RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 GUCY2CP25092 1073 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 MTHFRP42898 656 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 SMTNP53814 917 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 STRN3Q13033 797 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 TUSC3Q13454 348 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 SF3A1Q15459 793 aaKnown RBP13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 ATAT1Q5SQI0 421 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 KANK3Q6NY19 840 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 DAW1Q8N136 415 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 SYT2Q8N9I0 419 aaPredicted RBP13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 FBXL18Q96ME1 805 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 NECTIN4Q96NY8 510 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 CCDC94Q9BW85 323 aaPredicted RBP13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 MRPL4Q9BYD3 311 aaKnown RBP13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 TMEM134Q9H6X4 195 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 FOXD4L1Q9NU39 408 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 RAPGEFL1Q9UHV5 662 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 ADAM28Q9UKQ2 775 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 TNFSF13BQ9Y275 285 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 NR2E1Q9Y466 385 aa13.6□□□□□ -0.23
CDC42BPB-202ENST00000558321 MUC3AQ02505 3323 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 CASTOR2A6NHX0 329 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 ADH1AP07327 375 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 CLCN4P51793 760 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 YARSP54577 528 aaKnown RBP13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 MAPK7Q13164 816 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 DHX8Q14562 1220 aaKnown RBP13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 HSP90AA2PQ14568 343 aaPredicted RBP13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 USP41Q3LFD5 358 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 ZNF568Q3ZCX4 644 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 HERC4Q5GLZ8 1057 aaPredicted RBP13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 KIAA0319Q5VV43 1072 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 FUT10Q6P4F1 479 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 ELMSAN1Q6PJG2 1045 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 TMC5Q6UXY8 1006 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 ZBTB33Q86T24 672 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 ACO2Q99798 780 aaKnown RBP13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 TARS2Q9BW92 718 aaKnown RBP13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 GPR62Q9BZJ7 368 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 C11orf16Q9NQ32 467 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 KCND2Q9NZV8 630 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 CACNG4Q9UBN1 327 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 CDH22Q9UJ99 828 aa13.59□□□□□ -0.23
CDC42BPB-202ENST00000558321 NPHP3-ACAD11A0A0J9YXS1 232 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 PRR33A8MZF0 331 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 PTGESO14684 152 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 TEX28O15482 410 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 SLC26A4O43511 780 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 MYBP10242 640 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 HARSP12081 509 aaKnown RBP13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 PLS3P13797 630 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 LONP1P36776 959 aaKnown RBP13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 SLC12A3P55017 1021 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 OSTNP61366 133 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 DSG1Q02413 1049 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 TMEM119Q4V9L6 283 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 CEP57Q86XR8 500 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 PALB2Q86YC2 1186 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 GLYCTKQ8IVS8 523 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 HASPINQ8TF76 798 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 SPIRE2Q8WWL2 714 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 RIN2Q8WYP3 895 aaPredicted RBP13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 EDAQ92838 391 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 B3GALT6Q96L58 329 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 PAAF1Q9BRP4 392 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 NTPCRQ9BSD7 190 aaKnown RBP13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 POMKQ9H5K3 350 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 SFXN1Q9H9B4 322 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 TOPORSQ9NS56 1045 aaPredicted RBP13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 ARHGAP28Q9P2N2 729 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 DPP7Q9UHL4 492 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 HCN4Q9Y3Q4 1203 aa13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 SF3B1O75533 1304 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDC42BPB-202ENST00000558321 GLUD1P00367 558 aa13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 KRT18P05783 430 aaKnown RBP13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 SYT1P21579 422 aa13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 GRM5P41594 1212 aa13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 MATR3P43243 847 aaKnown RBP eCLIP13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 CACNB1Q02641 598 aaPredicted RBP13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 FAM171A1Q5VUB5 890 aa13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 GPBP1Q86WP2 473 aa13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 RNF168Q8IYW5 571 aaPredicted RBP13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 INTS4Q96HW7 963 aaKnown RBP13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 CDT1Q9H211 546 aa13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 CXCL16Q9H2A7 254 aa13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 ZHX3Q9H4I2 956 aa13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 RXFP1Q9HBX9 757 aa13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 MAN1C1Q9NR34 630 aa13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 CHST7Q9NS84 486 aa13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 LARSQ9P2J5 1176 aaKnown RBP13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 CLIC4Q9Y696 253 aa13.57□□□□□ -0.24
CDC42BPB-202ENST00000558321 H0YCG3 227 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 K7ELQ4 463 aaPredicted RBP13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 B3GAT3O94766 335 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 FAM13AO94988 1023 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 KIF4AO95239 1232 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 EFEMP2O95967 443 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 SPATA31D3P0C874 917 aa13.56□□□□□ -0.24
CDC42BPB-202ENST00000558321 MCF2P10911 925 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms