RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 TRPV5Q9NQA5 729 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 RBM12Q9NTZ6 932 aaKnown RBP10.85□□□□□ -0.67
SMAD3-211ENST00000559460 SUCLA2Q9P2R7 463 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-211ENST00000559460 GPSM3Q9Y4H4 160 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 U3KPZ7 1027 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-211ENST00000559460 MTCL1Q9Y4B5 1905 aaKnown RBP10.84□□□□□ -0.67
SMAD3-211ENST00000559460 hCG_1642624A0A1W2PR95 340 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 ARL5CA6NH57 179 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 CCDC69A6NI79 296 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 SHISA7A6NL88 538 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 F8W810 466 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 ZNF197O14709 1029 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 DHX15O43143 795 aaKnown RBP10.84□□□□□ -0.67
SMAD3-211ENST00000559460 AKAP3O75969 853 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 RHOBTB1O94844 696 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 CAVIN2O95810 425 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 LRG1P02750 347 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 DSC1Q08554 894 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 DRP2Q13474 957 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 GAS6Q14393 721 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 UAP1L1Q3KQV9 507 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 RTL10Q7L3V2 364 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 CCDC82Q8N4S0 544 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 SRBD1Q8N5C6 995 aaKnown RBP10.84□□□□□ -0.67
SMAD3-211ENST00000559460 GLIS3Q8NEA6 775 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 GAD1Q99259 594 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 TTPALQ9BTX7 342 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 GLT8D2Q9H1C3 349 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 C8orf33Q9H7E9 229 aaPredicted RBP10.84□□□□□ -0.67
SMAD3-211ENST00000559460 RIC8AQ9NPQ8 531 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 SLC8A2Q9UPR5 921 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 IGF2RP11717 2491 aa10.84□□□□□ -0.67
SMAD3-211ENST00000559460 FAM86B1E9PN63 330 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 EFEMP2O95967 443 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 FAM86B2P0C5J1 330 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 CALM1P0DP23 149 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 CALM2P0DP24 149 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 CALM3P0DP25 149 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 CEBPBP17676 345 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 PTPN2P17706 415 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 RTP2Q5QGT7 225 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 PPP1R18Q6NYC8 613 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 CASC1Q6TDU7 716 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 Q6ZS52 159 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 CMTR1Q8N1G2 835 aaKnown RBP10.83□□□□□ -0.68
SMAD3-211ENST00000559460 PIK3R5Q8WYR1 880 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 DISC1Q9NRI5 854 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 KLK13Q9UKR3 277 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 IPPQ9Y573 584 aa10.83□□□□□ -0.68
SMAD3-211ENST00000559460 CCDC163A0A0D9SF12 145 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 SLC38A8A6NNN8 435 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 KHNYNO15037 678 aaKnown RBP10.82□□□□□ -0.68
SMAD3-211ENST00000559460 CHMP2AO43633 222 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 ZNF862O60290 1169 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 SFNP31947 248 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 ELF1P32519 619 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 PXNP49023 591 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-211ENST00000559460 JAK3P52333 1124 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 MLLT6P55198 1093 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-211ENST00000559460 ELAVL2Q12926 359 aaKnown RBP10.82□□□□□ -0.68
SMAD3-211ENST00000559460 HSP90AA2PQ14568 343 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-211ENST00000559460 KARSQ15046 597 aaKnown RBP10.82□□□□□ -0.68
SMAD3-211ENST00000559460 FAM78AQ5JUQ0 283 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 C20orf194Q5TEA3 1177 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 FAM171A1Q5VUB5 890 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 PDZD4Q76G19 769 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-211ENST00000559460 SRGAP1Q7Z6B7 1085 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 MAP4K3Q8IVH8 894 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 ELMOD1Q8N336 334 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 SYNPOQ8N3V7 929 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 DEFB124Q8NES8 71 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 HASPINQ8TF76 798 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 CLSTN3Q9BQT9 956 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 SLITRK6Q9H5Y7 841 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 GIT1Q9Y2X7 761 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 PCDHB15Q9Y5E8 787 aa10.82□□□□□ -0.68
SMAD3-211ENST00000559460 MYH9P35579 1960 aaKnown RBP10.82□□□□□ -0.68
SMAD3-211ENST00000559460 GCN1Q92616 2671 aaKnown RBP10.82□□□□□ -0.68
SMAD3-211ENST00000559460 LNP1A1A4G5 178 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 SMCO2A6NFE2 343 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 H0Y626 953 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 PRRG1O14668 218 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 ATG13O75143 517 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 TRIM16O95361 564 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 FCARP24071 287 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 GBP1P32455 592 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 OR1D2P34982 312 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 GRIK3Q13003 919 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 SLC5A9Q2M3M2 681 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 XKR3Q5GH77 459 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 CYP4A22Q5TCH4 519 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 NOTUMQ6P988 496 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 VITQ6UXI7 678 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 HAUS6Q7Z4H7 955 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 KSR1Q8IVT5 923 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 TMTC2Q8N394 836 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 ADAM32Q8TC27 787 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 RABGGTAQ92696 567 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 SMARCD2Q92925 531 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 E2F7Q96AV8 911 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms