RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 SMARCE1Q969G3 411 aa9.9□□□□□ -0.82
HMG20A-209ENST00000559728 CASD1Q96PB1 797 aa9.9□□□□□ -0.82
HMG20A-209ENST00000559728 CBWD1Q9BRT8 395 aa9.9□□□□□ -0.82
HMG20A-209ENST00000559728 PBX4Q9BYU1 374 aa9.9□□□□□ -0.82
HMG20A-209ENST00000559728 SEMA6BQ9H3T3 888 aa9.9□□□□□ -0.82
HMG20A-209ENST00000559728 AGPAT3Q9NRZ7 376 aa9.9□□□□□ -0.82
HMG20A-209ENST00000559728 MIOSQ9NXC5 875 aa9.9□□□□□ -0.82
HMG20A-209ENST00000559728 HCSTQ9UBK5 93 aa9.9□□□□□ -0.82
HMG20A-209ENST00000559728 MAPK8IP1Q9UQF2 711 aa9.9□□□□□ -0.82
HMG20A-209ENST00000559728 LOXHD1Q8IVV2 1947 aa9.9□□□□□ -0.83
HMG20A-209ENST00000559728 UBE4BO95155 1302 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.89□□□□□ -0.83
HMG20A-209ENST00000559728 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.89□□□□□ -0.83
HMG20A-209ENST00000559728 PPP1R3GB7ZBB8 358 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 BIN1O00499 593 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 PTGESO14684 152 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 HNRNPDLO14979 420 aaKnown RBP9.89□□□□□ -0.83
HMG20A-209ENST00000559728 UPP2O95045 317 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 SMC2O95347 1197 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 MBD3O95983 291 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 ADRB2P07550 413 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 AKAP5P24588 427 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 ABCD1P33897 745 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 TNFSF9P41273 254 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 GRM5P41594 1212 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 KCNJ6P48051 423 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 LIG4P49917 911 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 RAB27AP51159 221 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 NAB2Q15742 525 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 KNOP1Q1ED39 458 aaKnown RBP9.89□□□□□ -0.83
HMG20A-209ENST00000559728 ZNF568Q3ZCX4 644 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 C12orf56Q8IXR9 622 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 GUF1Q8N442 669 aaKnown RBP9.89□□□□□ -0.83
HMG20A-209ENST00000559728 TMEM174Q8WUU8 243 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 ZFP42Q96MM3 310 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 GZF1Q9H116 711 aaPredicted RBP9.89□□□□□ -0.83
HMG20A-209ENST00000559728 NUP62CLQ9H1M0 184 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 TMEM206Q9H813 350 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 DMAC2Q9NW81 257 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 SNTG2Q9NY99 539 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 ANKFY1Q9P2R3 1169 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 CPSF3Q9UKF6 684 aaKnown RBP9.89□□□□□ -0.83
HMG20A-209ENST00000559728 PLAGL2Q9UPG8 496 aa9.89□□□□□ -0.83
HMG20A-209ENST00000559728 CLDN3O15551 220 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 RECQL4O94761 1208 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 STAG3L1P0CL83 205 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 SKIP12755 728 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 GARTP22102 1010 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 SMAD3P84022 425 aaKnown RBP9.88□□□□□ -0.83
HMG20A-209ENST00000559728 NCBP1Q09161 790 aaKnown RBP9.88□□□□□ -0.83
HMG20A-209ENST00000559728 NOLC1Q14978 699 aaKnown RBP eCLIP9.88□□□□□ -0.83
HMG20A-209ENST00000559728 NFKBIBQ15653 356 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 KLHL40Q2TBA0 621 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 SLC10A6Q3KNW5 377 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 DCAF4L1Q3SXM0 396 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 LCE2DQ5TA82 110 aaPredicted RBP9.88□□□□□ -0.83
HMG20A-209ENST00000559728 TMEM130Q8N3G9 435 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 HELQQ8TDG4 1101 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 FBXL18Q96ME1 805 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 ZMAT2Q96NC0 199 aaKnown RBP9.88□□□□□ -0.83
HMG20A-209ENST00000559728 RAD9AQ99638 391 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 GBP3Q9H0R5 595 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 MTIF3Q9H2K0 278 aaKnown RBP9.88□□□□□ -0.83
HMG20A-209ENST00000559728 CWH43Q9H720 699 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 RMND1Q9NWS8 449 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 TRAF3IP3Q9Y228 551 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 PCDHB7Q9Y5E2 793 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 CHD7Q9P2D1 2997 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 PTPRSQ13332 1948 aa9.88□□□□□ -0.83
HMG20A-209ENST00000559728 TTC3P53804 2025 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 TTC26A0AVF1 554 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 LINC01553A4QN01 128 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 ARL5CA6NH57 179 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 PDXKO00764 312 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 CLIC2O15247 247 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 OGTO15294 1046 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 DDHD2O94830 711 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 CA3P07451 260 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 HARSP12081 509 aaKnown RBP9.87□□□□□ -0.83
HMG20A-209ENST00000559728 ITGA4P13612 1032 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 IBSPP21815 317 aaPredicted RBP9.87□□□□□ -0.83
HMG20A-209ENST00000559728 IGFBP6P24592 240 aaPredicted RBP9.87□□□□□ -0.83
HMG20A-209ENST00000559728 MLH1P40692 756 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 OSTNP61366 133 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 ENOX2Q16206 610 aaKnown RBP9.87□□□□□ -0.83
HMG20A-209ENST00000559728 SCARA3Q6AZY7 606 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 CENPPQ6IPU0 288 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 ZNF280BQ86YH2 543 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 SLC9A9Q8IVB4 645 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 ZC3H3Q8IXZ2 948 aaKnown RBP9.87□□□□□ -0.83
HMG20A-209ENST00000559728 THNSL1Q8IYQ7 743 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 TRIML1Q8N9V2 468 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 RNF169Q8NCN4 708 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 PLEKHO2Q8TD55 490 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 SAAL1Q96ER3 474 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 BICD1Q96G01 975 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 CCDC34Q96HJ3 373 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 LRCH3Q96II8 777 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 SNX27Q96L92 541 aa9.87□□□□□ -0.83
HMG20A-209ENST00000559728 GAD1Q99259 594 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms