZ2 297 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 NT5C1B-RDH14C9J2C7 533 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 CHMP2AO43633 222 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 SLC37A4O43826 429 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 GAS7O60861 476 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 DTNBO60941 627 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 EOMESO95936 686 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 WEE2P0C1S8 567 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 SP100P23497 879 aaPredicted RBP6.52□□□□□ -1.37
USP3-215ENST00000559771 SFNP31947 248 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 PHKA2P46019 1235 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 AFF1P51825 1210 aaKnown RBP6.52□□□□□ -1.37
USP3-215ENST00000559771 BCAR1P56945 870 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 LBRQ14739 615 aaKnown RBP6.52□□□□□ -1.37
USP3-215ENST00000559771 PTPN21Q16825 1174 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 LRCH2Q5VUJ6 765 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 FBXL6Q8N531 539 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 C12orf76Q8N812 135 aaPredicted RBP6.52□□□□□ -1.37
USP3-215ENST00000559771 RNF169Q8NCN4 708 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 ADAM32Q8TC27 787 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 CCDC12Q8WUD4 166 aaPredicted RBP6.52□□□□□ -1.37
USP3-215ENST00000559771 SLC22A17Q8WUG5 538 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 AUTS2Q8WXX7 1259 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 LPPQ93052 612 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 MAP7D2Q96T17 732 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 FDXACB1Q9BRP7 624 aaPredicted RBP6.52□□□□□ -1.37
USP3-215ENST00000559771 ZBP1Q9H171 429 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 ADAM7Q9H2U9 754 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 POMKQ9H5K3 350 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 RUBCNLQ9H714 662 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 NRDE2Q9H7Z3 1164 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 IFT122Q9HBG6 1241 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 NGRNQ9NPE2 291 aaKnown RBP6.52□□□□□ -1.37
USP3-215ENST00000559771 ENTPD7Q9NQZ7 604 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 SH3GLB2Q9NR46 395 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 NRBP2Q9NSY0 501 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 SPG21Q9NZD8 308 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 VAV3Q9UKW4 847 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 PCDHA4Q9UN74 947 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 SAMM50Q9Y512 469 aa6.52□□□□□ -1.37
USP3-215ENST00000559771 MYO10Q9HD67 2058 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 KRTAP9-7A8MTY7 169 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 C2CD4DB7Z1M9 353 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 ZNF623O75123 536 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 MAFO75444 373 aaPredicted RBP6.51□□□□□ -1.37
USP3-215ENST00000559771 OFD1O75665 1012 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 DDHD2O94830 711 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 BRD1O95696 1058 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 EFEMP2O95967 443 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 EPCAMP16422 314 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 ZSCAN20P17040 1043 aaPredicted RBP6.51□□□□□ -1.37
USP3-215ENST00000559771 HOXB8P17481 243 aaPredicted RBP6.51□□□□□ -1.37
USP3-215ENST00000559771 TMOD1P28289 359 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 AVPR2P30518 371 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 HOXA11P31270 313 aaPredicted RBP6.51□□□□□ -1.37
USP3-215ENST00000559771 PPM1AP35813 382 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 IRAK1P51617 712 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 JAK3P52333 1124 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 NPEPPSP55786 919 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms